prot_L-elsbetiae_contig1243.1983.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1243.1983.1
Unique Nameprot_L-elsbetiae_contig1243.1983.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length312
Homology
BLAST of mRNA_L-elsbetiae_contig1243.1983.1 vs. uniprot
Match: D8LKQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ8_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 2.460e-49
Identity = 91/136 (66.91%), Postives = 101/136 (74.26%), Query Frame = 0
Query:    2 APSKTVCLRAFNEELDRTNPWDRQGPTPPPLPKRIAWPGGKIVSNKDEALASFLRRKLDQGETLTSQQMAMLERMVNPNAQVS-----------TATTVGGKRKMRGV----VNGGGGVPGTD-ARNLLHKLERKV 121
            APSKTVCLRAFN++LD TNPW+RQGPTPPPLPKRIAWPGGKIVSNKDEALA+FLRRK+DQG+TLT +QMAML RM  PN  VS           T     GKRK+RGV     N GG   G+  ARNLLHKL RK+
Sbjct:    3 APSKTVCLRAFNKDLDGTNPWERQGPTPPPLPKRIAWPGGKIVSNKDEALANFLRRKVDQGQTLTPEQMAMLRRMAYPNTSVSVPPGGSGVGGTTTAAARGKRKVRGVGHVYENSGGXXXGSVYARNLLHKLGRKI 138          
BLAST of mRNA_L-elsbetiae_contig1243.1983.1 vs. uniprot
Match: A0A6H5L4S5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4S5_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 3.100e-47
Identity = 88/137 (64.23%), Postives = 99/137 (72.26%), Query Frame = 0
Query:    2 APSKTVCLRAFNEELDRTNPWDRQGPTPPPLPKRIAWPGGKIVSNKDEALASFLRRKLDQGETLTSQQMAMLERMVNPNAQVS----------TATTVGGKRKMRGVVN-----GGGGVPGTDARNLLHKLERKVSR 123
            APSKTVCLRAFN++LD TNPW+RQGP PPPLPKRIAWPGGKIVSNKDEALA+FLRRK+DQG+TLT +QM ML+RM  PNA  S          TA    GKRK+RGV +              ARNLLHKLERKV +
Sbjct:    3 APSKTVCLRAFNKDLDGTNPWERQGPAPPPLPKRIAWPGGKIVSNKDEALANFLRRKVDQGQTLTPEQMTMLKRMAYPNASASVPSGGSGVGTTAAAAKGKRKVRGVGHVYENSXXXXXXSVYARNLLHKLERKVRK 139          
BLAST of mRNA_L-elsbetiae_contig1243.1983.1 vs. uniprot
Match: A0A7S4A6M0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6M0_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 4.330e-6
Identity = 31/58 (53.45%), Postives = 36/58 (62.07%), Query Frame = 0
Query:   14 EELDRTNPWDRQGPTPPPLPK--RIAWPGGKIVSNKDEALASFLRRKLDQGETLTSQQ 69
            +  D   PWD   P P  + K  RIAWPGGKI SNKDEAL  +  +KL +GETLT  Q
Sbjct:   32 KRADGREPWD---PAPVEIVKKRRIAWPGGKISSNKDEALLMYFSKKLARGETLTDAQ 86          
BLAST of mRNA_L-elsbetiae_contig1243.1983.1 vs. uniprot
Match: A0A836CN04_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN04_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 9.300e-6
Identity = 28/53 (52.83%), Postives = 35/53 (66.04%), Query Frame = 0
Query:   29 PPPLPKRIAWPGGKIVSNKDEALASFLRRKLDQGETLTSQQMAMLERMVNPNA 81
            PP +  R AWPGGK+VSNK +AL  FL+RK D GE LT  Q+  L  +V  N+
Sbjct:   35 PPMVAGRKAWPGGKLVSNKRQALYKFLKRKQDNGEQLTDAQLHTLAAIVRENS 87          
BLAST of mRNA_L-elsbetiae_contig1243.1983.1 vs. uniprot
Match: A0A1V9Z5E3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z5E3_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 6.610e-5
Identity = 22/27 (81.48%), Postives = 25/27 (92.59%), Query Frame = 0
Query:   32 LPKRIAWPGGKIVSNKDEALASFLRRK 58
            LP+RIAWPGGK+VSNK+EALA FL RK
Sbjct:   19 LPRRIAWPGGKLVSNKEEALAKFLERK 45          
BLAST of mRNA_L-elsbetiae_contig1243.1983.1 vs. uniprot
Match: A0A7S2AZ53_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZ53_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 7.060e-5
Identity = 38/104 (36.54%), Postives = 56/104 (53.85%), Query Frame = 0
Query:   27 PTPPPL-----PKRI-AWPGGKIVSNKDEALASFLRRKLDQGETLTSQQMAMLERMVNPNAQVSTATTVGGKRKMRGVVNGGGGVPGT------DARNLLHKLE 118
            P P P+     PK++ AW GGKI +NK+EA   FLR+K  +GE LTS+Q+ ++E+            ++G  R     +  GG  PGT      D +++L KLE
Sbjct:   17 PLPDPVAAFAAPKKVMAWDGGKITTNKEEATLIFLRKKQARGEVLTSEQLVIIEKF-----------SLGSDRT---ALPEGGATPGTAPVSKKDRKDVLKKLE 106          
BLAST of mRNA_L-elsbetiae_contig1243.1983.1 vs. uniprot
Match: A0A4D9D0E7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0E7_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 8.320e-5
Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = 0
Query:   29 PPPLPKRIAWPGGKIVSNKDEALASFLRRKLDQGE-TLTSQQMAMLERM 76
            P P P+RIAW GGKI SN++EA   FLRRK  QG    T +Q+ +L R+
Sbjct:   28 PEPPPRRIAWAGGKITSNREEATLQFLRRKQQQGNHVFTPEQLVLLRRL 76          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1243.1983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LKQ8_ECTSI2.460e-4966.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4S5_9PHAE3.100e-4764.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4A6M0_9STRA4.330e-653.45Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A836CN04_9STRA9.300e-652.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1V9Z5E3_9STRA6.610e-581.48Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A7S2AZ53_9STRA7.060e-536.54Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A4D9D0E7_9STRA8.320e-553.06Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1243contigL-elsbetiae_contig1243:2361..7586 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1243.1983.1mRNA_L-elsbetiae_contig1243.1983.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1243 2276..8196 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1243.1983.1 ID=prot_L-elsbetiae_contig1243.1983.1|Name=mRNA_L-elsbetiae_contig1243.1983.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=312bp
MAPSKTVCLRAFNEELDRTNPWDRQGPTPPPLPKRIAWPGGKIVSNKDEA
LASFLRRKLDQGETLTSQQMAMLERMVNPNAQVSTATTVGGKRKMRGVVN
GGGGVPGTDARNLLHKLERKVSRAPDTFEAANGGSGGAGGGKFRGLATSR
KGRRRVDLSSLKRGGKEMPLAAGGNSGGGGRRILPDGRGGFTIATSTGGA
GSRAPQQQQQPEAGNKRSRGVGTRGGRFETTGDAAVAAVPAIYREAGFLV
DGKKKNVGKGGGAAGVRVKKGPAQKQQQQQNKREKGLSSVGAASNRSLEE
LMSGGLAAVRR*
back to top