prot_L-elsbetiae_contig1272.2183.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1272.2183.1
Unique Nameprot_L-elsbetiae_contig1272.2183.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length907
Homology
BLAST of mRNA_L-elsbetiae_contig1272.2183.1 vs. uniprot
Match: D7FUF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF1_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 1.510e-103
Identity = 189/246 (76.83%), Postives = 203/246 (82.52%), Query Frame = 0
Query:  238 MQGKKRDRIGGSTTHMDGMGSFTAIGGIKAGEKSVTAFESEDCSTALAVAKFKAFAKPGGSSYVVNDRIDDDETLRNRFRNAGVRYRTFPIREGEAYLVPSGCLHEFMNVVPCLSVAWNIMPHPSNCNVAMDMAEASARETEEELGVDTDRSLSAIEHAPPESMRERNAAWVIKTGLQRSILLRRRXXXXXXXXXXXXXXDGRDA-TSDSLSAQARKLAGQEAARHKIPRNMWKKFLFHRPVGHYY 482
            MQGK RDRIGGSTTHMDGMGSFTAIGG+KAGEKSVTAFESEDC+TALAVAKFKAFAKPGGSSYVVNDRIDDD TLRNR   AGVRYRTFPIREGEAYLVPSGCLHEFMNV+PCLSVAWNIMPHP+NC VAM MAEASA E + ELGV+TDRS SAIEHAPPESMRER+AAWVIKT L+R ILLRRR               GR    S   +A++ K A + AARHK+P +MWKKFLF RP  HYY
Sbjct:    1 MQGKGRDRIGGSTTHMDGMGSFTAIGGLKAGEKSVTAFESEDCATALAVAKFKAFAKPGGSSYVVNDRIDDDATLRNRLHRAGVRYRTFPIREGEAYLVPSGCLHEFMNVIPCLSVAWNIMPHPANCEVAMRMAEASAEEAQAELGVNTDRSASAIEHAPPESMRERHAAWVIKTALERGILLRRRWASDPGSAGSSGG--GRVCGPSRPPTAESNKAAAEAAARHKLPADMWKKFLFMRPSEHYY 244          
BLAST of mRNA_L-elsbetiae_contig1272.2183.1 vs. uniprot
Match: A0A6H5KVS1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVS1_9PHAE)

HSP 1 Score: 337 bits (864), Expect = 3.430e-94
Identity = 172/228 (75.44%), Postives = 187/228 (82.02%), Query Frame = 0
Query:  256 MGSFTAIGGIKAGEKSVTAFESEDCSTALAVAKFKAFAKPGGSSYVVNDRIDDDETLRNRFRNAGVRYRTFPIREGEAYLVPSGCLHEFMNVVPCLSVAWNIMPHPSNCNVAMDMAEASARETEEELGVDTDRSLSAIEHAPPESMRERNAAWVIKTGLQRSILLRRRXXXXXXXXXXXXXXDGRDA-TSDSLSAQARKLAGQEAARHKIPRNMWKKFLFHRPVGHYY 482
            MGSFTAIGG+KAGEKSVTAFESEDC+TALAVAKFKAFAKPGGSSYVVNDRIDDD TLRNRF  AGVRYRTFPIREGEAYLVPSGCLHEFMNV+PCLSVAWNIMPHP+NC VAM MAEAS  E + ELGV+TDRS SAIEHAPPESMRER+AAWVIKT L+R ILLRRR               GR+   S   +A++ K A + AARHK+P +MWKKFLF RP  HYY
Sbjct:    1 MGSFTAIGGLKAGEKSVTAFESEDCATALAVAKFKAFAKPGGSSYVVNDRIDDDATLRNRFHRAGVRYRTFPIREGEAYLVPSGCLHEFMNVIPCLSVAWNIMPHPANCEVAMRMAEASVEEAQAELGVNTDRSASAIEHAPPESMRERHAAWVIKTALERGILLRRRWASDPDSRSGGSSGGGRECGPSRPPTAESNKAAAETAARHKLPADMWKKFLFMRPSEHYY 228          
BLAST of mRNA_L-elsbetiae_contig1272.2183.1 vs. uniprot
Match: D7FUF2_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF2_ECTSI)

HSP 1 Score: 297 bits (761), Expect = 9.530e-86
Identity = 149/195 (76.41%), Postives = 167/195 (85.64%), Query Frame = 0
Query:    5 HREAAEAAEAESAQARRYGFAVASVQVPPVSHPPAGILPFLDVESIEDTGFRLARLTREDCSFMGPDCVVAKVDLCWKHRIFAIVEGAFDPQKQALMDFLGDRKGLPCKISGKAASGEASSTMGDFRSKLADRTRKDKPQ---KDSPGTFFLDTASGQADILNWLGEDPLMGGLMPEATRGGLVDHLGGERCKFG 196
            HRE A AA AES  ARR+GF+VA+V++PPV  PPAGILPFLDV++I+DTGFRLAR +REDCSFMGPDCVVAKVDLCWKHRIFAIVEGAFDPQ Q LMDFL +RK L CK+SGKAASGEASSTMGD+RSKLADR R  K     KD+PGTFFLDT +GQAD+LNWL  DPLM GL+PEA RGGL +H+ GERCKFG
Sbjct:  451 HRETAAAAAAESKAARRHGFSVAAVEIPPVCCPPAGILPFLDVDAIKDTGFRLARFSREDCSFMGPDCVVAKVDLCWKHRIFAIVEGAFDPQIQPLMDFLQERKSLACKLSGKAASGEASSTMGDYRSKLADRIRDGKESAKAKDNPGTFFLDTTTGQADVLNWLPTDPLMKGLIPEAERGGLAEHIHGERCKFG 645          
BLAST of mRNA_L-elsbetiae_contig1272.2183.1 vs. uniprot
Match: L1K4C4_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K4C4_GUITC)

HSP 1 Score: 178 bits (452), Expect = 1.910e-42
Identity = 121/376 (32.18%), Postives = 196/376 (52.13%), Query Frame = 0
Query:   38 PAGILPFLDVESIEDTGFRLARLTREDCSFMGPDCVVAKVDLCWKHRIFAIVEGAFDPQKQALMDFLGDRKGLPCKISGKAASGEASSTMGDFRSKLADRTRK----DKPQKDSPGTFFLDTASGQADILNWLGEDPLMGGLMPEATRGGLVDHLGGERC-KFGPFTFGGGRNFPFLESTDAAGTDGAAAAWAAGGYAKKSQRLNMQGKKRDRIGGSTTHMDGMGSFTAIGGIKAGEKSVTAFESEDCSTALAVAKFKAFAKPGGSSYVVNDRID-----DDET--LRNRFRNAGVRYRTFPIREGEAYLVPSGCLHEFMNVVPCLSVAWNIMPHPSNCNVAMD----MAEASARETEEELGVDTDRSLSAIEHAP 397
            P  + PFL V  +  + F L R++ +    M    + + ++   +HR+F I+EGAF+  K  +  +L DR     ++SG+   GE  + +G + S +    +     +     + GTF         D + +L    +    +P      L D L  E+  ++GP+ FGG +      S +AA  D  +            +R+  +G K+D +GGST H+DGMGS  AIGG+K G+K VTA E+ D S AL +A FK++AKPGGSS++ ND +D     ++E+  L++ +  + VR+ TF I  G+AY++P+G  HEF+N  P LS+AWNI+P     + +      +   +  + E +     DR +SAI+HAP
Sbjct:   60 PEILRPFL-VSPLAGSNFNLCRISFKQMMAMTSSELESAINAAMEHRVFLIMEGAFEVLKTNMDKWLSDRSSFVAQLSGRDRKGELCTELGSYLSAMRSYEKGLSNFECAWSGALGTFTCKNIMLYQDDMLFLNTHDVFSKFLPWGRASLLRDSLDSEQSMQYGPYLFGGDK---MRGSCEAAAKDALSNQECQFEPLMSKRRVRYRGDKKDGLGGSTMHLDGMGSLVAIGGLKCGKKLVTAVEACDASLALKIAGFKSYAKPGGSSFLTNDPVDRSFSGEEESCSLKDLWTMSHVRWGTFEISAGDAYVIPAGMPHEFLNQEPSLSIAWNILPSCEQSSASEPWHFLLLLQALHDVETDFSGSPDRMMSAIDHAP 431          
BLAST of mRNA_L-elsbetiae_contig1272.2183.1 vs. uniprot
Match: A0A7S3Y1V6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1V6_HETAK)

HSP 1 Score: 160 bits (404), Expect = 2.910e-39
Identity = 109/333 (32.73%), Postives = 163/333 (48.95%), Query Frame = 0
Query:   71 DCVVAKVDLCWKHRIFAIVEGAFDPQKQALMDFLGDRKGLPCKISGKAASGEASSTMGDFRSKLADRTRKDKPQKDSPGTFFLDTASGQA-DILNWLGEDPLMGGLMPEATRGGLVDH--LGGERCKFGPFTFGGGRNFPFLESTDAAGTDGAAAAWAAGGYAKKSQRLNMQGKKRD--RIGGSTTHMDGMGSFTAIGGIKAGEKSVTAFESEDCSTALAVAKFKAFAKPGGSSYVVNDRIDDDETLRNRFRNAGVRYRTFPIREGEAYLVPSGCLHEFMNVVPCLSVAWNIMPHPS-NCNVAMDMAEASARETEEELGVDTDRSLSAIEHAP 397
            D +V  +  C ++ +F ++EGAF      LM++L   KG+   +SG+   GE  +T+  F ++L+D  R +  Q  + G F    A+ Q  D+ N  GE  L    +P     GL +   + G R ++GP TFGG                             KS+ +  + K+    + GGST HMDGMG+  A GG+K G K +TA   ED   AL  A F  +AKPGGS ++VN  I     +R  +   G+R+  F +++G+AY++P+G  HEF N+ P +SVAWN +P P      A  +   S  E  E L     R   A++ AP
Sbjct:    8 DKLVHLIRECEQNGVFMVIEGAFLNHTVNLMEWLESNKGISTDVSGRDQRGERHATLEAFATRLSDADRANARQDGNVGNFSYFEANKQLEDLGNIAGEKWLFARFLPWGDLSGLAEFTAIDGHRTRYGPSTFGG----------------------------DKSREVAQKSKRGTGFQFGGSTMHMDGMGTTVACGGMKDGLKLITAVAPEDAPQALRAAGFTTYAKPGGSRHLVNPPIGP--AVRRLWARLGIRFACFELKKGDAYVIPAGVPHEFQNLEPSVSVAWNYLPSPGFQSAAACSLLAYSLAELRENLQRQPQRQQEALDFAP 310          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1272.2183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FUF1_ECTSI1.510e-10376.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVS1_9PHAE3.430e-9475.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUF2_ECTSI9.530e-8676.41PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
L1K4C4_GUITC1.910e-4232.18Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A7S3Y1V6_HETAK2.910e-3932.73Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.650coord: 238..357
e-value: 1.1E-5
score: 26.9
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 248..367
IPR000637HMG-I/HMG-Y, DNA-binding, conserved sitePROSITEPS00354HMGI_Ycoord: 604..614

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1272contigL-elsbetiae_contig1272:1024..9212 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1272.2183.1mRNA_L-elsbetiae_contig1272.2183.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1272 1024..9213 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1272.2183.1 ID=prot_L-elsbetiae_contig1272.2183.1|Name=mRNA_L-elsbetiae_contig1272.2183.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=907bp
DETAHREAAEAAEAESAQARRYGFAVASVQVPPVSHPPAGILPFLDVESI
EDTGFRLARLTREDCSFMGPDCVVAKVDLCWKHRIFAIVEGAFDPQKQAL
MDFLGDRKGLPCKISGKAASGEASSTMGDFRSKLADRTRKDKPQKDSPGT
FFLDTASGQADILNWLGEDPLMGGLMPEATRGGLVDHLGGERCKFGPFTF
GGGRNFPFLESTDAAGTDGAAAAWAAGGYAKKSQRLNMQGKKRDRIGGST
THMDGMGSFTAIGGIKAGEKSVTAFESEDCSTALAVAKFKAFAKPGGSSY
VVNDRIDDDETLRNRFRNAGVRYRTFPIREGEAYLVPSGCLHEFMNVVPC
LSVAWNIMPHPSNCNVAMDMAEASARETEEELGVDTDRSLSAIEHAPPES
MRERNAAWVIKTGLQRSILLRRRRAAAAAAAGAGAGADGRDATSDSLSAQ
ARKLAGQEAARHKIPRNMWKKFLFHRPVGHYYGIAAEPAVQARRRQVVRP
AVKVAAPAPVITGGAKAAGRGAKSTKSARPSSENRLEGGESAAREVVKAS
MPGRKTAAGRSSVAMPVETPTWPEGMERVVRQLVEADMAGAKMAAGGNSV
ATPAKKRGRGRPRKYPKVTSPPPSPQPQPQPQPQQELRQESEEMVETTTT
ATALPCKEMAPPAPLPQKKKEKTVPPKVKTKASSRGAPQERRVARPASSN
ATSVPQEPTIHANLVGSTRQSPEADAVSPEWPPHFFLPPLGSLEMAGARS
SLQASSAVAMPPLSPADGVPYQDMPYQDMQYQDMQYQDMQYQDPPPSAFG
IPSSISLLGTPPAVPSPQPPPPPPDNGGIDRGEIYSAGYVDAPPPLAPGP
HQPFAGTNRLGSPSSDSQDSKDWQLREPPPPPSAPSCNEVFPTSSQAGIQ
NPDRIVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000637HMGI/Y_DNA-bd_CS