prot_L-elsbetiae_contig1267.2147.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1267.2147.1
Unique Nameprot_L-elsbetiae_contig1267.2147.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length327
Homology
BLAST of mRNA_L-elsbetiae_contig1267.2147.1 vs. uniprot
Match: D7G818_ECTSI (Ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G818_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 1.200e-11
Identity = 111/358 (31.01%), Postives = 137/358 (38.27%), Query Frame = 0
Query:   18 LPSGWESKVVGDRVMYIDHVNQTTQWDTPGFAPQARTQAQTTITGERPIPXXXXXXXXXXXXXXXXXXXXX----------------------NASGSGRPADPSAAARGGVRGGEAPLPPGWERQTIGDRVVYTDHVNQTTQWERP-----GFAPVPRTRNGTTTTWDRLVPPSPPVPNYRVSGFGGPTNFSAAQGGARXXXXXXXXGWSARTTGSTRSAXXXXXXXXXXXXXXXXXXXXARNPFVAGGXXXGEAPLPRGWSAQTTPSGEAYYVNQYTGSTTWETPANPTAPVAAQTSSVGGGGG----------------------------GVEAPLPPGWSAQTTPSGEAYYVN 320
            L   WE++ V  R++YI+H  +TTQW  P F+ +        +       XXXXXXXXXXXXXXXXXXXXX                      +  GS  PA    A+R  V    +PLP GWE + I  RVVY DH NQ T +ERP     G    PR                 P+   R  G G          GA              + GS RS                     A N   A     G++PLP GW    TP+GE YYVN  + +TTW  P   TA       SV G G                               E PLPPGW  + +  G+ +Y+N
Sbjct:   68 LKPDWEARDVKGRIVYINHTTRTTQWSKPKFSSKKGVATAEPVASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPTRLRGANFNNSVPGSNLPAPAGVASRA-VTTVSSPLPAGWESKIIDGRVVYIDHANQRTSFERPRGQAGGLPQKPR-----------------PLSARRQMGVGVDGELVPHSNGAETNL--------GSSRGSHRSGHLADPIY-------------ASNASSA----VGDSPLPPGWGRSVTPNGELYYVNHVSKTTTWSRP-QWTAGSDGDEESVHGDGARNPESLASIKSGKSTRSRRGEMLGKFAESAEPPLPPGWEERMSAEGKVFYMN 381          
BLAST of mRNA_L-elsbetiae_contig1267.2147.1 vs. uniprot
Match: A0A6H5JUP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUP4_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.630e-11
Identity = 98/361 (27.15%), Postives = 129/361 (35.73%), Query Frame = 0
Query:   14 AGAPLPSGWESKVVGDRVMYIDHVNQTTQWDTPGFAPQARTQAQTTITGERPIPXXXXXXXXXXXXXXXXXXXXXNASGSGRPADPSAAARGGVRGGEA----------------------PLPPGWERQTIGDRVVYTDHVNQTTQWERP-----GFAPVPRTRNGTTTTWDRLVPPSPPVPNYRVSGFGGPTNFSAAQGGARXXXXXXXXGWSARTTGSTRSAXXXXXXXXXXXXXXXXXXXXARNPFVAGGXXXGEAPLPRGWSAQTTPSGEAYYVNQYTGSTTWETPA------------------NPTAPVAAQTSS---------VGGGGGGVEAPLPPGWSAQTTPSGEAYYVN 320
            A   LP  WE++ V  R++YI+H  +TTQW  P F+ + R       T E P+            XXXXXXXXXX    + RPA  +    GG     +                      PLP GWE + I  RVVY DH NQ T +ERP     G    PR                 P+   R  G            GA                GS+R +                    A N   A G    ++PLP GW    T  GE YYVN  + +TTW  P                   NP +  + ++           +G      E PLPPGW  + +  G+ +Y+N
Sbjct:   12 ANKDLPQNWEARDVKGRIVYINHTTRTTQWSKPKFSTKKRA-----ATAE-PVASAHSKSASGRAXXXXXXXXXXXXXSAARPAAATQTRLGGASVSNSVPWSNLPAPAGVASRALTTVSSPLPAGWESKIIDGRVVYIDHTNQRTSFERPRGQAGGLPQQPR-----------------PLSARRQMGIDVGGELVPHSNGAE-------------NLGSSRGSHGSGHVIDPIY---------ASNASSAAG----DSPLPPGWGRSVTRQGEVYYVNHVSKTTTWSRPQWTRGSDGDEESVHGDGARNPESLASIKSGKSTRSRRGEMLGKFAESTEPPLPPGWEERMSAEGKVFYIN 323          
BLAST of mRNA_L-elsbetiae_contig1267.2147.1 vs. uniprot
Match: D8LJ33_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ33_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.530e-5
Identity = 42/128 (32.81%), Postives = 56/128 (43.75%), Query Frame = 0
Query:   17 PLPSGW-ESKVVGDRVMYIDHVNQTTQWDTPGFAPQARTQAQTTITGERPIPXXXXXXXXXXXXXXXXXXXXXNASGSGRPADPSAAARGGVRGGEAPLPPGWERQTIGD-RVVYTDHVNQTTQWERP 142
            PLP GW ESK  G  + Y++H  + T W  P   PQ       ++  E P                       ++SGS        AA GG+ GG  PLP GW  + +    V Y +HV++TT WERP
Sbjct:  265 PLPPGWSESKTAGGEIFYVNHKEKKTTWVRPKGIPQI------SVAEEHP------PQPRWGEEETTSFAPAYSSSGS--------AASGGL-GGVQPLPVGWTSKVMATGEVYYVNHVDKTTSWERP 371          
BLAST of mRNA_L-elsbetiae_contig1267.2147.1 vs. uniprot
Match: UPI000C6EB797 (transcriptional coactivator YAP1-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6EB797)

HSP 1 Score: 55.1 bits (131), Expect = 9.090e-5
Identity = 34/97 (35.05%), Postives = 44/97 (45.36%), Query Frame = 0
Query:  245 EAPLPRGWSAQTTPSGEAYYVNQYTGSTTWETP---------------ANPTAPVAAQTSSVGGGGGGVE------APLPPGWSAQTTPSGEAYYVN 320
            + PLP GW    TPSG+ Y++N  T +TTWE P                +  +P A+  SS      G         PLP GW   TTP GE Y++N
Sbjct:  134 DVPLPSGWEMAKTPSGQRYFLNHITQTTTWEDPRKNLNAATLHPSVSHTSVVSPTASTLSSHSPTSAGPPITLHNLGPLPEGWDQATTPEGEVYFIN 230          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1267.2147.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G818_ECTSI1.200e-1131.01Ubiquitin-protein ligase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JUP4_9PHAE1.630e-1127.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ33_ECTSI1.530e-532.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI000C6EB7979.090e-535.05transcriptional coactivator YAP1-like n=1 Tax=Cent... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 17..48
e-value: 1.7E-4
score: 30.9
coord: 113..144
e-value: 2.3E-6
score: 37.1
coord: 195..225
e-value: 37.0
score: 2.8
coord: 301..327
e-value: 0.86
score: 17.1
coord: 247..279
e-value: 1.1E-7
score: 41.6
IPR001202WW domainPFAMPF00397WWcoord: 248..277
e-value: 2.9E-8
score: 33.6
coord: 302..327
e-value: 1.9E-6
score: 27.8
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 118..142
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 252..277
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 16..48
score: 13.555
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 112..144
score: 13.595
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 300..327
score: 11.546
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 246..279
score: 15.072
NoneNo IPR availableGENE3D2.20.70.10coord: 245..291
e-value: 9.3E-11
score: 43.1
NoneNo IPR availableGENE3D2.20.70.10coord: 298..327
e-value: 7.8E-8
score: 34.0
NoneNo IPR availableGENE3D2.20.70.10coord: 110..142
e-value: 8.1E-10
score: 40.5
coord: 16..46
e-value: 3.5E-9
score: 38.5
NoneNo IPR availablePANTHERPTHR17616YES-ASSOCIATED PROTEINcoord: 197..277
coord: 247..327
coord: 14..74
coord: 107..144
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 245..279
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 300..327
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 12..47
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 111..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1267contigL-elsbetiae_contig1267:10954..17115 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1267.2147.1mRNA_L-elsbetiae_contig1267.2147.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1267 10882..17115 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1267.2147.1 ID=prot_L-elsbetiae_contig1267.2147.1|Name=mRNA_L-elsbetiae_contig1267.2147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=327bp
MSTASSTTTYRSPAGAPLPSGWESKVVGDRVMYIDHVNQTTQWDTPGFAP
QARTQAQTTITGERPIPPPAPAPPAPPPPNPLASASQRNASGSGRPADPS
AAARGGVRGGEAPLPPGWERQTIGDRVVYTDHVNQTTQWERPGFAPVPRT
RNGTTTTWDRLVPPSPPVPNYRVSGFGGPTNFSAAQGGARGGGAPPPPGW
SARTTGSTRSANHSNRSTTRESPANPAAPAAARNPFVAGGGGGGEAPLPR
GWSAQTTPSGEAYYVNQYTGSTTWETPANPTAPVAAQTSSVGGGGGGVEA
PLPPGWSAQTTPSGEAYYVNQYTGSTT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf