prot_L-elsbetiae_contig12673.2153.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12673.2153.1
Unique Nameprot_L-elsbetiae_contig12673.2153.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length158
Homology
BLAST of mRNA_L-elsbetiae_contig12673.2153.1 vs. uniprot
Match: D7FMN7_ECTSI (Probable fusion protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMN7_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 4.490e-84
Identity = 132/154 (85.71%), Postives = 144/154 (93.51%), Query Frame = 0
Query:    1 MCYICATNAGNTILRAHYAFMAHRNGMPISQLVSATSTDSSEDVAADDAVDAKQVAAMALAEASSGTPSTVSTVLVGLLMRQYSPAGVIELIATVSLAFMYHRWTAIYMPKEYEPEVLKFVQKHGKALGLDPEHPCTEEQAKWEDVAKDARAAS 154
            MCYICATNAGNTILRAHYAFMAHRNGMPI QL +AT+TDSSE VAADD +DAKQVAAMALAEA SGTPSTVS VLVGLLMRQYSPAGVIELIATVSLAFMYHRWTAIYMP+EYEPEVLKFVQ+HG ALG+DPE PCT++Q+ WE +AK+ARAA+
Sbjct:  267 MCYICATNAGNTILRAHYAFMAHRNGMPIRQLATATNTDSSEAVAADDTIDAKQVAAMALAEACSGTPSTVSPVLVGLLMRQYSPAGVIELIATVSLAFMYHRWTAIYMPREYEPEVLKFVQEHGAALGIDPERPCTKDQSTWEGIAKEARAAA 420          
BLAST of mRNA_L-elsbetiae_contig12673.2153.1 vs. uniprot
Match: D7G5G2_ECTSI (Probable fusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G2_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 1.280e-44
Identity = 83/151 (54.97%), Postives = 109/151 (72.19%), Query Frame = 0
Query:    7 TNAGNTILRAHYAFMAHRNGMPISQLVSATS----TDSSEDVAADDAVDAKQVAAMALAEASSGTPSTVSTVLVGLLMRQYSPAGVIELIATVSLAFMYHRWTAIYMPKEYEPEVLKFVQKHGKALGLDPEHPCTEEQAKWEDVAKDARAA 153
            T+A NTILRAH+AFMAHRNG+ +S L +AT+    TD  ED+        K+ AA+++A A SGT   +   LV LLMRQY+PAGVIEL+ T+SL  M  RWT+IYMPK+YEPEVL FV+++G AL LDP  PCTEEQ+ W ++A + R++
Sbjct:  104 TSADNTILRAHFAFMAHRNGVSVSDLANATAEGGDTDGGEDL--------KKAAALSMARACSGTLGPMPRELVALLMRQYTPAGVIELVNTLSLVSMLQRWTSIYMPKQYEPEVLVFVEENGSALSLDPTKPCTEEQSGWRELAAEIRSS 246          
BLAST of mRNA_L-elsbetiae_contig12673.2153.1 vs. uniprot
Match: A0A6H5JWC3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWC3_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 1.850e-36
Identity = 75/153 (49.02%), Postives = 106/153 (69.28%), Query Frame = 0
Query:    1 MCYICATNAGNTILRAHYAFMAHRNGMPISQLVSATSTDSSE--DVAADDAVDAKQVAAMALAEASSGTPSTVSTVLVGLLMRQYSPAGVIELIATVSLAFMYHRWTAIYMPKEYEPEVLKFVQKHGKALGLDPEHPCTEEQAKWEDVAKDAR 151
            M Y CATNA N +LRAH+AFMA R+G+ +S+L+  T   S+   D AA+DA       AMA A+A+S TP+ ++  L GL+ R +SP  VIEL+ TVS+ F  HRWT++Y+P+ YEPE+ +FV+++G ALG+ P  PCT +Q KWE++A   R
Sbjct:  351 MAYQCATNAENNVLRAHFAFMAMRSGVTLSRLIQVTDITSTGGGDSAAEDA-------AMAFAQAASWTPTRMTAALAGLISRLFSPPAVIELLITVSVEFAIHRWTSVYVPRRYEPEIDEFVKEYGPALGI-PHSPCTADQQKWEEIAAQKR 495          
BLAST of mRNA_L-elsbetiae_contig12673.2153.1 vs. uniprot
Match: A0A6H5JXG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXG8_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 8.650e-27
Identity = 64/116 (55.17%), Postives = 81/116 (69.83%), Query Frame = 0
Query:    1 MCYICATNAGNTILRAHYAFMAHRNGMPISQLVSATS----TDSSEDVAADDAVDAKQVAAMALAEASSGTPSTVSTVLVGLLMRQYSPAGVIELIATVSLAFMYHRWTAIYMPKE 112
            M Y+ AT+A NTILRAH+AFMAHRNG+ +S L SAT+    TD  ED+        K+ AA+++A A  GTP  +   LV LLMRQY+PAGVIEL+ T+SL  M  RWT+IYMPK+
Sbjct:  292 MGYMLATSADNTILRAHFAFMAHRNGVSVSNLASATAEGGDTDGGEDL--------KKAAALSMARACGGTPGPLPRELVALLMRQYTPAGVIELVNTLSLVSMLQRWTSIYMPKQ 399          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12673.2153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FMN7_ECTSI4.490e-8485.71Probable fusion protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G5G2_ECTSI1.280e-4454.97Probable fusion protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWC3_9PHAE1.850e-3649.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JXG8_9PHAE8.650e-2755.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029032AhpD-likeGENE3D1.20.1290.10coord: 1..110
e-value: 4.2E-7
score: 32.0
IPR029032AhpD-likeSUPERFAMILY69118AhpD-likecoord: 16..107
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..82
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..157
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12673contigL-elsbetiae_contig12673:138..3970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12673.2153.1mRNA_L-elsbetiae_contig12673.2153.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12673 138..3970 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12673.2153.1 ID=prot_L-elsbetiae_contig12673.2153.1|Name=mRNA_L-elsbetiae_contig12673.2153.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp
MCYICATNAGNTILRAHYAFMAHRNGMPISQLVSATSTDSSEDVAADDAV
DAKQVAAMALAEASSGTPSTVSTVLVGLLMRQYSPAGVIELIATVSLAFM
YHRWTAIYMPKEYEPEVLKFVQKHGKALGLDPEHPCTEEQAKWEDVAKDA
RAASANE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029032AhpD-like