prot_L-elsbetiae_contig12173.1809.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12173.1809.1
Unique Nameprot_L-elsbetiae_contig12173.1809.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length318
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig12173.1809.1 vs. uniprot
Match: D8LIV7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIV7_ECTSI)

HSP 1 Score: 311 bits (798), Expect = 5.010e-97
Identity = 212/304 (69.74%), Postives = 247/304 (81.25%), Query Frame = 0 
Query:    1 LSLQVAALRRQQG-GVAATATAGGAEAAEAEASGPSWDTPAARELRAKLKSLEREARKRETVLQGLENERRNATALEDEVMTLKAALQRAQERLKAAITAETDNAAVRDEKEEWSLVFSRAVEEDKKAASARQQRPHGGGRKPAGAXXXXXXXXVALR-PRPTPLDALRLLREAQEERSLSVKELTALRLRYDCDHERLARVEQELEQARERXXXXXXXXXXXXXXXXXLKRRCRSAEQEVDAQKELIDSYERDNFRKPAGEGWLSDHAALESALAAAKDETKSLRREAEGQVSALEAGRLRGR 302
            LSL+VAALRR+QG G+AA     G+E +   +S  SWDTPAARELRAK+ SLEREARKRE VLQGLE++RRNA ALEDEV TLK+ L+RA++RL +A+ AETDNAA++DEKEEWSLVFSRA+ E++KAAS R+      GR+PA A              RPTPL ALRLLREAQEERSL+VKELTALRLR + +H RLA+VEQEL+  +ER   XXXXXXXXXXXX  L+RRCRS+E+EV+AQKELI+SYERD FRKPAGE WLSDHAALESALAAAK+E +SLRR AEGQVSALEAGRLRGR
Sbjct:  229 LSLEVAALRRKQGVGLAAGGPTEGSETSAGASS--SWDTPAARELRAKVTSLEREARKREAVLQGLESDRRNAIALEDEVATLKSTLKRAEDRLASAVKAETDNAAIKDEKEEWSLVFSRALNEEQKAASLRRII----GREPAEAGAGEEEGKEGGGGARPTPLVALRLLREAQEERSLAVKELTALRLRNEHNHTRLAKVEQELKNEKERGESXXXXXXXXXXXXDKLERRCRSSEKEVEAQKELINSYERDTFRKPAGETWLSDHAALESALAAAKEEAESLRRAAEGQVSALEAGRLRGR 526
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12173.1809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIV7_ECTSI5.010e-9769.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 266..286
NoneNo IPR availableCOILSCoilCoilcoord: 296..316
NoneNo IPR availableCOILSCoilCoilcoord: 41..99
NoneNo IPR availableCOILSCoilCoilcoord: 190..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12173contigL-elsbetiae_contig12173:439..5620 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12173.1809.1mRNA_L-elsbetiae_contig12173.1809.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12173 439..5620 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12173.1809.1 ID=prot_L-elsbetiae_contig12173.1809.1|Name=mRNA_L-elsbetiae_contig12173.1809.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=318bp
LSLQVAALRRQQGGVAATATAGGAEAAEAEASGPSWDTPAARELRAKLKS
LEREARKRETVLQGLENERRNATALEDEVMTLKAALQRAQERLKAAITAE
TDNAAVRDEKEEWSLVFSRAVEEDKKAASARQQRPHGGGRKPAGAGEGGG
GDGVALRPRPTPLDALRLLREAQEERSLSVKELTALRLRYDCDHERLARV
EQELEQARERAESVHVRAEELDVELDKLKRRCRSAEQEVDAQKELIDSYE
RDNFRKPAGEGWLSDHAALESALAAAKDETKSLRREAEGQVSALEAGRLR
GRLAKAEAALEAAIAER*
back to top