prot_L-elsbetiae_contig1267.2148.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1267.2148.1
Unique Nameprot_L-elsbetiae_contig1267.2148.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length495
Homology
BLAST of mRNA_L-elsbetiae_contig1267.2148.1 vs. uniprot
Match: D7G4F1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F1_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 5.780e-79
Identity = 166/364 (45.60%), Postives = 222/364 (60.99%), Query Frame = 0
Query:  134 WPGSDFKLEQYLAGSVYLWACGEHGEEGGGTASCVSRPEAAAAWVVLVTQTLCYIELFLVSKSQPASESDQTTSSESLASLELNNTGRKYSIVAVAVAMYLMLSMAAADLWGGVALVLESHDSGGG--WYWRRKVFGVFLLSTFIMLVAASTRVLFYSSFEDFEVVIGAAAVLFIADVDEKIMMVLKNVRGEWRLFWVLEVIGLSFGLAVLVVKVTGSDG-VIDNQDEESRCTKALEGIGCEIYEWSFILNSHPMAVTVCALLLTSVISRPSSCLATCLLSD-VCSFRNLDFMALLFLWFGGSLFGSYILGSRVLVYAISTTFVVVYVGV-----NHRAVKLAFAGTRERLRAADRRRRTFWEW 488
            WPGSDFKLE + AGSVYLWACGE  ++ G   + V+ PEA AAWV+L+TQ +CY  L+ V  ++    +D  TSSE++           YS++A+AV+MYL+LS+A ADL GG ALV+E   SG    W+  R++FGVFL++T + L+ AS RVLF+SS ++  +VIGAAAVLFIADVDEK   VLKNV G+WRLFWVLEVIG+SF LA   VK TG+DG V   + + + C    +G  C+I+ W +I    P+ VTVCALL+TS +S P S +      D  C +     +AL   W     F  +      +VYA+     VV V +     + R +  AF    ER  A D+RRR +  W
Sbjct:   38 WPGSDFKLEGFQAGSVYLWACGERDQDDG--EAPVTVPEAVAAWVILLTQAICYARLWYVGGNE---FTDSDTSSETI----------DYSMLAIAVSMYLLLSIAVADLCGGCALVVEGRGSGDEFVWFTGRRLFGVFLVATLLTLIGASVRVLFFSSEDNVNLVIGAAAVLFIADVDEKAHTVLKNVSGKWRLFWVLEVIGMSFVLATFSVKATGNDGRVAGREPDRAACAAWTDGDDCDIFTWPYIFLELPLTVTVCALLITSEVSEPISPIHVRRFHDRPCQWSMFSLLALC--WVSMPYFWRW-----TIVYALVIVLFVVVVALVIACRSFRELYRAFTRGAERFSATDKRRRFYLFW 379          
BLAST of mRNA_L-elsbetiae_contig1267.2148.1 vs. uniprot
Match: A0A6H5KBY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY2_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 1.040e-44
Identity = 94/177 (53.11%), Postives = 122/177 (68.93%), Query Frame = 0
Query:  134 WPGSDFKLEQYLAGSVYLWACGEHGEEGGGTASCVSRPEAAAAWVVLVTQTLCYIELFLVSKSQPASESDQTTSSESLASLELNNTGRKYSIVAVAVAMYLMLSMAAADLWGGVALVLESHDSGG-GWYWRRKVFGVFLLSTFIMLVAASTRVLFYSSFEDFEVVIGAAAVLFIADV 309
            WPG DF+L++ L  SVYLWACGE GE  G     VSR EA AAWVVL++Q +CY  L++++ +QP ++S  +   +   +    +    YSI+A+A AMYL+L++ AADLWGG AL LE   S    W  RR+ FGV +L TF+ L+ AS RVLFYSSFE+ E+VIGAAAVLFIADV
Sbjct:  116 WPGKDFRLKKVLPDSVYLWACGERGE--GDAPYPVSRSEAVAAWVVLISQAVCYAGLWVITGNQPPTQSQTSAIDDDFYA----DRSPDYSILAIAGAMYLLLTIVAADLWGGCALCLEGLGSADFAWCTRRRAFGVCMLGTFVALIGASIRVLFYSSFENMELVIGAAAVLFIADV 286          
BLAST of mRNA_L-elsbetiae_contig1267.2148.1 vs. uniprot
Match: A0A6H5JP75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP75_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 5.460e-40
Identity = 124/307 (40.39%), Postives = 167/307 (54.40%), Query Frame = 0
Query:  185 LCYIELFLVSKSQPASESDQTTSSESLASLELNNTGRKYSIVAVAVAMYLMLSMAAADLWGGVALVLESHDSGGG--WYWRRKVFGVFLLSTFIMLVAASTRVLFYSSFEDFEVVIGAAAVLFIADVDEKIMMVLKNVRGEWRLFWVLEVIGLSFGLAVLVVKVTGSDGVIDNQDE-ESRCTKALEGIGCEIYEWSFILNSHPMAVTVCALLLTSVISRPSSCLATCLLSDVCSFRNLDFMALLFLWFGGSLFGSYILGSRVLVYAISTTFVVVYVGVNHRAVKLAFAGTRERLRAADRRRRTFWEW 488
            +CY  L+ V  +Q  +E D  TSSE++           YSI+A+AV+MYL+LS+A ADL GG ALV+E   SG    W+  R++FGVFL+ TF+ L+ AS RVLF+SS ++  +VIGAAAVLFIADVDEK   VLKN  G+ RL WVLE+IG+SF LA   +K T + G +  +D  +S C  A  G  C I+ W +I    P+ VTV         SRP+  +   LL  +C             W     F  +I+   V +        VV    + R +  AF    ER  A D+RRR +  W
Sbjct:   73 ICYAGLWYVGGNQ-FTEGD--TSSETV----------DYSILAIAVSMYLLLSIAVADLCGGSALVVEGRGSGDDFVWFTGRRLFGVFLVVTFLTLIGASVRVLFFSSQDNVTLVIGAAAVLFIADVDEKAHTVLKNFSGKSRLCWVLEIIGMSFVLATFSLKATDNYGRVAGKDAYKSDC--AGWGNDCGIFTWQYIFFELPLTVTV---------SRPTLAMEHVLLLALC-------------WVSMPYFFRWIILLAVAIVLFVVVVAVVIARRSFRELYRAFTQGAERFTATDKRRRFYLFW 342          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1267.2148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4F1_ECTSI5.780e-7945.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBY2_9PHAE1.040e-4453.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP75_9PHAE5.460e-4040.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 223..245
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 345..384
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 440..444
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 326..344
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 421..439
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 289..293
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..222
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 445..464
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 246..265
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 410..420
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 385..409
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 294..314
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 465..494
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 315..325
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 266..288
NoneNo IPR availableTMHMMTMhelixcoord: 266..288
NoneNo IPR availableTMHMMTMhelixcoord: 424..446
NoneNo IPR availableTMHMMTMhelixcoord: 229..251
NoneNo IPR availableTMHMMTMhelixcoord: 324..346

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1267contigL-elsbetiae_contig1267:23831..26624 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1267.2148.1mRNA_L-elsbetiae_contig1267.2148.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1267 22628..27522 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1267.2148.1 ID=prot_L-elsbetiae_contig1267.2148.1|Name=mRNA_L-elsbetiae_contig1267.2148.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=495bp
MGGIEKSAQQRTSPPGLPSNVNEASKVGVRRAKLPPWSEEVILTETDSAQ
RQLWSSVPQPANARRDVEPGRISADSAPTGHPAASFQRAPATGLDDHPSN
AVRVAAIEEAIPIGSECEEEQLPEAGGEGDGQLWPGSDFKLEQYLAGSVY
LWACGEHGEEGGGTASCVSRPEAAAAWVVLVTQTLCYIELFLVSKSQPAS
ESDQTTSSESLASLELNNTGRKYSIVAVAVAMYLMLSMAAADLWGGVALV
LESHDSGGGWYWRRKVFGVFLLSTFIMLVAASTRVLFYSSFEDFEVVIGA
AAVLFIADVDEKIMMVLKNVRGEWRLFWVLEVIGLSFGLAVLVVKVTGSD
GVIDNQDEESRCTKALEGIGCEIYEWSFILNSHPMAVTVCALLLTSVISR
PSSCLATCLLSDVCSFRNLDFMALLFLWFGGSLFGSYILGSRVLVYAIST
TFVVVYVGVNHRAVKLAFAGTRERLRAADRRRRTFWEWGSFCSF*
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