prot_L-elsbetiae_contig1228.1882.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1228.1882.1
Unique Nameprot_L-elsbetiae_contig1228.1882.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length294
Homology
BLAST of mRNA_L-elsbetiae_contig1228.1882.1 vs. uniprot
Match: D8LJV4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJV4_ECTSI)

HSP 1 Score: 385 bits (988), Expect = 1.410e-132
Identity = 205/256 (80.08%), Postives = 218/256 (85.16%), Query Frame = 0
Query:   43 MLSSVLKGYKPTFTYGSIFTGFAVDRVPMQKADEVRLDNRVLKVVENRVVSALSKELLIETLQTKYTVVNRDTGELYDVREIDNSMPTRYSVLPHNVRVPSKARQLLGINSQPTHVPPKAAKVFGHNPYRQHVTKRDGPISDKAAQLLGVITQSSG----GGGSYRRPNVGRGPRGMVEEEDAEDWGERRHGGIVDDEDGMGMLHAHEGGVYMGNSQRPAEMTSDGAYLDEDDEGDGLPVALWKQ-RRGHGAPLNQ 293
            MLSSVLKGYKPTFTY SIFTGFAVDRVPMQKADE+RLDNRVLKVVENRVVSALSKELLIETLQTKYTVVNRDTGELYDVREID SMP RYSVLPHN+RVPSKARQLLGIN QPTHVPPKAAKVFGHN         DG I+DKAAQ+LGVI QS+G    GGG YRRP+VGRGPRG VEEED  DWGE      + D+DGMGMLHAH  GVYMG+SQRPAEMTSDG Y D+++EGD LPVALW+Q RRGHG  LNQ
Sbjct:    1 MLSSVLKGYKPTFTYSSIFTGFAVDRVPMQKADEIRLDNRVLKVVENRVVSALSKELLIETLQTKYTVVNRDTGELYDVREIDTSMPYRYSVLPHNMRVPSKARQLLGINEQPTHVPPKAAKVFGHNXXXXXXXXXDGNITDKAAQVLGVIPQSAGAGGRGGGGYRRPHVGRGPRGTVEEEDDADWGEPLDS--MGDDDGMGMLHAHGRGVYMGSSQRPAEMTSDGPY-DDEEEGDDLPVALWRQQRRGHGT-LNQ 252          
BLAST of mRNA_L-elsbetiae_contig1228.1882.1 vs. uniprot
Match: A0A835ZJ29_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ29_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 3.470e-17
Identity = 50/93 (53.76%), Postives = 63/93 (67.74%), Query Frame = 0
Query:   12 RPHRPLPTAVGEKRIPESYIVILQPTVTPYEMLSSVLKGYKPTFTYGSIFTGFAVDRVPMQKADEVRLDNRVLKVVENRVVSALSKELLIETL 104
            RP        G     ++YIVILQPTV P E+L++VLKG+KP F YG+IF GF+VDR+      EVRLD RVL VVE+R    LS+E+L+ETL
Sbjct:    9 RPRTQANNGNGSAATADNYIVILQPTVKPDEILNTVLKGHKPGFVYGTIFVGFSVDRLVPLLVLEVRLDPRVLTVVEDRASMGLSREVLMETL 101          
BLAST of mRNA_L-elsbetiae_contig1228.1882.1 vs. uniprot
Match: A0A835ZFK3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFK3_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.090e-12
Identity = 37/74 (50.00%), Postives = 50/74 (67.57%), Query Frame = 0
Query:  115 TGELYDVREIDNSMPTRYSVLPHNVRVPSKARQLLGINSQPTHVPPKAAKVFGHNPYRQHVTKRDGPISDKAAQ 188
            TGELYDVRE+D + P RYS+LP N+RVP KAR +LGIN + T V  KAA+V GH   R     +  P+ ++ ++
Sbjct:    1 TGELYDVRELDGTAPYRYSILPSNLRVPRKARDILGINHKKTRVHSKAARVMGHRRARSRSVAQLPPVEEELSK 74          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1228.1882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJV4_ECTSI1.410e-13280.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZJ29_9STRA3.470e-1753.76Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835ZFK3_9STRA1.090e-1250.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1228contigL-elsbetiae_contig1228:4315..9723 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1228.1882.1mRNA_L-elsbetiae_contig1228.1882.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1228 4110..10627 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1228.1882.1 ID=prot_L-elsbetiae_contig1228.1882.1|Name=mRNA_L-elsbetiae_contig1228.1882.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=294bp
MVDGPRSGRSSRPHRPLPTAVGEKRIPESYIVILQPTVTPYEMLSSVLKG
YKPTFTYGSIFTGFAVDRVPMQKADEVRLDNRVLKVVENRVVSALSKELL
IETLQTKYTVVNRDTGELYDVREIDNSMPTRYSVLPHNVRVPSKARQLLG
INSQPTHVPPKAAKVFGHNPYRQHVTKRDGPISDKAAQLLGVITQSSGGG
GSYRRPNVGRGPRGMVEEEDAEDWGERRHGGIVDDEDGMGMLHAHEGGVY
MGNSQRPAEMTSDGAYLDEDDEGDGLPVALWKQRRGHGAPLNQ*
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