prot_L-elsbetiae_contig12201.1839.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12201.1839.1
Unique Nameprot_L-elsbetiae_contig12201.1839.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length293
Homology
BLAST of mRNA_L-elsbetiae_contig12201.1839.1 vs. uniprot
Match: D8LCC3_ECTSI (RHD3c, RHD3/Sey1 family GTPase involved in the ER-to-Golgi traffic n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC3_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 1.130e-112
Identity = 191/256 (74.61%), Postives = 203/256 (79.30%), Query Frame = 0
Query:   41 PATAPTPLVLVDVEGTQSRDRGGVDGMEFDSRTTLFAVVAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLYEGGGQDGDGGDGVPQERGEG---GGAVAGGPARFPKVLMLVLRDVEEEEHFEALDKAARANMEALWRDVDKPSSLRDAALSEMFDLRTAGLPHFVYQRREFAAKAAALSRSFLEPGHESFVFPTPLPGQLAEGGDEGRVRQRADDPGGRAGRQQAVVPLSMLRPRLEGIWASASSNRRLAE 293
            P+ APTP VLVDVEGTQSRDRGG DGMEFDSRTTLFAV+AADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLYEG    GD G   P     G   G    G  ARFPKVLMLVLRDVEE+EH EALDKAARAN+EALWRDVDKPSSLRDA LSE+FD+RT GLPHF+YQRREFAAKAA LSRSFL+P +  F+F  P   Q    G EG VRQRA++PGGR     A VPLS LR RLEGIW SASSN RLAE
Sbjct:   75 PSAAPTPFVLVDVEGTQSRDRGGTDGMEFDSRTTLFAVMAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLYEGQDGTGDVGSDGPGPGTAGLLAGREGTGAQARFPKVLMLVLRDVEEDEHLEALDKAARANLEALWRDVDKPSSLRDAGLSEVFDVRTCGLPHFIYQRREFAAKAATLSRSFLDPTYRGFIFRKPRR-QAGVVGWEGAVRQRAENPGGRH-TLHAPVPLSQLRQRLEGIWTSASSNNRLAE 328          
BLAST of mRNA_L-elsbetiae_contig12201.1839.1 vs. uniprot
Match: A0A6H5KVA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVA5_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 1.560e-89
Identity = 162/224 (72.32%), Postives = 173/224 (77.23%), Query Frame = 0
Query:   73 TTLFAVVAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLYEGGGQDGDGGDGVPQERGEG---GGAVAGGPARFPKVLMLVLRDVEEEEHFEALDKAARANMEALWRDVDKPSSLRDAALSEMFDLRTAGLPHFVYQRREFAAKAAALSRSFLEPGHESFVFPTPLPGQLAEGGDEGRVRQRADDPGGRAGRQQAVVPLSMLRPRLEGIWASASSNRRLAE 293
            TTLFAV+AADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLYEG    GD G  VP     G   G    G  ARFPKVLMLVLRDVEE EH EALDKAARAN+E+LWRDVDKPSSLRDA LSE+FD+RT GLPHF+YQRREFAAKAA LSRSFL+P +  F+F  P   Q    G EG  RQRA++PGGR     A VPLS LR RLEGIW SASSN RLAE
Sbjct:  158 TTLFAVMAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLYEGQDGTGDVGSDVPGPGTAGLRAGREGTGSQARFPKVLMLVLRDVEENEHLEALDKAARANLESLWRDVDKPSSLRDAGLSEVFDVRTCGLPHFLYQRREFAAKAATLSRSFLDPTYRGFIFRKPRR-QAGVVGREGAGRQRAENPGGRHA-LHAPVPLSELRQRLEGIWTSASSNNRLAE 379          
BLAST of mRNA_L-elsbetiae_contig12201.1839.1 vs. uniprot
Match: A0A7S3B1K6_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B1K6_9EUKA)

HSP 1 Score: 107 bits (267), Expect = 1.630e-22
Identity = 59/188 (31.38%), Postives = 103/188 (54.79%), Query Frame = 0
Query:   47 PLVLVDVEGTQSRDRGGVDGMEFDSRTTLFAVVAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLYEGGGQDGDGGDGVPQERGEGGGAVAGGPARFPK--VLMLVLRD-VEEEEHFEALDKAARANMEALWRDVDKPSSLRDAALSEMFDLRTAGLPHFVYQRREFAAKAAALSRSFLEPGHES 231
            PL+++D++GT S + GG    +F+ +++LFA+  +DV+++N+W HD+GR D    S+LR+V E  ++L+                          G    P+  VL+ ++RD +E+   F+ + +  + ++ ++W  +DKPS L DA L  +FDL+   LPHFV+Q+ EF      + RS  +  H S
Sbjct:  101 PLLVLDLQGTDSIE-GGEGSKKFERQSSLFALALSDVLLVNVWFHDLGRHDASNMSLLRTVMEVHLQLF--------------------------GRVERPERTVLLFLIRDHIEQSTPFDLMQQMVQRDVASIWESIDKPSHLTDAPLDRLFDLQITALPHFVFQKSEFTEAVGGV-RSRFDAAHAS 260          
BLAST of mRNA_L-elsbetiae_contig12201.1839.1 vs. uniprot
Match: A0A1X0SBX9_RHIZD (Protein SEY1 n=5 Tax=Rhizopus TaxID=4842 RepID=A0A1X0SBX9_RHIZD)

HSP 1 Score: 105 bits (263), Expect = 7.480e-22
Identity = 57/187 (30.48%), Postives = 96/187 (51.34%), Query Frame = 0
Query:   48 LVLVDVEGTQSRDRGGVDGMEFDSRTTLFAVVAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLYEGGGQDGDGGDGVPQERGEGGGAVAGGPARFPKVLMLVLRDVEEEEHFEALDKAARANMEALWRDVDKPSSLRDAALSEMFDLRTAGLPHFVYQRREFAAKAAALSRSFLEPGHESFVF 234
            ++++DVEGT  R+RG  +  +F+ ++ LF++  ++VI+LNLW H VG   G    +L++VFE  ++L++              +RG           +   +L +V+RD       E L K  R ++E +W  + KP  L D  +++ FD    GLPH +    +F  + A L + F +P H  FVF
Sbjct:  114 VLVMDVEGTDGRERG--EDQDFERKSALFSMATSEVIILNLWEHQVGLYQGANMGLLKTVFEVNLQLFQ-------------NQRG-----------KEKTLLFMVIRDFVGATPLENLAKTLRTDLEKIWESLSKPEGLEDCKITDYFDFMFTGLPHKILLPDKFDEEVAKLRKRFNDPNHPDFVF 274          
BLAST of mRNA_L-elsbetiae_contig12201.1839.1 vs. uniprot
Match: G0UYJ2_TRYCI (GB1/RHD3-type G domain-containing protein n=1 Tax=Trypanosoma congolense (strain IL3000) TaxID=1068625 RepID=G0UYJ2_TRYCI)

HSP 1 Score: 105 bits (262), Expect = 9.380e-22
Identity = 62/187 (33.16%), Postives = 96/187 (51.34%), Query Frame = 0
Query:   48 LVLVDVEGTQSRDRGGVDGMEFDSRTTLFAVVAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLYEGGGQDGDGGDGVPQERGEGGGAVAGGPARFPKVLMLVLRDVEEEEHFEALDKAARANMEALWRDVDKPSSLRDAALSEMFDLRTAGLPHFVYQRREFAAKAAALSRSFLEPGHESFVF 234
            L ++D EGT   +RG  D   F+ + +LFA+  ADV+++N+WA DVGR +    S+LR+VFE  ++L+                      +     +R    L++VLRD  E +      K  R +++ +W D+ KP  L  A + ++F+LR   LPH+  QR EFAA  +   R F  P  E F+F
Sbjct:  110 LFVLDFEGTDGIERG--DNQNFERQLSLFALSVADVLLVNMWAVDVGRFNAANMSLLRTVFEVNLQLF----------------------SQNNHVSREKPTLLVVLRDFVEPDTAPYF-KTVRGSLDKIWGDIQKPERLSGATIDDVFELRYHALPHYRLQRAEFAAAVSDFRRWFTSPRSEKFLF 271          
BLAST of mRNA_L-elsbetiae_contig12201.1839.1 vs. uniprot
Match: A4RVH4_OSTLU (Protein ROOT HAIR DEFECTIVE 3 homolog n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4RVH4_OSTLU)

HSP 1 Score: 105 bits (262), Expect = 1.040e-21
Identity = 55/184 (29.89%), Postives = 102/184 (55.43%), Query Frame = 0
Query:   46 TPLVLVDVEGTQSRDRGGVDGMEFDSRTTLFAVVAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLYEGGGQDGDGGDGVPQERGEGGGAVAGGPARFPKVLMLVLRDVEEEEHFEALDKAARANMEALWRDVDKPSSLRDAALSEMFDLRTAGLPHFVYQRREFAAKAAALSRSFLEPGH 229
            TP +++D+EGT  R+RG  D   F+ +T LFA+ +ADV+++N+W +D+GR       +LR++FE  ++++             P+++                VL+ V+RD   +  FE L +  R ++E++WR + KP    ++A++++F+L+   LPH+ ++   F A+A AL   F  P +
Sbjct:   84 TPTLVMDLEGTDGRERGEED-TAFEKQTALFAMASADVLLVNMWCNDIGREQASGKPLLRTIFEVNLKVFS------------PEKK---------------TVLLFVIRD-RSKTPFERLVENLRGDLESIWRGITKPERYANSAITDLFELKFTSLPHYEHEHELFVAEAKALRARFDAPAN 238          
BLAST of mRNA_L-elsbetiae_contig12201.1839.1 vs. uniprot
Match: A0A150GCH0_GONPE (Protein ROOT HAIR DEFECTIVE 3 homolog n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GCH0_GONPE)

HSP 1 Score: 105 bits (262), Expect = 1.050e-21
Identity = 58/201 (28.86%), Postives = 104/201 (51.74%), Query Frame = 0
Query:   41 PATAPTPLVLVDVEGTQSRDRGGVDGMEFDSRTTLFAVVAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLYEGGGQDGDGGDGVPQERGEGGGAVAGGPARFPKVLMLVLRDVEEEEHFEALDKAARANMEALWRDVDKPSSLRDAALSEMFDLRTAGLPHFVYQRREFAAKAAALSRSFLEPGHESFVF-PTPLPG 240
            P  A T ++++D+EG+  R+RG  D   F+ ++ LFA+  ADV+++N+W HD+GR  G    +L+++F+  ++L+             P+            P R   VL+ V+RD +       L +   A++E +W  + KP++ +D+ + + F+++ A L HF  +  +F A A  L R F   G +S +     LPG
Sbjct:   82 PKVADTTVLVMDLEGSDGRERGE-DDTNFERQSALFALAVADVLLVNIWCHDIGREHGSGKPLLKTIFQVNLKLF------------APE------------PDRKKSVLLFVIRD-KTRTPLPKLTEVLAADLERMWESIAKPAAYKDSKMGDFFEVKYAALSHFEERYEDFQADAVTLRRRFSPDGDDSLIHGEEKLPG 256          
BLAST of mRNA_L-elsbetiae_contig12201.1839.1 vs. uniprot
Match: L1IRJ1_GUITC (GB1/RHD3-type G domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IRJ1_GUITC)

HSP 1 Score: 101 bits (251), Expect = 2.390e-21
Identity = 53/187 (28.34%), Postives = 101/187 (54.01%), Query Frame = 0
Query:   48 LVLVDVEGTQSRDRGGVDGMEFDSRTTLFAVVAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLYEGGGQDGDGGDGVPQERGEGGGAVAGGPARFPKVLMLVLRDVEEEEHFEALDKAARANMEALWRDVDKPSSLRDAALSEMFDLRTAGLPHFVYQRREFAAKAAALSRSFLEPGHESFVF 234
            ++++DVEGT  R++   D   F+ ++ LF++   D++M+N+W H+VGR +     ++++V E  +RL   GG                   V    A+   +L+ VLRD ++    E L +    ++E +W+DV KP++  DA L++ F++    LPH+VY + ++  +  +L+R F +   E ++F
Sbjct:   74 ILVMDVEGTDGREKE--DQKAFEGKSALFSLALTDIMMINMWMHEVGRFNAANLPLIKTVIEAHLRLMFAGGY------------------VEKHVAK--PLLLFVLRDCDDSTPVERLKEDVVKDIEKIWKDVSKPANFPDAQLTDFFNIECKALPHYVYCKEQWKEEVESLARQFDDDAREDYIF 238          
BLAST of mRNA_L-elsbetiae_contig12201.1839.1 vs. uniprot
Match: A0A1M2VDA5_TRAPU (Protein SEY1 n=2 Tax=Trametes TaxID=5324 RepID=A0A1M2VDA5_TRAPU)

HSP 1 Score: 104 bits (259), Expect = 2.560e-21
Identity = 60/187 (32.09%), Postives = 98/187 (52.41%), Query Frame = 0
Query:   48 LVLVDVEGTQSRDRGGVDGMEFDSRTTLFAVVAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLYEGGGQDGDGGDGVPQERGEGGGAVAGGPARFPKVLMLVLRDVEEEEHFEALDKAARANMEALWRDVDKPSSLRDAALSEMFDLRTAGLPHFVYQRREFAAKAAALSRSFLEPGHESFVF 234
            L+++DVEGT  R+RG  +  +F+ ++ LF++ +++V+++NLW H VG   G    +L++VFE  + L+         G   P  R +              +L+ V+RD         L     A+M+ +W  + KP  L+D  LS+ FDL  A LPH +    +F ++A ALSR FL+   E +VF
Sbjct:  133 LLVMDVEGTDGRERG--EDQDFERKSALFSLASSEVLIVNLWEHQVGLYQGANMGLLKTVFEVNLGLF---------GKKTPDGRNQ------------RTLLLFVIRDHIGTTPLANLQTTLSADMQKIWESLSKPPELKDKQLSDYFDLSFAALPHKILAADKFESEAKALSRRFLDKTKEDYVF 296          
BLAST of mRNA_L-elsbetiae_contig12201.1839.1 vs. uniprot
Match: G0U4J1_TRYVY (GB1/RHD3-type G domain-containing protein n=1 Tax=Trypanosoma vivax (strain Y486) TaxID=1055687 RepID=G0U4J1_TRYVY)

HSP 1 Score: 103 bits (258), Expect = 3.470e-21
Identity = 61/195 (31.28%), Postives = 103/195 (52.82%), Query Frame = 0
Query:   46 TPLVLVDVEGTQSRDRGGVDGMEFDSRTTLFAVVAADVIMLNLWAHDVGRADGQAYSVLRSVFEEAVRLYEGGGQDGDGGDGVPQERGEGGGAVAGGPARFPKVLMLVLRDVEEEE---HFEALDKAARANMEALWRDVDKPSSLRDAALSEMFDLRTAGLPHFVYQRREFAAKAAALSRSFLEPGHESFVFPTP 237
            +PL +VD EGT   +RG  +   F+ + +LFA+  ADV+++N+WA DVGR +    S+LR+VFE  ++L+          D V +E+                 L++VLRD  +++   HF    K  R +++ +W ++ KP +  +  +  +F+LR   LPH+  QR EF          F  PG+++F+F +P
Sbjct:  131 SPLFVVDFEGTDGIERG--ENQNFERQLSLFALSVADVLIINMWAVDVGRFNAANMSLLRTVFEVNLQLF-------SRADYVAEEK---------------PTLLVVLRDFTDDDATPHF----KTVRESLDKIWSNIQKPEAFAETYIDALFELRYHCLPHYKLQRAEFNKATQEFREWFTSPGNKNFLFRSP 297          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12201.1839.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCC3_ECTSI1.130e-11274.61RHD3c, RHD3/Sey1 family GTPase involved in the ER-... [more]
A0A6H5KVA5_9PHAE1.560e-8972.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3B1K6_9EUKA1.630e-2231.38Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A1X0SBX9_RHIZD7.480e-2230.48Protein SEY1 n=5 Tax=Rhizopus TaxID=4842 RepID=A0A... [more]
G0UYJ2_TRYCI9.380e-2233.16GB1/RHD3-type G domain-containing protein n=1 Tax=... [more]
A4RVH4_OSTLU1.040e-2129.89Protein ROOT HAIR DEFECTIVE 3 homolog n=2 Tax=Ostr... [more]
A0A150GCH0_GONPE1.050e-2128.86Protein ROOT HAIR DEFECTIVE 3 homolog n=1 Tax=Goni... [more]
L1IRJ1_GUITC2.390e-2128.34GB1/RHD3-type G domain-containing protein n=1 Tax=... [more]
A0A1M2VDA5_TRAPU2.560e-2132.09Protein SEY1 n=2 Tax=Trametes TaxID=5324 RepID=A0A... [more]
G0U4J1_TRYVY3.470e-2131.28GB1/RHD3-type G domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 21..233
e-value: 3.5E-5
score: 25.1
NoneNo IPR availablePANTHERPTHR45923FAMILY NOT NAMEDcoord: 48..291
NoneNo IPR availablePANTHERPTHR45923:SF2PROTEIN SEY1coord: 48..291
IPR008803RHD3/Sey1PFAMPF05879RHD3coord: 149..291
e-value: 3.9E-13
score: 48.5
coord: 47..115
e-value: 3.0E-14
score: 52.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 46..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12201contigL-elsbetiae_contig12201:454..4711 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12201.1839.1mRNA_L-elsbetiae_contig12201.1839.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12201 454..4711 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12201.1839.1 ID=prot_L-elsbetiae_contig12201.1839.1|Name=mRNA_L-elsbetiae_contig12201.1839.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=293bp
SSSSSSPSAAVAPGRKKRRAKSTAAKGAAAAASVPAPPAAPATAPTPLVL
VDVEGTQSRDRGGVDGMEFDSRTTLFAVVAADVIMLNLWAHDVGRADGQA
YSVLRSVFEEAVRLYEGGGQDGDGGDGVPQERGEGGGAVAGGPARFPKVL
MLVLRDVEEEEHFEALDKAARANMEALWRDVDKPSSLRDAALSEMFDLRT
AGLPHFVYQRREFAAKAAALSRSFLEPGHESFVFPTPLPGQLAEGGDEGR
VRQRADDPGGRAGRQQAVVPLSMLRPRLEGIWASASSNRRLAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008803RHD3/Sey1
IPR027417P-loop_NTPase