prot_L-elsbetiae_contig12689.2164.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12689.2164.1
Unique Nameprot_L-elsbetiae_contig12689.2164.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length632
Homology
BLAST of mRNA_L-elsbetiae_contig12689.2164.1 vs. uniprot
Match: A0A6H5J8Y2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y2_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 3.780e-18
Identity = 247/675 (36.59%), Postives = 283/675 (41.93%), Query Frame = 0
Query:    1 DPEEDTNVLRAVKVGFHGWGPVMDAWFPVDGGMVAKPGTHLPL------VTAAXXXXXXXXXXXXXXXXXXXXPNGIVV--SSERDGGIDGDGLAPAKGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEDRREAKRAAAAEARYGGVTGYVGG--AKSTAAAPG----------RTRSDSGDASXXXXXXXXXXXXXXXXXXXGYSEGNR-GKQTKTAASYRQQRRVSGXXXXXXXGPK-------LGTIASRLRCTNSGGGA-GGVENGVXXXXXXXXXXXXXXXXXXXGRASVVVHPHQGKTTPHARDCHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAATSPSAYGRRN-GRVVGVANDMGGSSRWANDRLSSSSSAXXXGDGXXXXXXXXXXXXXKSGCLSSLSMPPAVTPTAATTXXXXXXXXXXXXXXXXXXXXXXXXXPRTARSGPWTTAITSLSATASATAAYGVSALGRISPTLTNRFGAGGASTSPTPPPA-------QLPEANHGAAGGQQAPNDVGGMSLAGXXXXXXXXXXXXXXXXVDGG-------VGDGVIVPSGXXXXXXXTPLAXXXXXXXXLXXXSAPAXXXXXXXXXAAXXXXXPPHPSGFAANVRASATNGLKVVFRRS 631
            DP+ DTNVLRAVKV F G GP MDAW  +DGGMVA+PGTHLPL      +T        XXXXXXXXXXX   P  I          G+D      + GAA                 XXXXXXXXX         + +DRR+ KR AA    +GGV GYV G  A   AAA G          R   DSG+ S    XXXXXXXXXX       +E N  G+  KTAAS+RQ      XXXXXXX          L TIA+R R T  GGG+   V  G                    G A V                H                                                     + +SPS +GRR+ GRV G++N  G     A D  S +S                XXXXX           PA   ++ +T     XXXXXXXXXXXXXXXXX   PRT   GPW +A+T+   + SATA      LGRISPTLTNRF A G S + TP  A       +L ++N+GA GG       G   LA                   GG        G GV   +G                   L    A A    XXXXX A      P PSGFAANVRASATNGLKVVFRRS
Sbjct:  780 DPKTDTNVLRAVKVSFEGSGPAMDAWCSIDGGMVAQPGTHLPLSKRQRALTTRKASVAAXXXXXXXXXXXGAKPIRIRAFHRPRPPPGMDSTSAVSSNGAANGSASADCGKAPVQGGAXXXXXXXXXTG-------SSDDRRQGKRPAADGEGFGGVAGYVDGETAAVAAAATGGMVPRCALRARAGIDSGNESSSSIXXXXXXXXXX-------NEVNATGRPRKTAASFRQXXXXXXXXXXXXXXXXXXXXXXGLDTIATRFRGTGDGGGSVKAVSPGEAVSKEAGMTGDRRVGRRGRGGAVVQXXXXXXXXXXXXXXNHYFPSDPLSSRRTMPLGRGPSPPGDVVVPNGSVPAAVVAASP------------SPSSPSPFGRRSSGRVAGLSNGTGVGGGTAKDLRSVNSGGGGESGVNTSKGGASXXXXXXXXXXXXXLSTPAPGLSSFSTPPLSTXXXXXXXXXXXXXXXXXNGSPRTP--GPWASAVTTTLTSWSATA------LGRISPTLTNRFVAAGTSPAATPATAAAGASAARLTDSNNGAVGGGHNAGQPGIGELANDAAVVGSNVVPPSCCDALGGGVKANPHSGAGVAATNGQAAICST------------LAPRDAAAVPTTXXXXXXAPVVGASPTPSGFAANVRASATNGLKVVFRRS 1408          
BLAST of mRNA_L-elsbetiae_contig12689.2164.1 vs. uniprot
Match: D8LIR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR9_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 1.560e-10
Identity = 35/43 (81.40%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 DPEEDTNVLRAVKVGFHGWGPVMDAWFPVDGGMVAKPGTHLPL 43
            DP++DTNVLRAVKV F G GP MDAW  VDGGMVAKPGTHLPL
Sbjct:  751 DPKKDTNVLRAVKVSFEGSGPAMDAWCSVDGGMVAKPGTHLPL 793          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12689.2164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J8Y2_9PHAE3.780e-1836.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIR9_ECTSI1.560e-1081.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31906:SF17PLASTID-LIPID-ASSOCIATED PROTEIN 2, CHLOROPLASTIC-RELATEDcoord: 44..511
IPR039633Plastid-lipid-associated proteinPANTHERPTHR31906FAMILY NOT NAMEDcoord: 44..511

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12689contigL-elsbetiae_contig12689:946..4934 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12689.2164.1mRNA_L-elsbetiae_contig12689.2164.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12689 946..4934 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12689.2164.1 ID=prot_L-elsbetiae_contig12689.2164.1|Name=mRNA_L-elsbetiae_contig12689.2164.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=632bp
DPEEDTNVLRAVKVGFHGWGPVMDAWFPVDGGMVAKPGTHLPLVTAAAAA
AAAAAAAAAAAAAAAAAPNGIVVSSERDGGIDGDGLAPAKGAAATAASAA
AAAAAAARFRGAGGRGRGGSAAAKRKRPAPEDRREAKRAAAAEARYGGVT
GYVGGAKSTAAAPGRTRSDSGDASSTSTSSSSSTSSDNESSYSGYSEGNR
GKQTKTAASYRQQRRVSGGGGVGGGGPKLGTIASRLRCTNSGGGAGGVEN
GVGAGGGGGGDRSSDGRGRPRGRASVVVHPHQGKTTPHARDCHHHNNHDN
HHANSSSSCSSSSACSASSRTVPVPPGSPPRALPNGGGSGPLASSAAATS
PSAYGRRNGRVVGVANDMGGSSRWANDRLSSSSSAGGGGDGNGGDGNGGG
GSGGKSGCLSSLSMPPAVTPTAATTAAAAAAAISAAAGDGDGDGDGDGDG
PRTARSGPWTTAITSLSATASATAAYGVSALGRISPTLTNRFGAGGASTS
PTPPPAQLPEANHGAAGGQQAPNDVGGMSLAGGGGGGGGGGGGGGGGGVD
GGVGDGVIVPSGSGQPPPPTPLASPPPSSPPLPPPSAPAPLPSPSPLTAA
AVASPPPHPSGFAANVRASATNGLKVVFRRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039633PAP