prot_L-elsbetiae_contig12724.2194.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12724.2194.1
Unique Nameprot_L-elsbetiae_contig12724.2194.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length98
Homology
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BLAST of mRNA_L-elsbetiae_contig12724.2194.1 vs. uniprot
Match: D8LDJ3_ECTSI (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDJ3_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.820e-12
Identity = 36/43 (83.72%), Postives = 38/43 (88.37%), Query Frame = 0 
Query:   30 YDEDEDAYLVPSDWEDDGNDEDWDAGGTSGRRARDLQKNLTAS 72
            +DEDEDAYLVPSDWED     DW+AGGTSGRRARDLQKNLTAS
Sbjct:   23 FDEDEDAYLVPSDWEDXXXXXDWNAGGTSGRRARDLQKNLTAS 65
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12724.2194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDJ3_ECTSI1.820e-1283.72DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12724contigL-elsbetiae_contig12724:1420..4855 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12724.2194.1mRNA_L-elsbetiae_contig12724.2194.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12724 1419..4855 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12724.2194.1 ID=prot_L-elsbetiae_contig12724.2194.1|Name=mRNA_L-elsbetiae_contig12724.2194.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=98bp
PKTHWAAEEGYHTMSKRRKSSSRNRGGGGYDEDEDAYLVPSDWEDDGNDE
DWDAGGTSGRRARDLQKNLTASGGGSKGGAGKSKSSKQQQQQQQQKNR
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