prot_L-elsbetiae_contig1232.1917.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1232.1917.1
Unique Nameprot_L-elsbetiae_contig1232.1917.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length825
Homology
BLAST of mRNA_L-elsbetiae_contig1232.1917.1 vs. uniprot
Match: D7G1A2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1A2_ECTSI)

HSP 1 Score: 776 bits (2004), Expect = 7.470e-269
Identity = 607/879 (69.06%), Postives = 636/879 (72.35%), Query Frame = 0
Query:    1 MPPNLVTLFAHIMSRANEGGSRGSAA-HGWDEVLNPAPXXXXXXXXXXXXXXXX--SGTTSPGPCCPMSAQDWRKAEAFSAHLQSLLAARQTLC--NAHSSGGDRGAAXXXXXXXXXT-------------AAGR--PHSNG-AGGQAPSSSFSGEAQIVSTPHANGGRAKXXXXKQPLAASGSGAAGTPNPAS--AWPRQHGPRVTPKEPS-RGSSGEPSAPIKVVGRVAASRRVNGSAEGAVASLAVSRAGPGAFETPAHTTSHHXXXXXXXSHPGRAGARLPGADNTD------------LRGREHSPSRYPARLRSRRFPQLGGGGECPDIPQPRGLGHHPHGPGAAEDSRDGDQSQGGRRLSPRNSPPTLLAHQHVRGISSN--------DWLVSA------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDSYGMRTRAA-PKASHELDAAAAVPSSGASSSPLPGTCTPQMSNGAVASPEPMGFRPAPPPIISAXXXXXXXXXAAAVRPSPRADLVAPRPRQVLQGG-RSGGRAAPLLRSSVGGRNYTDNHVKQLGLIEAAVVASATARDRATYNLPRQGRTLTLTNIFKFIALHGAGAMYRLAMDKQVEAHTGRHSNFFDGKIDARIVGVIKKDIGDEVITKSRKFSKILLSLIAEGCSHPDCDWDHTSFTSENIANLQARIEARTGTSTLKFCSDPAVSLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPLL-PLXXXXXXXXXXXXXXXXXXXXXGGAHSKRRLDLGRDDDAGQAPSPRLKKLKRAAKSRVAPTAGGXXX--GVESTPNGDGIGNSKSPPKEEDDMRAAEVLQGLKDVVGGQ 824
            MPPNL+TLFAH+MSRANEGGSRGSAA HGWDEVLN A XXXXXXXXXXXXXXXX  SGT SPGPCCPMSAQDWRKAEAFS HLQSLLAAR  LC  N  SS   RGA     XXXXX              A GR  P S+G A G+ PS    G     STPHANG RAK    K P A SG  AA TPN A+  AWP QH P  TPKE S RG   EPSAPIK VGRVA SRRVNG AEGAVASLAVSRAGPGAFETPAH+TSHHXXXXXXX                D            LRGREHSPSRYPARLRSRRFPQLGG                    GA  D  +G QSQGGRRLSPR+SPP  +  +H RGI S+         W+V+A      A XXXXXXXXXXXX                    X    + YGMRTRAA PK S+EL  AA V SSG SSSPLPG CTPQ++ GAV SP PM FRPAPPPI+S XXXXXXXXX AA RPSPRA++ APRPRQVLQGG RSGGRAAPL RSSVGGRNYTDNHVKQLGLIEAAVVASATARDRATYNLPRQGRTLTLTN+FKFIAL GAGAMYRLAMDKQVEAHTGRHSNFFDGKIDARIVGVIKKDIGDE ITKSRKFSKILLSL+AEGC+HPDCDWDHTSFTSE IANLQAR+EA TGTS LKFC+DPAV LAAXXXXXXXXXXXXXXXXXXXXXXXXXX                SSPL       XXXXXXXXXXXXXXXXXX    SKRRLDLGRDDD GQ PSPRLKKLKRAA++RV  TAG      GVESTP  +G  NSKSPPKEEDDMRAAEVLQGLKD+VG Q
Sbjct:   14 MPPNLMTLFAHVMSRANEGGSRGSAAAHGWDEVLNAAXXXXXXXXXXXXXXXXXXXSGTISPGPCCPMSAQDWRKAEAFSVHLQSLLAARDALCGSNGSSSSSSRGAGATTGXXXXXXXXXXXXYYGPQSGAEGRCSPASSGPADGREPSPFPGGRKD--STPHANG-RAKGGRAKAPAAPSG--AAATPNNAAGTAWP-QHVPGATPKESSSRGGGEEPSAPIKAVGRVAVSRRVNGGAEGAVASLAVSRAGPGAFETPAHSTSHHXXXXXXXXXXXXXXXXXXXPGTVDSXXXXXXXXXNSLRGREHSPSRYPARLRSRRFPQLGGXXXXXXXXXXXXXXXRAGDAGA--DGLEGHQSQGGRRLSPRHSPPASVGREHGRGIPSDARRQHNAHGWVVTAGAEKRAAGXXXXXXXXXXXXRGEEEGGVFTHDGGRGHEGGXGRAGEGYGMRTRAAAPKGSYELGPAA-VASSGPSSSPLPGACTPQITTGAVVSPVPMDFRPAPPPIMSXXXXXXXXXXVAAGRPSPRAEVAAPRPRQVLQGGGRSGGRAAPLPRSSVGGRNYTDNHVKQLGLIEAAVVASATARDRATYNLPRQGRTLTLTNVFKFIALRGAGAMYRLAMDKQVEAHTGRHSNFFDGKIDARIVGVIKKDIGDEAITKSRKFSKILLSLVAEGCTHPDCDWDHTSFTSEKIANLQARMEASTGTSALKFCADPAVFLAAXXXXXXXXXXXXXXXXXXXXXXXXXXSGSIP-----------SSPLSGSAFAGXXXXXXXXXXXXXXXXXXXXXXSKRRLDLGRDDDGGQTPSPRLKKLKRAARARVT-TAGSAAADGGVESTPTAEG--NSKSPPKEEDDMRAAEVLQGLKDIVGSQ 869          
BLAST of mRNA_L-elsbetiae_contig1232.1917.1 vs. uniprot
Match: A0A835YUT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT3_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.320e-45
Identity = 87/142 (61.27%), Postives = 107/142 (75.35%), Query Frame = 0
Query:  504 RSSVGGRNYTDNHVKQLGLIEAAVVASATARDRATYNLPRQGRTLTLTNIFKFIALHGAGAMYRLAMDKQVEAHTGRHSNFFDGKIDARIVGVIKKDIGDEVITKSRKFSKILLSLIAEGCSHPDCDWDHTSFTSENIANLQ 645
            R+SVGGRNYTD  ++QL LIEA VVA AT  D A +NLPRQ RTL LTN+FK+IAL GA  ++ +A+ + +E  TGRHSNF+DGKID RIV V+K D+ D   T SRKFSK+LLSL+AEGC  P CDW + +F S+NI  LQ
Sbjct:  369 RTSVGGRNYTDEQLRQLQLIEAEVVARATPGDHAAFNLPRQARTLALTNMFKYIALRGAARLHAMAVARGLEGRTGRHSNFYDGKIDTRIVAVVKHDMDDAAATASRKFSKVLLSLLAEGCGDPSCDWSYATFASDNINRLQ 510          
BLAST of mRNA_L-elsbetiae_contig1232.1917.1 vs. uniprot
Match: A0A835YSU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSU2_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.720e-22
Identity = 53/92 (57.61%), Postives = 72/92 (78.26%), Query Frame = 0
Query:  523 IEAAVVASATARDRATYNLPRQGRTLTLTNIFKFIALHGAGAMYRLAMDKQVEAHTGRHSNFFDGKIDARIVGVIKKDIGDEVITKSRKFSK 614
            IEA V A AT  DRA ++LPRQ RTL LTN+FK+IAL GA  M+ LA+ + +    G+HSNF+DGKIDAR+V ++++D+GD+V T++RKFSK
Sbjct:  313 IEARVAARATDADRAAFSLPRQARTLALTNMFKYIALRGAAQMHALAVLRGLHTCGGKHSNFYDGKIDARVVAIVRRDVGDDVATQTRKFSK 404          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1232.1917.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1A2_ECTSI7.470e-26969.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUT3_9STRA1.320e-4561.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YSU2_9STRA1.720e-2257.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1232contigL-elsbetiae_contig1232:18667..21784 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1232.1917.1mRNA_L-elsbetiae_contig1232.1917.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1232 18667..21808 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1232.1917.1 ID=prot_L-elsbetiae_contig1232.1917.1|Name=mRNA_L-elsbetiae_contig1232.1917.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=825bp
MPPNLVTLFAHIMSRANEGGSRGSAAHGWDEVLNPAPAPSSASASPSASS
SSPSGTTSPGPCCPMSAQDWRKAEAFSAHLQSLLAARQTLCNAHSSGGDR
GAAAAAAAAPAATAAGRPHSNGAGGQAPSSSFSGEAQIVSTPHANGGRAK
GGRAKQPLAASGSGAAGTPNPASAWPRQHGPRVTPKEPSRGSSGEPSAPI
KVVGRVAASRRVNGSAEGAVASLAVSRAGPGAFETPAHTTSHHNHHHHHH
SHPGRAGARLPGADNTDLRGREHSPSRYPARLRSRRFPQLGGGGECPDIP
QPRGLGHHPHGPGAAEDSRDGDQSQGGRRLSPRNSPPTLLAHQHVRGISS
NDWLVSAAGGGGGGGGGGGGGGGGGGGGGGGGGGGEGAIGGGGGSSDSYG
MRTRAAPKASHELDAAAAVPSSGASSSPLPGTCTPQMSNGAVASPEPMGF
RPAPPPIISASAAAAAVSVAAAVRPSPRADLVAPRPRQVLQGGRSGGRAA
PLLRSSVGGRNYTDNHVKQLGLIEAAVVASATARDRATYNLPRQGRTLTL
TNIFKFIALHGAGAMYRLAMDKQVEAHTGRHSNFFDGKIDARIVGVIKKD
IGDEVITKSRKFSKILLSLIAEGCSHPDCDWDHTSFTSENIANLQARIEA
RTGTSTLKFCSDPAVSLAAAAAAAAAAAAATSTAAAGPAGSSARSGGGGG
SGGGSNGGGGGSSPLLPLGSSAFSGGPAGSSGSASTGGTGGAHSKRRLDL
GRDDDAGQAPSPRLKKLKRAAKSRVAPTAGGGGGGVESTPNGDGIGNSKS
PPKEEDDMRAAEVLQGLKDVVGGQ*
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