prot_L-elsbetiae_contig1220.1836.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1220.1836.1
Unique Nameprot_L-elsbetiae_contig1220.1836.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length486
Homology
BLAST of mRNA_L-elsbetiae_contig1220.1836.1 vs. uniprot
Match: D8LJR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR3_ECTSI)

HSP 1 Score: 391 bits (1004), Expect = 5.080e-126
Identity = 301/499 (60.32%), Postives = 332/499 (66.53%), Query Frame = 0
Query:    1 MATRIGLLRTRGRSRGAQLLRGRQQICCSTISGMGSNASVRLLSRLSSSSH---AVVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKALFSSTAR----PSQAGVEDEARVRSS------EPAQMTFDGGSNDDRLASLDDGDKYPDFVDLRLAEADKLFPEGLAGGGQGALERATTGGTSTALLHREAADALIHSLDDFAAAAAXXGAGEAPSSSPEGSTGGAPFGIEGTSSEKWSKVFKARRYGNPAPAAAGEEDGDNDAMSGXXXXXXXXXXXXXXXXNGEDDIVGDVRAXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDTASEEGAEPEEEGVEGNEKGKKEILGNGPIWEEMKALAESKRRALKNVRRVRVQPGQRSYLLTGRRGSGKSCVLNQAVLHARSTGWIVLFVPDARNLVQKGIYCQPSPILEGLYDLPVQSLKRLKTLRDAHGDQLKEISIKDPEVLARHGEAKTLLDVMDRGLADE 486
            MATR GL+R RG S  AQL+  + Q   S+ISG      VRLL+RLSSSS    A+ GS                                     KALFSST      P +   +D     SS      +P + TFDGG+NDDRLA LDDGDKY DF DLRLAEA+ +FPEGLAGGGQGALERA  GGTSTALL REAADALIHSLD FA               PE      PFGIEGTSSE W KV +AR+YG+       ++DG       XXXXXXXXXXXXXXXX            XXXXXXXXXXXXXXXXXXXXXXXXXXX           PE+E  +G E   K++LG+GP+WEEMKALAESKR+ LK VRRV +QPGQRSYLLTGRRGSGKSCVL+ AVLHARSTGWIVLFVPD RNLVQKGIYCQPSP+LEGLYDLPVQS+KRLKTLR+AHGDQLK ISIKDPEVL RH  AKTLLDVMD GLAD+
Sbjct:    1 MATRFGLIRARGHSCRAQLVHDQLQ---SSISG------VRLLARLSSSSSRSTALKGSASGSSSSAPLGFRPPAHRHQYPASSIFLGRRDSGSCGKALFSSTTATRPAPEEGAAQDSDPGHSSSSSSGSKPGRKTFDGGNNDDRLARLDDGDKYEDFFDLRLAEAETIFPEGLAGGGQGALERAMAGGTSTALLRREAADALIHSLDAFA---------------PEDGGAAPPFGIEGTSSENWRKVSEARQYGS-------QQDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XGPEQEEGKGGED--KKVLGSGPVWEEMKALAESKRKPLKGVRRVVIQPGQRSYLLTGRRGSGKSCVLDHAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLEGLYDLPVQSMKRLKTLREAHGDQLKNISIKDPEVLGRHEGAKTLLDVMDMGLADQ 463          
BLAST of mRNA_L-elsbetiae_contig1220.1836.1 vs. uniprot
Match: A0A6H5KXH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXH7_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 5.080e-75
Identity = 254/498 (51.00%), Postives = 283/498 (56.83%), Query Frame = 0
Query:    1 MATRIGLLRTRGRSRGAQLLRGRQQICCSTISGMGSNASVRLLSRLSSSSH--AVVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKALFSSTA--RPS--QAGVEDEARVRSS------EPAQMTFDGGSNDDRLASLDDGDKYPDFVDLRLAEADKLFPEGLAGGGQGALERATTGGTSTALLHREAADALIHSLDDFAAAAAXXGAGEAPSSSPEGSTGGAPFGIEGTSSEKWSKVFKARRYGNPAPAAAGEEDGDNDAMSGXXXXXXXXXXXXXXXXNGEDDIVGDVRAXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDTASEEGAEPEEEGVEGNEKGKKEILGNGPIWEEMKALAESKRRALKNVRRVRVQPGQRSYLLTGRRGSGKSCVLNQAVLHARSTGWIVLFVPDARNLVQKGIYCQPSPILEGLYDLPVQSLKRLKTLRDAHGDQLKEISIKDPEVLARHGEAKTLLDVMDRGLADE 486
            MATR+GL+R RG S  AQL+ G  Q   S+ISG      VRLL+RLSSSS   AV GS                                     KALFSST   RP+  +   +D    RSS      +P + TFDG  NDDRLA LDDGDKY DF DLRLAEA+ +FPEGLAGG QGALERA  GGTSTALL REAADALIHSLD FA               PE      PFGIEGTSSE W K  +AR+YG+             D    XXXXXXXXXXXXXXXX            XXXXXXXXXXXXXXXXXXXXXXXXXXX       EG E EE    G  +  K++LG+GP+WEEMKALAESKR+ LK VRRV +QPGQ         G G           AR+   I+   P +           P P+L        QS+KRLKTLR+AHGDQLK ISIKDPEVL RH  AKTLLDVMD GLAD+
Sbjct:    1 MATRVGLIRARGHSCRAQLVHGPLQ---SSISG------VRLLARLSSSSRNTAVKGSPSGRSSSAPLAFRPPDRRHQYPASSIFLGRSDSGSGGKALFSSTTATRPAHEEGAAQDSDPGRSSXXXXXXKPGRKTFDGKDNDDRLARLDDGDKYEDFFDLRLAEAETIFPEGLAGGRQGALERAMAGGTSTALLRREAADALIHSLDAFA---------------PEHGGAVPPFGIEGTSSENWRKACEARQYGSQ-----------QDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPEQEE----GRGREDKKVLGSGPVWEEMKALAESKRKPLKGVRRVVIQPGQ---------GGGAP---------ARAASSIM---PSSTPAPAHPTLRSPPPVL--------QSMKRLKTLREAHGDQLKNISIKDPEVLGRHEGAKTLLDVMDMGLADQ 430          
BLAST of mRNA_L-elsbetiae_contig1220.1836.1 vs. uniprot
Match: A0A7S4RCC4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RCC4_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.330e-5
Identity = 31/87 (35.63%), Postives = 50/87 (57.47%), Query Frame = 0
Query:  374 QPGQRSYLLTGRRGSGKSCVLNQAVLHARSTGWIVLFVPDARNLVQKGIYCQPSPILEGLYDLPVQSLKRLKTLRDAHGDQLKEISI 460
            + G +   + G+RG GK+  L   V  AR++G IVL++PD   L + G Y +P+  LEGL+DLPV + +    L  +H   + +I +
Sbjct:  310 EEGGKRVFVHGKRGVGKTAALAAIVASARTSGNIVLYLPDGDRLRKLGFYIEPNTHLEGLFDLPVLAKEICSQLLISHEHDMGDIMV 396          
BLAST of mRNA_L-elsbetiae_contig1220.1836.1 vs. uniprot
Match: A0A1Z5JXK7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JXK7_FISSO)

HSP 1 Score: 58.2 bits (139), Expect = 2.530e-5
Identity = 30/92 (32.61%), Postives = 53/92 (57.61%), Query Frame = 0
Query:  379 SYLLTGRRGSGKSCVLNQAVLHARSTGWIVLFVPDARNLVQKGIYCQPSPILEGLYDLPVQSLKRLKTLRDAHGDQLKEISIKDPE-VLARH 469
            S L++G +G GK+  +   V  ARS+G++VL++P+   L Q G Y +P+P  +G++D+P+ S +        H   +  I +  P+ V+A H
Sbjct:  292 SILVSGCQGVGKTAAVAAIVASARSSGYLVLYLPNGDQLHQNGFYVEPNPQKKGIFDIPIMSQRACDDFLKTHKSDM--IGLNVPKGVIAEH 381          
BLAST of mRNA_L-elsbetiae_contig1220.1836.1 vs. uniprot
Match: A0A7S2XP72_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XP72_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 8.550e-5
Identity = 30/88 (34.09%), Postives = 50/88 (56.82%), Query Frame = 0
Query:  382 LTGRRGSGKSCVLNQAVLHARSTGWIVLFVPDARNLVQKGIYCQPSPILEGLYDLPVQSLKRLKTLRDAHGDQLKEISIKDPEVLARH 469
            +TGR+G GKS  L   V  AR++G+IV+++PD   + + G Y +PS    G YDLP  + +    L + H   L ++ +  PE  +++
Sbjct:  431 VTGRQGMGKSASLAAIVASARTSGYIVMYMPDGDRMRKLGKYIEPSSKRRGFYDLPFLAKEVCGALLENHESDLHDMVV-SPETCSKY 517          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1220.1836.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LJR3_ECTSI5.080e-12660.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXH7_9PHAE5.080e-7551.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4RCC4_9STRA1.330e-535.63Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A1Z5JXK7_FISSO2.530e-532.61Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S2XP72_9STRA8.550e-534.09Hypothetical protein n=1 Tax=Attheya septentrional... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019368Ribosomal protein S23/S29, mitochondrialPFAMPF10236DAP3coord: 378..484
e-value: 3.8E-14
score: 52.6
IPR019368Ribosomal protein S23/S29, mitochondrialPANTHERPTHR12810MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29coord: 68..483
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 349..417

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1220contigL-elsbetiae_contig1220:221..4195 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1220.1836.1mRNA_L-elsbetiae_contig1220.1836.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1220 221..4236 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1220.1836.1 ID=prot_L-elsbetiae_contig1220.1836.1|Name=mRNA_L-elsbetiae_contig1220.1836.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=486bp
MATRIGLLRTRGRSRGAQLLRGRQQICCSTISGMGSNASVRLLSRLSSSS
HAVVGSATNNSSCSASASAARYSRQQQFPSSLFSAINNSSSCCKALFSST
ARPSQAGVEDEARVRSSEPAQMTFDGGSNDDRLASLDDGDKYPDFVDLRL
AEADKLFPEGLAGGGQGALERATTGGTSTALLHREAADALIHSLDDFAAA
AAAAGAGEAPSSSPEGSTGGAPFGIEGTSSEKWSKVFKARRYGNPAPAAA
GEEDGDNDAMSGTAAATAAAAAAGDAPGNGEDDIVGDVRAAAAEGAAAAA
AAAEAVTAAAMAAAGGGTGDTASEEGAEPEEEGVEGNEKGKKEILGNGPI
WEEMKALAESKRRALKNVRRVRVQPGQRSYLLTGRRGSGKSCVLNQAVLH
ARSTGWIVLFVPDARNLVQKGIYCQPSPILEGLYDLPVQSLKRLKTLRDA
HGDQLKEISIKDPEVLARHGEAKTLLDVMDRGLADE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019368Ribosomal_S23/S29_mit
IPR027417P-loop_NTPase