prot_L-elsbetiae_contig1268.2160.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1268.2160.1
Unique Nameprot_L-elsbetiae_contig1268.2160.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length454
Homology
BLAST of mRNA_L-elsbetiae_contig1268.2160.1 vs. uniprot
Match: A0A6H5JLH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH3_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 4.130e-68
Identity = 214/542 (39.48%), Postives = 251/542 (46.31%), Query Frame = 0
Query:   37 VVGSATFLVAVTGLLAPLPVPP-----HTPRRRAPP---------------------AR--------------------NAA-----NGKGYGSFDASAWKNIASSSPAXXXXXXXXXXXXXXAGTVGALPTGNTP-AIRNEAN-----EGG--GGEQVIDVDVGKLPTFVFFFGAGDGKPWREDVVGGGNARACEAKLQQVLASASS-----------------LEGASAGEGQRRVDVVRGE--------GLATGEHR-DGVADTFSSGDRGGGNGGISSASNKTNN--NFLEICSKDDLLRVLAKQRKGQGPVVVMYHAPWCRKCAYLTPVFRRLAAARMLATGGGQAAARGGGVGGITSET-STDGPIFCRVDVSHTSWGGR-----VESGPTDAATEGP----------------------------LAAGGYRGVSGIGGG--AATSMSPDGT--PGAAAVGEAEKRFLHTGSPAMENCDVCMKSGFVPCGECEGKGAVVRSSPXXXXXXXXXXXXCVGYXXXXXXXXGGKCYMCD 453
            V+GSATFLVAV+GLL P  VPP       P   APP                     AR                    NAA     +G G+G FDA AWKN+ SS P                  V A PT   P A++  AN     EGG  G E+ I V V KLPTFVFF    +G+  RE+V GG +AR C  KL++ LAS SS                 L  + AGEG     V R          G A G +R D   DT      G GNGG+ +  + T +  N +EI  K +LLRVL  + +GQGPVVVMYHAPWCRKCAYL PVFRRLAAA+  + G  +A       GG +S+  S+ GP+FCRVDVS  SWG R         P   A+EG                             +AAG      G+G G  AA  M+ D T  P  A    AE   LH GS A+ENCDVC  SGFVPCGEC G GAV R+SP            CVGY        GGKCYMCD
Sbjct:    7 VLGSATFLVAVSGLLDPPLVPPIGLSPFHPSAPAPPPSLFRSDKRRGSFCGGPLASTARMRKRCLQAGNESPGTGDEGVNAAAAGRRHGSGHGMFDADAWKNMPSSPPL-----------------VTAPPTSLNPSAVQLSANGALDDEGGVEGREEPISVYVDKLPTFVFFV-RDNGRHRREEVTGGRDARTCATKLRERLASISSPGSTWTNSGSLDDNDSPLRPSGAGEGGVGGGVARTRSDGAAVVGGAAEGPNRLDNETDTG----MGRGNGGMGAIVDGTGSPTNIVEISDKRELLRVLGARGEGQGPVVVMYHAPWCRKCAYLAPVFRRLAAAQATSVGVTKA-------GGSSSDRGSSGGPLFCRVDVSDPSWGRRRAVRGSSVAPATVASEGTAAXXXXXXXXXXXXXXXXXVRRARNKASIAAGASSQARGLGVGDRAAGLMAADATATPANAEGKIAETELLHAGSQAVENCDVCGGSGFVPCGECGGLGAVSRASPDGKHTMAVTCSSCVGYKRLRCPSCGGKCYMCD 519          
BLAST of mRNA_L-elsbetiae_contig1268.2160.1 vs. uniprot
Match: D7FW10_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW10_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 2.620e-51
Identity = 211/527 (40.04%), Postives = 251/527 (47.63%), Query Frame = 0
Query:   37 VVGSATFLVAVTGLLAPLPVPPH--TPRRRAPP------------------------AR--------------------NAA-----NGKGYGSFDASAWKNIASSSPAXXXXXXXXXXXXXXAGTVGALPTGNTPAI----RNEANEGGGGEQ---VIDVDVGKLPTFVFFFGAGDGKPWREDVVGGGNARACEAKLQQVLASASSLEGA--SAGEGQRRVDVVRGEGLATGEHRDGVADTFSSG-----------DR---------GGGNGGISSASNKTNN--NFLEICSKDDLLRVLAKQRKGQGPVVVMYHAPWCRKCAYLTPVFRRLAAARMLATGGGQAAARGGGVGGITSETSTDGPIFCRVDVSHTSWGGR-----VESGPTDAATEGP-------------------LAAGGYRGVSGIGGG--AATSMSPDGTPGAA-AVGE-AEKRFLHTGSPAMENCDVCMKSGFVPCGECEGKGAVVRSSPXXXXXXXXXXXXCVGYXXXXXXXXGGKCYMCD 453
            V+GSATFLVAV+GLL P  VPP+  +P R + P                        AR                    NAA     +G G+  FDA AWKN+ SS P                  V A PT   P+      N+A +G G E+     +VDV KLPTFVFF     G+  RE+V+GG +AR C  +L + LAS SS      ++G        +R  G   G    G A T S G           DR         G G+G + +  + T N  N +EI  K DLLRVL    +GQGPVVVMYHAPWCRKCAYLTPVFRRLAAA+  + G      R GG G      S++GP+FCRVDVSH SWG R         P+  A+ G                    +AAG      G+G G  AA  ++ D T   A A G  AE   LH GS A+ENCDVC  SGFVP               XXXXXXXXXXXX    XXXXXXXXGGKCYMCD
Sbjct:    7 VLGSATFLVAVSGLLDPPLVPPNGLSPLRPSAPNPPPSLFQSDTHRGYYCAGPLASTARRRKRCLQAGNESPGTGGEGVNAAAGGRRHGSGHSMFDADAWKNMPSSPPP-----------------VTAPPTSLNPSAVQLSSNDALDGEGEEEREEPTNVDVEKLPTFVFFV-RDKGRHRREEVIGGRDARTCATELSERLASISSPGSTWTNSGSLDDNDSPLRPSGAGEGGVGGGAARTSSDGAAVVGGAAEGPDRLDYETDTGMGRGSGDMVANVDGTGNPTNIVEISDKRDLLRVLGALGEGQGPVVVMYHAPWCRKCAYLTPVFRRLAAAQAPSAG-----VREGG-GSSIERGSSEGPLFCRVDVSHPSWGRRRAVRGASVAPSTVASAGTAAXXXXXXXXXXXXPNTAAIAAGASSQAQGLGFGDRAAGWVAADATTATAEAEGTIAETELLHAGSQAVENCDVCGGSGFVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKCYMCD 509          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1268.2160.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JLH3_9PHAE4.130e-6839.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FW10_ECTSI2.620e-5140.04Serine/threonine protein kinase n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 232..294
e-value: 6.2E-7
score: 31.3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..453
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..26
NoneNo IPR availableTMHMMTMhelixcoord: 26..48
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 236..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1268contigL-elsbetiae_contig1268:9959..11874 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1268.2160.1mRNA_L-elsbetiae_contig1268.2160.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1268 9959..11874 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1268.2160.1 ID=prot_L-elsbetiae_contig1268.2160.1|Name=mRNA_L-elsbetiae_contig1268.2160.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=454bp
RRRRPTRGLWSGRKDKKTRDSSDSPSLFNHVMAGAIVVGSATFLVAVTGL
LAPLPVPPHTPRRRAPPARNAANGKGYGSFDASAWKNIASSSPASSSSSS
SSSSSSSSAGTVGALPTGNTPAIRNEANEGGGGEQVIDVDVGKLPTFVFF
FGAGDGKPWREDVVGGGNARACEAKLQQVLASASSLEGASAGEGQRRVDV
VRGEGLATGEHRDGVADTFSSGDRGGGNGGISSASNKTNNNFLEICSKDD
LLRVLAKQRKGQGPVVVMYHAPWCRKCAYLTPVFRRLAAARMLATGGGQA
AARGGGVGGITSETSTDGPIFCRVDVSHTSWGGRVESGPTDAATEGPLAA
GGYRGVSGIGGGAATSMSPDGTPGAAAVGEAEKRFLHTGSPAMENCDVCM
KSGFVPCGECEGKGAVVRSSPDGKHTVAVTCPACVGYKRLRCPSCGGKCY
MCD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf