prot_L-elsbetiae_contig12702.2171.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12702.2171.1
Unique Nameprot_L-elsbetiae_contig12702.2171.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length204
Homology
BLAST of mRNA_L-elsbetiae_contig12702.2171.1 vs. uniprot
Match: D8LD46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD46_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 4.330e-47
Identity = 120/192 (62.50%), Postives = 134/192 (69.79%), Query Frame = 0
Query:    1 RPSSKSGHGATLAVEVAAHEIALSATPTALSWALLSLLADGGVGVGVGADSGAGGTPGARRRGQGHLLPRSRDKYPTPGTPGVDVRRVGRRITTRWATLLDIFHARWRGFGAALLVRLVEALLGNAASPSPXXXXXXXXXXXXXPNDASRPGVAGISSXXXXXXXXXXXXXXXXX----LERQAAFIEIWVR 188
            R SS + +  T A+EVAAHEIALSATPTALSWA+++LLADGG     G   G     G   R QGHLLPRSRDKYPTPGTPGVD R+V RR++ RWATLLD+FH+RWRGFGAALLVRLVEALL N +S                P +A      G S+ XXXXXXXXXXXXXXXX    LERQAAFIEIW R
Sbjct:   63 RGSSAASNPGTAAMEVAAHEIALSATPTALSWAVVALLADGG-----GRVRGGDFVGGVGGREQGHLLPRSRDKYPTPGTPGVDSRQVSRRLSARWATLLDMFHSRWRGFGAALLVRLVEALLDNDSST---------------PGEAVNADDDGTSACXXXXXXXXXXXXXXXXXXXXLERQAAFIEIWAR 234          
BLAST of mRNA_L-elsbetiae_contig12702.2171.1 vs. uniprot
Match: A0A6H5JW11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW11_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 1.540e-43
Identity = 120/192 (62.50%), Postives = 132/192 (68.75%), Query Frame = 0
Query:   13 AVEVAAHEIALSATPTALSWALLSLLADGGVGVGVGADSGAGGTPGARRRGQGHLLPRSRDKYPTPGTPGVDVRRVGRRITTRWATLLDIFHARWRGFGAALLVRLVEALLGNAASPSPXXXXXXXXXXXXXPNDASRPGVAGISSXXXXXXXXXXXXXXXXXLERQAAFIEIWVRHLLSRRWHLRGGDVSV 204
            A+EVAAHEI LSATPTALSWA++SLLADGG    V  +   GG  G + RGQGHLLPRSRDKYPTP      VR +G      WATLLD+FH+RWRGFGAALLVRLVEALL NA+S +P               +A   G +      XXXXXXXXXXXXXX LERQAAFIEIWV HLLSRRWHLR  D  V
Sbjct:  260 AMEVAAHEIVLSATPTALSWAVVSLLADGGGR--VRGEYFVGGVGGTKGRGQGHLLPRSRDKYPTP------VRGLGGGW---WATLLDMFHSRWRGFGAALLVRLVEALLDNASS-TPGAAV-----------NADENGRSACGGGNXXXXXXXXXXXXXXGLERQAAFIEIWVNHLLSRRWHLRTSDARV 428          
BLAST of mRNA_L-elsbetiae_contig12702.2171.1 vs. uniprot
Match: D7FGU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU4_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 1.160e-26
Identity = 66/97 (68.04%), Postives = 75/97 (77.32%), Query Frame = 0
Query:    3 SSKSGHGATLAVEVAAHEIALSATPTALSWALLSLLADGGVGVGVGADSGAGGTPGARRRGQGHLLPRSRDKYPTPGTPGVDVRRVGRRITTRWATL 99
            SS +      A+EVAAHEIALSATPTALSWA+++LLADGG  VG G D   GG  G + RGQGHLLPRSRDKYPTPGTPGVD R+V RR+T R +TL
Sbjct:  235 SSAASKPGAAAMEVAAHEIALSATPTALSWAVVALLADGGGRVG-GGDC-VGGVSGTKGRGQGHLLPRSRDKYPTPGTPGVDSRQVSRRLTARCSTL 329          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12702.2171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LD46_ECTSI4.330e-4762.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JW11_9PHAE1.540e-4362.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGU4_ECTSI1.160e-2668.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12702contigL-elsbetiae_contig12702:2890..5123 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12702.2171.1mRNA_L-elsbetiae_contig12702.2171.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12702 2890..5123 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12702.2171.1 ID=prot_L-elsbetiae_contig12702.2171.1|Name=mRNA_L-elsbetiae_contig12702.2171.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=204bp
RPSSKSGHGATLAVEVAAHEIALSATPTALSWALLSLLADGGVGVGVGAD
SGAGGTPGARRRGQGHLLPRSRDKYPTPGTPGVDVRRVGRRITTRWATLL
DIFHARWRGFGAALLVRLVEALLGNAASPSPPPSPPPPPPHLPPPNDASR
PGVAGISSGSGGSGGGGGGGGGGGGLERQAAFIEIWVRHLLSRRWHLRGG
DVSV
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