prot_L-elsbetiae_contig122.1834.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig122.1834.1
Unique Nameprot_L-elsbetiae_contig122.1834.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length557
Homology
BLAST of mRNA_L-elsbetiae_contig122.1834.1 vs. uniprot
Match: D7G0E3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0E3_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 1.010e-13
Identity = 176/575 (30.61%), Postives = 234/575 (40.70%), Query Frame = 0
Query:   18 AVAPSCRIDLRGCSRRPLTMPLAGTG-WGDSRDLSPT---PTGE-VPSRYDRR------RAGRRRRRGTPAAGRVGIPGTSATPGRLDA----RRAGGRALHLTQQTAGAESTDLRGVVGARPRRPRPTLFPKRARRDDGCLLHPLNSEDQDADGLASLLSVSRRIFSKAEGFEETENRSEGPPCASRTSAQRHKPGGVGAGEGCSGKPGQSAESQPPAVSRAPAGNTVGSAAATTSYSSPPPEDRD---HSPSSTSRRGTPWRRAPLRHKTPSGATSRI-----KTALSAAKAVEESGGLVSAHHANPGKED-------TEEETYPDGELEPSEPLPAPLITNETLETPDREQQANLMTGELVYNTCISSEAPDDGDAVL----QTIGASTQ----LIPVARKTSAVVADATTWDEAETNEYYAG---WAYDEATSSWYATGAPAVTANGSAEIGDGRDQADRXXXXXXXXXXXXQDESVWREQDP-HQPSHIEASEHEAFTSEDGQDQRAPGEGRVKLMIAPRGERTEAICETLLNQGIEREN----SESDEAGGLLARRIKTLELALHSQSR 546
            A +P C IDLRGCSRRPL +PLA  G +     LSP    PT E  PS   R       R   R + G   A       TS+ P R+ A    R   G+   L +    A       ++G+  RRPR T   K A R + C+  P  SE Q+ + L SLLS+SRRIFS+AEGFEET N  E       T A R      G     SG          P  S++    T   A    S+S+  PE+ D     PSS  +  T       R + P  +           A SAA + E     VSA H    + D       T  +TYP  E          +IT       D +  A   T +  +    +S  P    A+     QT   +T+     +  A K  A V DA +  + + + Y  G   W YDEAT++WYA   P      +  +GD       XXXXXXXX    Q+ S      P H  +     +    T ED    R  G  R+       G   EA+   +  +   R      S++  AGGL+ +RI+ LELAL  + R
Sbjct:  876 AASPICTIDLRGCSRRPLPLPLAAVGDFEQGERLSPQKPYPTVEGSPSEQQRHGCGGVGRGSDRHQAGD--AETCVNQNTSSVPRRVHAASTSRGQDGQVTRLMRTGLAAN------LMGSSSRRPRYTGRRKPASRGEDCVFAP-KSEAQELEDLTSLLSISRRIFSRAEGFEETHNLPEERRTQGATRAPRSPSSENGKRPDSSGTE--------PDTSKSGLPGTALVAGLGRSHSTNAPEETDKCGQMPSSAGKGDTTASTKAARAERPHDSREAAIEGEGYPADSAAPSGEAPPASVSATHPRDMQCDDRTPEVPTTAKTYPHEENRV-------VITGNPFPAEDFDAIACRSTDDPPHEPAAASPPPRAYPAICADARQTTSTTTEGESHYLEGAEK-DADVDDAASAGDVQYSTYQNGEDGWIYDEATAAWYAVD-PLSYGTAAEGLGDSGGXXXXXXXXXXXXQDGPQESSCVLVPTPTHVDTENTGEKDHGATGEDRSGSRWRGSRRIP------GRSLEALGSGVREKDAVRSTGMVESDASGAGGLIEKRIEALELALQDKGR 1418          
BLAST of mRNA_L-elsbetiae_contig122.1834.1 vs. uniprot
Match: A0A6H5KFK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK5_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.500e-12
Identity = 172/593 (29.01%), Postives = 238/593 (40.13%), Query Frame = 0
Query:   18 AVAPSCRIDLRGCSRRPLTMPLAGTG-WGDSRDLSP-TPTGEVPSRYDRRRAGRRRRRGTPAAGR------VGIP------GTSATPGRLDARRAGGRALHLTQQTAGAESTDLRGVVGARPRRPRPTLFPKRARRDDGCLLHPLN---SEDQDADGLASLLSVSRRIFSKAEGFEETENRSEGPPCASRTSAQRHKPGGVGAGEGCSGKPGQSAESQPPAVSRAPAGNTVGSAAATTSYSSPPPEDRDHSPSSTSRRGTPWRRAPLRHKTPSGATSRIKTALSAAKAVEESGGLVSAHHANPGKEDTEEETYPDGELEPSEPLPAPLIT----------NETLETPD------REQQANLMTG-----------------ELVYNTCISSEAPDDGDAVLQTI---------GASTQLIPVARKTSAVVADATTWDEAETNEYYAG---WAYDEATSSWYATGAPAVTANGSAEIGDGRDQADRXXXXXXXXXXXXQDES-VWREQDPHQPSHIEASEHEAFTSEDGQDQRAPGEGRVKLMIAPRGERT-EAICETLLNQGIERENSESDEAGGLLARRIKTLELALHSQSR 546
            A +P C IDLRGC RRPL +PLA  G +     LSP TP+   P+R D   +  ++R G    GR      VG         TS+ P R DA  A   + H  Q T    +     ++G+  RRPR T   K A R +  L  P +   SE Q+ + L SLLS+SRRIF + +GFEET N  E       T A R      G     SG    ++++  P         TV  A    S+S+  PE+ D                    + PS A     TA + A   E         + + GKE  E E YP     PS   P   I+          + T E P        E+   ++TG                 +  +    SS  P    A+                +  +  A K +AVV DA T  + + + Y  G   WAYDEAT+ WY+   P      +  +GD       XXXXXXXX    QD S V      H  +     +    T ED  + R  G  R+       G R  +A+  T + +      ++++ AGGL+ +RI+ LELAL  + R
Sbjct:  552 AASPICTIDLRGCPRRPLPLPLAAVGDFEQGEHLSPPTPS---PTRVDGSPS-EQQRHGCGGVGRGSDRHQVGHAETCVNQNTSSVPRRFDA--ASTSSGHNGQVTRLMRTGLAANLMGSSSRRPRYTRRRKPASRGEDRLFAPKSAPKSEAQELEDLTSLLSISRRIFGRTKGFEETHNLPEECRTQGATRAPRSPSSENGKRPDSSGTETDTSKAGLP--------GTVLVAGLGRSHSTNEPEETDKC-----------------DQMPSSAGKGDTTASTKAACAERPQDGREISYVSTGKEAIEGEGYPADNAAPSGQAPPASISATHPRGVQCDDRTPEVPPTAEPYPHEESRVVITGTPFPAQDFDAIACRSVDDPPHEPATSSPPPRAFPAICADARXXXXXXXXXGESHYLEGAEK-AAVVDDAATAGDVQYSNYQNGEDGWAYDEATAVWYSVD-PLTYGTTAEGLGDSGGXXXXXXXXXXXXQDGPQDASCVLVPTLTHVDTENTGEKDNGATGEDRSESRRKGSRRMPRRSLGSGVREKDAVRSTGMVE------TDANGAGGLIEKRIEALELALQDKGR 1105          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig122.1834.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0E3_ECTSI1.010e-1330.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFK5_9PHAE1.500e-1229.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig122contigL-elsbetiae_contig122:51420..53499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig122.1834.1mRNA_L-elsbetiae_contig122.1834.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig122 51263..53548 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig122.1834.1 ID=prot_L-elsbetiae_contig122.1834.1|Name=mRNA_L-elsbetiae_contig122.1834.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=557bp
MQPSSVLETSTSALFTAAVAPSCRIDLRGCSRRPLTMPLAGTGWGDSRDL
SPTPTGEVPSRYDRRRAGRRRRRGTPAAGRVGIPGTSATPGRLDARRAGG
RALHLTQQTAGAESTDLRGVVGARPRRPRPTLFPKRARRDDGCLLHPLNS
EDQDADGLASLLSVSRRIFSKAEGFEETENRSEGPPCASRTSAQRHKPGG
VGAGEGCSGKPGQSAESQPPAVSRAPAGNTVGSAAATTSYSSPPPEDRDH
SPSSTSRRGTPWRRAPLRHKTPSGATSRIKTALSAAKAVEESGGLVSAHH
ANPGKEDTEEETYPDGELEPSEPLPAPLITNETLETPDREQQANLMTGEL
VYNTCISSEAPDDGDAVLQTIGASTQLIPVARKTSAVVADATTWDEAETN
EYYAGWAYDEATSSWYATGAPAVTANGSAEIGDGRDQADRGWRFDEQSAT
WYQDESVWREQDPHQPSHIEASEHEAFTSEDGQDQRAPGEGRVKLMIAPR
GERTEAICETLLNQGIERENSESDEAGGLLARRIKTLELALHSQSRSLRK
PDRAET*
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