prot_L-elsbetiae_contig1228.1883.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1228.1883.1
Unique Nameprot_L-elsbetiae_contig1228.1883.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length406
Homology
BLAST of mRNA_L-elsbetiae_contig1228.1883.1 vs. uniprot
Match: D8LJV2_ECTSI (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJV2_ECTSI)

HSP 1 Score: 547 bits (1409), Expect = 2.740e-192
Identity = 296/402 (73.63%), Postives = 320/402 (79.60%), Query Frame = 0
Query:   16 AVARLAQPLVKTSNLRGFASCPLR-------SDGGASRTPEQTLLPRVSCRHATSTS--QQGQTAGVDP-SQVSDDRSAKDSVSSHELQEKWGWTTADPLYWPYKIMGVFSTKNTNALSSARMLQACLNNAESTEWYAEGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQEFLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFMTLVQYDHAYTLESRTERMDVLTSALWRGVFMSDESIKEPHVRVLAEYIDSELADIYAVDASDFFAACIELAPPPTAELKAAGKKMAKGGAGKLSSKKG---GARGVGGTAAENASAAIGERRIGDKVQHEDFAGENGRKGRWRSCLAESGKVYYWHTVTREVTWDRPADSEAYVRSVMPKTDQTRTATA 404
            A  RL +PLVK SN RG ASCPLR           AS    Q LLPR  CR  TST+  QQ Q A VD   QVSD+R AKD+V+SHEL EKWGW T+DPLYWPYKIMGVFSTKNTNALSSARMLQ CLNNAE TEWY++GKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQE LFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTF+TLVQ+DHAYTLESR ERMDVLTSALWRGV+MSDESIKEPHVRVLAEY+D+ELADIYAVDAS+FFA CIE APPPTAELKAA                G    A G+ G AA++ +A  G   IG+KV H DF   +GR+GRWR+CLAESGKVYYWHTV+REVTWDRPA +EAYV SVMPK DQT TA A
Sbjct:   10 AAVRLVRPLVKASNARGLASCPLRVHNSGTSPKASASCAAVQKLLPRAPCRQVTSTTTTQQRQVAEVDDRGQVSDERPAKDAVNSHELHEKWGWKTSDPLYWPYKIMGVFSTKNTNALSSARMLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFITLVQFDHAYTLESREERMDVLTSALWRGVYMSDESIKEPHVRVLAEYVDAELADIYAVDASEFFAVCIEFAPPPTAELKAAXXXXXXXXXXXXXXXXGTVAAAPGLEGGAADSTAAGRGGG-IGEKVHHGDFGSGDGREGRWRACLAESGKVYYWHTVSREVTWDRPAGAEAYVPSVMPKADQTLTAAA 410          
BLAST of mRNA_L-elsbetiae_contig1228.1883.1 vs. uniprot
Match: A0A484DVK9_BRELC (WW domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVK9_BRELC)

HSP 1 Score: 97.1 bits (240), Expect = 1.510e-19
Identity = 74/265 (27.92%), Postives = 113/265 (42.64%), Query Frame = 0
Query:  125 SARMLQACLNNAESTEWYAEGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQEFLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFMTLVQYDHAYTLESRTERMDVLTSALWRGVFMSDESIKEPHVR-VLAEYIDSELADIYAVDASDFFAACIELAPPPTAELKAAGKKMAKGGAGKLSSKKGGARGVGGTAAENASAAIGERRIGDKVQHEDFAGENGRKGRWRSCLAESGKVYYWHTVTREVTWDRPADSEAY 388
            S+ + Q+C+N+    ++Y    +   F  +   L  +VWL+ RRL  EGE+GK +QE +FD LW ET  ++R + +SE+ + KYLA+ QQ  F   + YD       R  +  V    L       +ES +   +  ++AE++  EL ++  VDA       I   P P    K                                   I    + D V      G+  R G WRS L   GK+Y+W+  TR   WDRP   + +
Sbjct:   15 SSAVFQSCMNHTAQPDYYRALGLPQSFRAQQAILMAHVWLVHRRLALEGEKGKIMQELVFDRLWEETVVRIRYLNISELTVNKYLAQVQQICFNACIAYDKGLKEGPRYFQTAVAQHLL------ENESTEGLRIASIMAEHMKRELKNLEKVDAKYIMLGTIPWTPLPETHAK-----------------------------------IRPTDVDDVV----LIGQ--RFGNWRSALDNRGKLYFWNITTRYSIWDRPTGDKLH 232          
BLAST of mRNA_L-elsbetiae_contig1228.1883.1 vs. uniprot
Match: F0WM81_9STRA (Uncharacterized protein AlNc14C153G7585 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WM81_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 5.980e-17
Identity = 73/279 (26.16%), Postives = 119/279 (42.65%), Query Frame = 0
Query:  107 WPYKIMGVFSTKNTNALSSARMLQACLNNAESTEWYAEGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQEFLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFMTLVQYDHAYTLESRTERMDVLTSALWRGVFMSDESIK--EPHVRVLAEYIDSELADIYAVDASDFFAACIELAPPP-TAELKAAGKKMAKGGAGKLSSKKGGARGVGGTAAENASAAIGERRIGDKVQHEDFAGENGRKGRWRSCLAESGKVYYWHTVTREVTWDRP 382
            W + ++G  +  +     S ++LQ+C+N +   E Y   ++  +F  +   L  +VWL+ RRL +EG+ G+ +QE +FD LW ET  ++R  +VSE+ + KYL + QQ  F   V YD      S+T+      +A+   +   D+S    E HVR   EYI   +  +  +D        I  A  P  ++LK     +                                  IG K             G+WR+ L   G++YYW++ +R   W  P
Sbjct:   49 WLFNLLGYNNQDDKMYRESTKVLQSCVNQSAVPELYQAIRLRPDFRGQQALLMVHVWLIHRRLAKEGDAGRVLQELVFDRLWEETVLRIRHQQVSELTVNKYLKQVQQVCFNACVAYDKGLE-RSKTD----FNTAIRCHLLAQDDSHSPDEDHVRATYEYIQQNMQMLEKLDEKYLMKGVIPWAQAPKVSDLKQIDIVL----------------------------------IGQKF------------GKWRTALDIRGQMYYWNSESRLSAWKLP 276          
BLAST of mRNA_L-elsbetiae_contig1228.1883.1 vs. uniprot
Match: A0A024GN83_9STRA (WW domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GN83_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 5.410e-13
Identity = 68/280 (24.29%), Postives = 117/280 (41.79%), Query Frame = 0
Query:  107 WPYKIMGVFSTKNTNALSSARMLQACLNNAESTEWYAEGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQEFLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFMTLVQYDHAYTLESRTERMDVLTSALWRGVFMSDESIKEP---HVRVLAEYIDSELADIYAVDASDFFAACIELAPPPTAELKAAGKKMAKGGAGKLSSKKGGARGVGGTAAENASAAIGERRIGDKVQHEDFAGENGRKGRWRSCLAESGKVYYWHTVTREVTWDRPA 383
            W + ++G  +  +     S ++LQ+C+N +     Y   ++  +F  +   L  +VWL+ RRL ++GE G+ +QE +FD LW ET  ++R  +VSE+ + KYL + QQ  F   + YD      +  ER     +   R   ++++ +  P   +V++ + Y+   +  +  +D        I     P      AG K                              +    IG K             G WR+ L   GK+YYWH+ +R   W+ PA
Sbjct:   70 WLFNLLGYNNNDDKLYRESVKLLQSCVNQSAVPNLYHAIRLRPDFRGQQALLMAHVWLVHRRLGKQGEAGRVLQEGVFDRLWEETVSRIRHQKVSELTVNKYLKQVQQVCFNACIAYD------TGLERSKDDFNTAIRCHLLAEDDLHVPDEQYVQMTSTYLWQNMKMLDKLDERYLMKGVIPWDHVPDI----AGFKQ-----------------------------LDVVLIGQKF------------GNWRTALDNCGKMYYWHSESRLSAWELPA 298          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1228.1883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJV2_ECTSI2.740e-19273.63WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A484DVK9_BRELC1.510e-1927.92WW domain-containing protein n=1 Tax=Bremia lactuc... [more]
F0WM81_9STRA5.980e-1726.16Uncharacterized protein AlNc14C153G7585 n=1 Tax=Al... [more]
A0A024GN83_9STRA5.410e-1324.29WW domain-containing protein n=1 Tax=Albugo candid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 352..384
e-value: 3.2E-6
score: 36.7
IPR001202WW domainPFAMPF00397WWcoord: 357..382
e-value: 4.0E-7
score: 30.0
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 357..384
score: 10.561
NoneNo IPR availableGENE3D2.20.70.10coord: 349..393
e-value: 2.8E-10
score: 41.2
NoneNo IPR availablePANTHERPTHR12184:SF1UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX ASSEMBLY FACTOR 1coord: 59..295
IPR021150Ubiquinol-cytochrome c chaperone/UPF0174PFAMPF03981Ubiq_cyt_C_chapcoord: 154..283
e-value: 9.7E-15
score: 54.9
IPR007129Ubiquinol-cytochrome c chaperone, CBP3PANTHERPTHR12184BASIC FGF-REPRESSED ZIC BINDING PROTEIN HOMOLOG ZIC3-BINDING PROTEINcoord: 59..295
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 353..383

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1228contigL-elsbetiae_contig1228:13496..19437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1228.1883.1mRNA_L-elsbetiae_contig1228.1883.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1228 13450..20051 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1228.1883.1 ID=prot_L-elsbetiae_contig1228.1883.1|Name=mRNA_L-elsbetiae_contig1228.1883.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=406bp
MSTAGLSMKIRGAAGAVARLAQPLVKTSNLRGFASCPLRSDGGASRTPEQ
TLLPRVSCRHATSTSQQGQTAGVDPSQVSDDRSAKDSVSSHELQEKWGWT
TADPLYWPYKIMGVFSTKNTNALSSARMLQACLNNAESTEWYAEGKISNE
FLPKLLWLSTNVWLMSRRLLREGERGKKVQEFLFDELWRETKRQMRSIEV
SEMMLKKYLAEAQQHTFMTLVQYDHAYTLESRTERMDVLTSALWRGVFMS
DESIKEPHVRVLAEYIDSELADIYAVDASDFFAACIELAPPPTAELKAAG
KKMAKGGAGKLSSKKGGARGVGGTAAENASAAIGERRIGDKVQHEDFAGE
NGRKGRWRSCLAESGKVYYWHTVTREVTWDRPADSEAYVRSVMPKTDQTR
TATAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR021150Ubiq_cyt_c_chap/UPF0174
IPR007129Ubiqinol_cyt_c_chaperone_CPB3
IPR036020WW_dom_sf