prot_L-elsbetiae_contig1246.2002.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1246.2002.1
Unique Nameprot_L-elsbetiae_contig1246.2002.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length410
Homology
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BLAST of mRNA_L-elsbetiae_contig1246.2002.1 vs. uniprot
Match: D8LJ87_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ87_ECTSI)

HSP 1 Score: 473 bits (1216), Expect = 6.930e-162
Identity = 246/332 (74.10%), Postives = 279/332 (84.04%), Query Frame = 0 
Query:   79 VSFGTISAAYLLRAARLVVVYDRDLRRKYQRQVNPSTQRKCMAAALVPCCLIALLIQLRCDGATSNPKRSGICLFFAESWSFFLPVTLLYLVAMASMANKLKYTDDAFKIRDEIAFICAATALTSATRTVHIALLGR--WNDLNETFPPTVHDVISCSAALYISFYRPLKAFYGMGNRRSLRGLYSARRIYSGDFDGGYDNNRHIDKGGG---WGDESKPETWGVLQMLRNGTLRGLLVNFCEQSLCGESVDFLVDVAINYESLSDPEEQFGALSEIVENYLAQGAANEVNVSSSYRNAAALWLTKREAFIALDRETRAHVLDRQRDEIAKV 405
            +SFGTISAAYLLRAARLVVVYDR+LRRK+QR V PS QRK MAAALVPCCLIAL++QLR  GA SN   +G CLFF E WSFF P TLLYL+AMA+MANKLK T+DAFKIRDEI ++C ATA+TSATRTVH +L     W DL+ETFPPTV+D+ +CSA LYISFYRPLKAFYG+G+ RSL G+++ARRIYSGD                   WGDE KPETWGVLQMLRNGTLRGLL+NFCE+SLCGESVDFLVDV INYESLSDP+EQFGALS+IVENYLA+G+ANEVNVS++YRNAAALWLTKRE F+AL+ ETRAHVLD QRDEIAK+
Sbjct:   32 ISFGTISAAYLLRAARLVVVYDRELRRKFQRLVKPSVQRKAMAAALVPCCLIALVVQLRFAGARSN---AGQCLFFDERWSFFFPTTLLYLMAMAAMANKLKNTNDAFKIRDEICYVCVATAITSATRTVHTSLAHTTWWGDLDETFPPTVNDLGACSAVLYISFYRPLKAFYGVGSHRSLHGIHAARRIYSGDXXXXXXXXXXXXXXXXXXXWGDERKPETWGVLQMLRNGTLRGLLINFCEESLCGESVDFLVDVTINYESLSDPDEQFGALSDIVENYLAEGSANEVNVSNAYRNAAALWLTKREEFLALEEETRAHVLDLQRDEIAKM 360
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BLAST of mRNA_L-elsbetiae_contig1246.2002.1 vs. uniprot
Match: A0A6H5K517_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K517_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 4.590e-49
Identity = 87/105 (82.86%), Postives = 100/105 (95.24%), Query Frame = 0 
Query:  301 MLRNGTLRGLLVNFCEQSLCGESVDFLVDVAINYESLSDPEEQFGALSEIVENYLAQGAANEVNVSSSYRNAAALWLTKREAFIALDRETRAHVLDRQRDEIAKV 405
            MLRN TLRGLL+NFCE+SLCGESVDFLVDV INYESLSDP+EQFGALS+IVENYLA+G+ANEVNVS+++RNAAA+WLTKRE F+AL+ ETRAHVLD QRDEIAK+
Sbjct:    1 MLRNETLRGLLINFCEESLCGESVDFLVDVTINYESLSDPDEQFGALSDIVENYLAEGSANEVNVSNAHRNAAAVWLTKREEFLALEGETRAHVLDLQRDEIAKM 105
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BLAST of mRNA_L-elsbetiae_contig1246.2002.1 vs. uniprot
Match: D8LQW8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW8_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 1.090e-5
Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 0 
Query:  297 GVLQMLRNG-TLRGLLVNFCEQSLCGESVDFLVDVAINYESLS------DPE-EQFGALSEIVENYLAQGAANEVNVSSSYRNAAALWLTKREAFIALDRETRAHVLDRQRDEIAKV 405
            GVL++   G  L      FC+++LC ES DFLVDV + YE ++      DPE EQF +   I+  YL   + +E+N+SSS       + T REAF  L  E R  +L    DEI ++
Sbjct:   33 GVLRLASGGGELAQQFGKFCQENLCMESWDFLVDV-VRYERIAPSLIANDPEDEQFNSFLFILNQYLLPTSPDEINISSSMSTRILAFGT-REAFNELSLEERVGILKEPFDEIVRM 147
[Close]
BLAST of mRNA_L-elsbetiae_contig1246.2002.1 vs. uniprot
Match: D8LQX1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX1_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 7.080e-5
Identity = 44/117 (37.61%), Postives = 63/117 (53.85%), Query Frame = 0 
Query:  297 GVLQMLRNG-TLRGLLVNFCEQSLCGESVDFLVDVAINYESLS------DPE-EQFGALSEIVENYLAQGAANEVNVSSSYRNAAALWLTKREAFIALDRETRAHVLDRQRDEIAKV 405
            GVL++   G  L      FC+++LC ES DFLVDV + YE ++      DPE EQF +   I+  YL   + +E+N+SSS       + T R+AF  L  E R  +L    DEI ++
Sbjct:   96 GVLRLASGGGELAQQFGKFCQENLCMESWDFLVDV-VRYERIAPSLVANDPEDEQFNSFLFILNQYLLPTSPDEINISSSMSTRILAFGT-RDAFNELSLEERIGILGEPFDEIVRM 210
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1246.2002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJ87_ECTSI6.930e-16274.10RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K517_9PHAE4.590e-4982.86RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQW8_ECTSI1.090e-538.46RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQX1_ECTSI7.080e-537.61RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016137RGS domainPFAMPF00615RGScoord: 300..386
e-value: 3.6E-7
score: 30.5
NoneNo IPR availableGENE3D1.20.58.1850coord: 292..406
e-value: 1.8E-9
score: 39.3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..136
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 226..245
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 246..409
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..61
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 172..191
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 192..214
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..72
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 215..225
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..98
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..171
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 99..118
NoneNo IPR availableTMHMMTMhelixcoord: 149..171
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 119..136
NoneNo IPR availableTMHMMTMhelixcoord: 79..98
NoneNo IPR availableTMHMMTMhelixcoord: 192..214
IPR036305RGS domain superfamilySUPERFAMILY48097Regulator of G-protein signaling, RGScoord: 301..377

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1246contigL-elsbetiae_contig1246:22796..27631 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1246.2002.1mRNA_L-elsbetiae_contig1246.2002.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1246 22796..27631 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1246.2002.1 ID=prot_L-elsbetiae_contig1246.2002.1|Name=mRNA_L-elsbetiae_contig1246.2002.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=410bp
MSALLEGVIFYVSTFIVLVGVALLWDVWRHKDSFEIAARSPVLLCLAGTA
HVALVFLQMVAGIVDSSFPCAVIIWASYVSFGTISAAYLLRAARLVVVYD
RDLRRKYQRQVNPSTQRKCMAAALVPCCLIALLIQLRCDGATSNPKRSGI
CLFFAESWSFFLPVTLLYLVAMASMANKLKYTDDAFKIRDEIAFICAATA
LTSATRTVHIALLGRWNDLNETFPPTVHDVISCSAALYISFYRPLKAFYG
MGNRRSLRGLYSARRIYSGDFDGGYDNNRHIDKGGGWGDESKPETWGVLQ
MLRNGTLRGLLVNFCEQSLCGESVDFLVDVAINYESLSDPEEQFGALSEI
VENYLAQGAANEVNVSSSYRNAAALWLTKREAFIALDRETRAHVLDRQRD
EIAKVCSYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016137RGS
IPR036305RGS_sf