prot_L-elsbetiae_contig1268.2159.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1268.2159.1
Unique Nameprot_L-elsbetiae_contig1268.2159.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length998
Homology
BLAST of mRNA_L-elsbetiae_contig1268.2159.1 vs. uniprot
Match: D7FW09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW09_ECTSI)

HSP 1 Score: 895 bits (2312), Expect = 1.280e-308
Identity = 564/1041 (54.18%), Postives = 665/1041 (63.88%), Query Frame = 0
Query:   10 AVPILKGDRAEVDLPVASRILGGESLFLQASRILMGLCFEALNQDKMAAEAYRQAWNALLEQRAARQTSRGNGGAFGD-GTGGRGKSSGKAKEETAIGRILLQAKLALTTGXXXXXXXXXXXXXXXXXXXXXXRNANPLSKGKKKPPIALLLPDSRDFGPGK---PYLTYPTARTRT--RASGRG--GDAAAPPSKKQAAAEEARILALGFGIWSKKPYTWFKLGQAVLEGGCYALALALLAKAAVLLPPGLQQQEKGRFSDAHAAAEEARDVEPFGKAVRLLCPRLMALHSEDARSQYTLESLSAVRVQRAWRGHRMVRVLRDVATKQVAALRIQRFMREWRRRNAQLAVRLVVASALELSRLGAPYAKGMGIATRAAASVRLQALVASAVAVQRAARVLVARRRISRRRESIAALQAFYRGCRARWALSTALEEAQSLRLXXXXXXXXXXXXXXXXXXX---------------------------RATTSLPLSLQGKEGAMPGNE-LLVGHGG--SMQVGKITRRDVPMDADRPEGFGPPNLAAFLWESPEEAYGPGFGAEDAGTAAPTR-APH--SEGEDHRSCVTEEGGNASDDENDGAVFELSANAVISTTSIRENDGKISSRAIRAS---CSLDERGG-KPPCFTEPSCSPTAPAQQQQLPLRWTPVAVAPREALERALRCSTLIVNSPSFDSACARRLLSRIGRPFPRPSSPPRGRTAADRQRTTPSTPGGKPGDREGFSSALASEENMGEDQTSWRH---LQGAGLRHIMLVGESPIGDGGLSELSSAVRCRFLPRLTTLVIGGPGCRVGPRGVMALALALSSPGCSQLRNLSMSNCCLGGKSWLARKNRRQQHYRR-----RNTSRNQARAPTSKTVAATHAAWDCFFRHLQRLPSLSTLSLQRCGLEDRDVRSLSVSLQILPAGRMRCLRLNGNCVGLSGLRMVVTALTSRRMRLPALWLRGQRPALAESGAKGVVEEAFRNGLFAEVEFERPFEVMGGRSQLVLMERTTESEGLGSRVRKHPTSNIYV 997
            +VP+++GDRAEVDLPVAS +LGGES+FLQ     MG CFE L QDKMAAEAYRQAWN LLEQR A     G G  F      G GK  G    +  IG IL QA+LAL                         + +   S  +++PP +   PD +  G G+   P     TA +    R  GRG  GD++   +KK+   + A+  ALGF +W K PYTWF  G+ VLEGGCYAL LA LAKA  LLP GL QQEKGRF DAH+AAEEARD++PFGKAVRLLCPRLMALHS DAR QYT ES SA+RVQRAWRGHR++RVL D+ +KQ AALRIQRFMREWR+    LA+RLV  SALELS+LGA Y K MG+A +AAA+ RLQAL ASA AVQRAARVL+A RR+SRR+E+IAALQAF RGCR RWALS A EE  SLRL                                              R  ++ PL  +  +G  P  E    G+    ++Q+G I RR+ PMDA   +GF PPNLAAFLWES EEAYG    A+D     PT   PH  +E E  RS V     ++  D  DGAVFE SA AV S+   RE+  ++ S         CS D+ GG +PP F E   SP +P    Q P RW P  VAP  A  RAL CSTLIVNSPSFDS+ ARRL SR+G+P P  +SPPR     + Q+      G   G R G +    +     E +   +H   L   GL+H++LVGESPIGDGGLSELSSAVRC +LPRLTTLVIGGPGC+VGPRGV ALA ALS+ GCSQL++LSMSNCCLG         R++Q         + +  N A     K  A  HAAWDCFFRHLQRLPSL+TLS+Q  GLE+RDVRSLS++LQILPA R+RCLRLNGNCVG SGLRM++TALTSRR RLPALWLR QRPAL ESGA+ + E AFR+GLFAEVEFERPFEVMGGRS L L+E TTE+E LG R  KHPTS+IY+
Sbjct:  142 SVPVIEGDRAEVDLPVASNVLGGESIFLQ-----MGFCFETLRQDKMAAEAYRQAWNTLLEQRHASAAPAGYGAVFAKTAKSGGGKEVGVVGVDE-IGAILRQAQLALAASSRSTSAAGGRSRDSTPEQQL--QRSKGTSSTERRPPSSGQQPDQQGVGGGRGGVPSSLPSTADSSCLGRGGGRGDHGDSSCGVTKKETVVDAAKARALGFELWCKNPYTWFSFGEVVLEGGCYALTLAFLAKAVALLPSGLHQQEKGRFGDAHSAAEEARDLDPFGKAVRLLCPRLMALHSVDARCQYTRESQSALRVQRAWRGHRVIRVLHDLVSKQTAALRIQRFMREWRKHGFILALRLVATSALELSKLGAKYTKAMGLAAQAAAADRLQALTASAEAVQRAARVLIAHRRVSRRKEAIAALQAFCRGCRLRWALSAAFEE--SLRLEYVAHDLRQQRDCGDGGREEGAYTCEEGVEPGPDREGVGNTDREGKRGPSAAPLRPRHGDGCKPHKEEAFAGYNAPLNVQLGVIARRNFPMDAGCAKGFRPPNLAAFLWESREEAYG-SCCADDGTDDNPTLLVPHLGNETESPRSYVDSAARSSHGD--DGAVFEASATAVASSA-CREDPVRMGSEQNEVDLGDCSPDQHGGGRPPAFDELPASPVSPLPLLQPP-RWVPATVAPEGAFHRALACSTLIVNSPSFDSSSARRLFSRMGKPIPA-ASPPRD----EPQQEADDVKGMAAGVRRGKADLNPTHGEEKEKRRLKKHPGCLHANGLKHVLLVGESPIGDGGLSELSSAVRCGWLPRLTTLVIGGPGCKVGPRGVAALATALSTSGCSQLQHLSMSNCCLG---------RQKQXXXXXXXGCKTSLLNPASVSAEKAAAEAHAAWDCFFRHLQRLPSLATLSIQDAGLENRDVRSLSIALQILPADRLRCLRLNGNCVGESGLRMLLTALTSRRRRLPALWLRRQRPALVESGARDIFEGAFRDGLFAEVEFERPFEVMGGRSHLALIECTTETEDLGRRALKHPTSHIYI 1153          
BLAST of mRNA_L-elsbetiae_contig1268.2159.1 vs. uniprot
Match: A0A6H5JP04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP04_9PHAE)

HSP 1 Score: 798 bits (2061), Expect = 4.200e-270
Identity = 544/1134 (47.97%), Postives = 641/1134 (56.53%), Query Frame = 0
Query:   10 AVPILKGDRAEVDLPVASRILGGESLFLQAS--------------------RI-------LMGLCFEALNQDKMAAEAYRQAWNALLEQRAAR------------------QTSRGNGGAFGD-GTGGRGKSSGKAKEETAIGRILLQAKLALTTGXXXXXXXXXXXXXXXXXXXXXXRNANPLSKGKKKPPIALLLPDSRDFGPGKPYLTYPTARTRTRASGRGGDAAAPPSKKQAAAEEARILALGFGIWSKKPYTWFKLGQAVLEGGCYALALALLAKAAVLLPPGLQQQEKGRFSDAHAAAEEARDVEPFGKAVRLLCPRLMALHSEDARSQ--YTLESLSAVRVQRAWRGHRMVRVLRDVATKQVAALRIQRFMREWRRRNAQLAVRLVVASALELS----------------------------------RLGAPYAKGMGIATRAAASVRLQALVASAVAVQRAARVLVARRRISRRRESIAALQAFYRGCRARWALSTALEE-------AQSLRLXXXXXXXXXXXXXXXXXXX------------------RATTSLPLSLQGKEGAMPGNELLVGHGG--SMQVGKITRRDVPMDADRPEGFGPPNLAAFLWESPEEAYGPGFGAEDAGTAAPTRAPH--SEGEDHRSCVTEEGGNASDDENDGAVFELSANAVISTTSIRENDGKISSRAIRAS---CSLDERGG-KPPCFTEPSCSPTAPAQQQQLPLRWTPVAVAPREALERALRCSTLIVNSPSFDSACARRLLSRIGRPFPRPSSPPRGRTAADRQRTTPSTPGGKPGDREGFSSALASEENMGEDQTSWRHLQGA----GLRHIMLVGESPIGDGGLSELSSAVRCRFLPRLTTLVIGGPGCRVGPRGVMALALALSSPGCSQLRNLSMSNCCLGGKSWLARKNRRQQHYRRRNTSRNQARAPTSKTVAATHAAWDCFFRHLQRLPSLSTLSLQRCGLEDRDVRSLSVSLQILPAGRMRCLRLNGNCVGLSGLRMVVTALTSRRMRLPALWLRGQRPALAESGAKGVVEEAFRNGLFAEV---------------------------EFERPFEVMGGRSQLVLMERTTESEGLGSRVRKHPTSNIYV 997
            +VP+++GDRAEVDLPVAS +LGGES+FLQA                     RI        MGLCFE L QDKMAAEAYRQAWN LLEQR A                   +T  G G  F      G GK  G  + +  IG IL QA+LAL                           +   + G+           SRD  P          +   R+ G         +K +   + A+  ALGF +W K PYTWF  G+ VLEGGCYAL LA LAKA  LLP GL QQEKGRF DAH+AAEEARD++PFGKAVRLLCPRLMALHS DAR Q  YT ES SA+RVQRAWRGHR++RVLRD+ +KQ+AA RIQRFMREWR+    LA+RL   SALEL                                   +LG  Y K MG+  +AAA+ RLQAL ASA AVQRAAR L+A RR+SRR+E+IAALQAF+RGCR RWALS A EE       A+ LR                                      R  ++  L  +  +G  P  +   G+    ++Q+G ITRR++PMD    +GF PPNLAAFLWES E+AYG     + A       APH   E E  RS V      +S   +D AVF  SA AV S+   RE+  ++ S         C  D+ GG +PP F E   SP +     Q P RW P  VAP  A  RAL CSTLIV+SPSFDSA ARRL SR+G+P P  +SPPR     + Q+ T    G   G R G      +     E +   +H  G     GL HI+L+GESPIGDGGLSELSSAVRC +LPRLTTLVIGGPGC+VGPRGV ALA ALS+ GCSQL++LSMSNCCLG      +  R            N A     K  A  HAAWDCFFRHLQRLPSL+TLS+Q  GLE+RDVRSLS++LQILPA R+RCLRLNGNCVG SGLRM++TAL SRR RLPALWLR QRPAL ESGA+ + E AFR+GLFAEV                           EFERPFEVMGGRS L L+ERTTE+E LG R  KHPTS+IY+
Sbjct:  142 SVPVIEGDRAEVDLPVASYVLGGESIFLQARLTKLASRTRYSLFESEPHRYRIRRSVTPNAMGLCFETLRQDKMAAEAYRQAWNTLLEQRHASAAPAGQKPXXXXXTGDPSKTRTGYGAVFAKTAKSGGGKEVGVVRVDE-IGAILRQAQLALAASS----------------------RSTSAAGGR-----------SRDSTP---------EQQLQRSGG--------VTKNKTIVDAAKARALGFELWCKNPYTWFNYGEVVLEGGCYALTLAFLAKAVALLPSGLLQQEKGRFGDAHSAAEEARDLDPFGKAVRLLCPRLMALHSVDARCQARYTRESQSALRVQRAWRGHRVIRVLRDLVSKQIAAFRIQRFMREWRKHGFILALRLAAISALELRQVVRRRRSRSWVWHERRAAWVDGEATLARIHAPPKLGTNYTKAMGLTAQAAAADRLQALAASAEAVQRAARALIAHRRVSRRKEAIAALQAFFRGCRLRWALSAAFEESLRIESVARDLRQQRDCGDGGREEGAHTCEEGVKPGLDPEGVGNTDREGKRGLSATSLRPRHGDGCKPHKDTFGGYNAPPNVQLGVITRRNLPMDVSCAKGFRPPNLAAFLWESREDAYGSRCADDGADDNTALLAPHLGKEKESPRSYVDAAVARSSHG-HDHAVFVASATAVASSA-CREDLARMGSEQNEVDLGDCLSDQHGGGRPPAFDELPASPVSALPLLQPP-RWVPATVAPEGAFHRALACSTLIVSSPSFDSASARRLFSRMGKPMPA-ASPPRD----EPQQETDDVKGMAAGVRRGQVDLNLTHGE--EKERLIKHPTGCLYANGLEHILLLGESPIGDGGLSELSSAVRCGWLPRLTTLVIGGPGCKVGPRGVAALATALSTSGCSQLQHLSMSNCCLG----RPKGRRXXXXXXXXXXXSNLASVSAEKAAAEAHAAWDCFFRHLQRLPSLATLSIQDAGLENRDVRSLSIALQILPADRLRCLRLNGNCVGESGLRMLLTALRSRRRRLPALWLRRQRPALVESGAREIFERAFRDGLFAEVKRVPHPMNIERIEGKFRAANRNTWWLVEFERPFEVMGGRSHLALIERTTETEDLGRRALKHPTSHIYI 1210          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1268.2159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW09_ECTSI1.280e-30854.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP04_9PHAE4.200e-27047.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 861..888
e-value: 7.0
score: 11.2
coord: 765..794
e-value: 8.4
score: 10.6
coord: 891..918
e-value: 2.7
score: 14.1
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 737..930
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 712..949
e-value: 4.0E-18
score: 66.8
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 411..440
score: 7.016
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 303..332
score: 6.742

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1268contigL-elsbetiae_contig1268:2005..8437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1268.2159.1mRNA_L-elsbetiae_contig1268.2159.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1268 517..8569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1268.2159.1 ID=prot_L-elsbetiae_contig1268.2159.1|Name=mRNA_L-elsbetiae_contig1268.2159.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=998bp
MVDPVAKEQAVPILKGDRAEVDLPVASRILGGESLFLQASRILMGLCFEA
LNQDKMAAEAYRQAWNALLEQRAARQTSRGNGGAFGDGTGGRGKSSGKAK
EETAIGRILLQAKLALTTGGGSSSNKGASGGSRGNTPPQQQRNANPLSKG
KKKPPIALLLPDSRDFGPGKPYLTYPTARTRTRASGRGGDAAAPPSKKQA
AAEEARILALGFGIWSKKPYTWFKLGQAVLEGGCYALALALLAKAAVLLP
PGLQQQEKGRFSDAHAAAEEARDVEPFGKAVRLLCPRLMALHSEDARSQY
TLESLSAVRVQRAWRGHRMVRVLRDVATKQVAALRIQRFMREWRRRNAQL
AVRLVVASALELSRLGAPYAKGMGIATRAAASVRLQALVASAVAVQRAAR
VLVARRRISRRRESIAALQAFYRGCRARWALSTALEEAQSLRLRPRGGGG
GGRDGAGEGEGSRATTSLPLSLQGKEGAMPGNELLVGHGGSMQVGKITRR
DVPMDADRPEGFGPPNLAAFLWESPEEAYGPGFGAEDAGTAAPTRAPHSE
GEDHRSCVTEEGGNASDDENDGAVFELSANAVISTTSIRENDGKISSRAI
RASCSLDERGGKPPCFTEPSCSPTAPAQQQQLPLRWTPVAVAPREALERA
LRCSTLIVNSPSFDSACARRLLSRIGRPFPRPSSPPRGRTAADRQRTTPS
TPGGKPGDREGFSSALASEENMGEDQTSWRHLQGAGLRHIMLVGESPIGD
GGLSELSSAVRCRFLPRLTTLVIGGPGCRVGPRGVMALALALSSPGCSQL
RNLSMSNCCLGGKSWLARKNRRQQHYRRRNTSRNQARAPTSKTVAATHAA
WDCFFRHLQRLPSLSTLSLQRCGLEDRDVRSLSVSLQILPAGRMRCLRLN
GNCVGLSGLRMVVTALTSRRMRLPALWLRGQRPALAESGAKGVVEEAFRN
GLFAEVEFERPFEVMGGRSQLVLMERTTESEGLGSRVRKHPTSNIYV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR000048IQ_motif_EF-hand-BS