prot_L-elsbetiae_contig12154.1794.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig12154.1794.1
Unique Name	prot_L-elsbetiae_contig12154.1794.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	76

Homology

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BLAST of mRNA_L-elsbetiae_contig12154.1794.1 vs. uniprot
Match: A0A0U2LTP8_9PHAE (ATP synthase subunit 9, mitochondrial n=153 Tax=Stramenopiles TaxID=33634 RepID=A0A0U2LTP8_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 3.300e-36
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKEELFRIAILGFALTEAIALFALMMAFLILFAL 75
            MLVQAAKLLGAGLATIGLAGAGVGIGTVF ALVLGTARNPSLK+ELFRIAILGFALTEAIALFALMMAFLILFAL
Sbjct:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFAALVLGTARNPSLKDELFRIAILGFALTEAIALFALMMAFLILFAL 75

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BLAST of mRNA_L-elsbetiae_contig12154.1794.1 vs. uniprot
Match: Q3S284_THAPS (ATP synthase subunit 9, mitochondrial n=16 Tax=Bacillariophyta TaxID=2836 RepID=Q3S284_THAPS)

HSP 1 Score: 117 bits (292), Expect = 7.490e-33
Identity = 65/75 (86.67%), Postives = 73/75 (97.33%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKEELFRIAILGFALTEAIALFALMMAFLILFAL 75
            ML+QAAK +GAGLATIGLAGAGVGIGTVFGALV+G +RNPSLK+ELF++AILGFALTEAIALF+LMMAFLILFAL
Sbjct:    1 MLLQAAKFVGAGLATIGLAGAGVGIGTVFGALVIGVSRNPSLKDELFKLAILGFALTEAIALFSLMMAFLILFAL 75

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BLAST of mRNA_L-elsbetiae_contig12154.1794.1 vs. uniprot
Match: A0A8F0FD85_9PHAE (ATP synthase subunit 9, mitochondrial n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FD85_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 1.060e-32
Identity = 65/74 (87.84%), Postives = 71/74 (95.95%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKEELFRIAILGFALTEAIALFALMMAFLILFA 74
            MLVQA+K+LGAGLATIGL GAGVGIGTVFGALVLG +RNP+LK+ELF+ AILGFALTEAIALFALMMAFLILFA
Sbjct:    1 MLVQASKILGAGLATIGLTGAGVGIGTVFGALVLGVSRNPTLKDELFKFAILGFALTEAIALFALMMAFLILFA 74

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BLAST of mRNA_L-elsbetiae_contig12154.1794.1 vs. uniprot
Match: A0A2U9GIF0_9STRA (ATP synthase subunit 9, mitochondrial n=3 Tax=Eukaryota TaxID=2759 RepID=A0A2U9GIF0_9STRA)

HSP 1 Score: 114 bits (286), Expect = 6.160e-32
Identity = 63/74 (85.14%), Postives = 72/74 (97.30%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKEELFRIAILGFALTEAIALFALMMAFLILFA 74
            ML+QAAK +GAGLATIGLAGAGVGIGTVFGALV+G +RNPSLK+E+FR+AILGFALTEAIALFALM+AFL+LFA
Sbjct:    1 MLLQAAKCVGAGLATIGLAGAGVGIGTVFGALVIGISRNPSLKDEMFRMAILGFALTEAIALFALMIAFLVLFA 74

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BLAST of mRNA_L-elsbetiae_contig12154.1794.1 vs. uniprot
Match: A0A8E8U4W3_9PHAE (ATP synthase subunit 9, mitochondrial n=2 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8U4W3_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 6.160e-32
Identity = 61/75 (81.33%), Postives = 73/75 (97.33%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKEELFRIAILGFALTEAIALFALMMAFLILFAL 75
            ML+QA+KL+G GLATIGL GAGVGIGTVFG+L++GT+RNPS+KEELF++A+LGFALTEAIALFALM+AFLILFAL
Sbjct:    1 MLLQASKLIGGGLATIGLTGAGVGIGTVFGSLIIGTSRNPSMKEELFKLAVLGFALTEAIALFALMVAFLILFAL 75

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BLAST of mRNA_L-elsbetiae_contig12154.1794.1 vs. uniprot
Match: A0A649UBP4_AURAN (ATP synthase subunit 9, mitochondrial n=3 Tax=cellular organisms TaxID=131567 RepID=A0A649UBP4_AURAN)

HSP 1 Score: 112 bits (281), Expect = 3.570e-31
Identity = 62/75 (82.67%), Postives = 71/75 (94.67%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKEELFRIAILGFALTEAIALFALMMAFLILFAL 75
            M++QAAKL+GAGL+TIGL GAGVGIG+VF AL+LG +RNPSLK+ELFR+AILGFALTEAIALFALMM FLILFAL
Sbjct:    1 MILQAAKLIGAGLSTIGLVGAGVGIGSVFAALILGISRNPSLKDELFRVAILGFALTEAIALFALMMGFLILFAL 75

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BLAST of mRNA_L-elsbetiae_contig12154.1794.1 vs. uniprot
Match: D2Z269_HETAK (ATP synthase subunit 9, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=D2Z269_HETAK)

HSP 1 Score: 112 bits (281), Expect = 3.570e-31
Identity = 63/74 (85.14%), Postives = 70/74 (94.59%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKEELFRIAILGFALTEAIALFALMMAFLILFA 74
            ML+QAAK +GAGLATIGLAGAGVGIGTVF ALVLGT+RNPS+K++LFR AILGFALTEA ALFALM+AFLILFA
Sbjct:    1 MLLQAAKFVGAGLATIGLAGAGVGIGTVFSALVLGTSRNPSIKDDLFRFAILGFALTEATALFALMVAFLILFA 74

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BLAST of mRNA_L-elsbetiae_contig12154.1794.1 vs. uniprot
Match: A0A1J0RD98_9STRA (ATP synthase subunit 9, mitochondrial n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A1J0RD98_9STRA)

HSP 1 Score: 112 bits (280), Expect = 5.070e-31
Identity = 63/75 (84.00%), Postives = 71/75 (94.67%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKEELFRIAILGFALTEAIALFALMMAFLILFAL 75
            ML+QAAK +GAGLATIGLAGAG GIGTVFG+LVLG +RNP LK+ELF++AILGFALTEAIALFALM+AFLILFAL
Sbjct:    1 MLLQAAKCIGAGLATIGLAGAGAGIGTVFGSLVLGISRNPKLKDELFKMAILGFALTEAIALFALMIAFLILFAL 75

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BLAST of mRNA_L-elsbetiae_contig12154.1794.1 vs. uniprot
Match: A0A4Y5T8G9_9PHAE (ATP synthase subunit 9, mitochondrial n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A4Y5T8G9_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 5.070e-31
Identity = 63/74 (85.14%), Postives = 70/74 (94.59%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKEELFRIAILGFALTEAIALFALMMAFLILFA 74
            M  ++A+L+GAGLATIGLAGAGVGIGTVFGALVLGTARNPS+K +LFR AILGFALTEAIALFALMMAFLILF+
Sbjct:    1 MSYRSAQLIGAGLATIGLAGAGVGIGTVFGALVLGTARNPSIKNDLFRFAILGFALTEAIALFALMMAFLILFS 74

[Close]

BLAST of mRNA_L-elsbetiae_contig12154.1794.1 vs. uniprot
Match: A0A5B9IQ06_9STRA (ATP synthase subunit 9, mitochondrial n=1 Tax=Cafileria marina TaxID=2557541 RepID=A0A5B9IQ06_9STRA)

HSP 1 Score: 110 bits (276), Expect = 2.070e-30
Identity = 62/73 (84.93%), Postives = 69/73 (94.52%), Query Frame = 0

Query:    1 MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKEELFRIAILGFALTEAIALFALMMAFLILF 73
            ML+ AAKL+GAGLATIGLAGAGVGIG VFG+LVLG +RNP+ K+ELFR+AILGFALTEAIALFALMMAFLILF
Sbjct:    1 MLLSAAKLIGAGLATIGLAGAGVGIGNVFGSLVLGVSRNPNEKDELFRLAILGFALTEAIALFALMMAFLILF 73

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig12154.1794.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig12154.1794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0U2LTP8_9PHAE	3.300e-36	97.33	ATP synthase subunit 9, mitochondrial n=153 Tax=St...	[more]
Q3S284_THAPS	7.490e-33	86.67	ATP synthase subunit 9, mitochondrial n=16 Tax=Bac...	[more]
A0A8F0FD85_9PHAE	1.060e-32	87.84	ATP synthase subunit 9, mitochondrial n=1 Tax=Prot...	[more]
A0A2U9GIF0_9STRA	6.160e-32	85.14	ATP synthase subunit 9, mitochondrial n=3 Tax=Euka...	[more]
A0A8E8U4W3_9PHAE	6.160e-32	81.33	ATP synthase subunit 9, mitochondrial n=2 Tax=Phae...	[more]
A0A649UBP4_AURAN	3.570e-31	82.67	ATP synthase subunit 9, mitochondrial n=3 Tax=cell...	[more]
D2Z269_HETAK	3.570e-31	85.14	ATP synthase subunit 9, mitochondrial n=1 Tax=Hete...	[more]
A0A1J0RD98_9STRA	5.070e-31	84.00	ATP synthase subunit 9, mitochondrial n=4 Tax=Baci...	[more]
A0A4Y5T8G9_9PHAE	5.070e-31	85.14	ATP synthase subunit 9, mitochondrial n=1 Tax=Ishi...	[more]
A0A5B9IQ06_9STRA	2.070e-30	84.93	ATP synthase subunit 9, mitochondrial n=1 Tax=Cafi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000454	ATP synthase, F0 complex, subunit C	PRINTS	PR00124	ATPASEC	coord: 47..72 score: 56.49 coord: 9..28 score: 54.41 coord: 30..45 score: 43.87
IPR000454	ATP synthase, F0 complex, subunit C	PANTHER	PTHR10031	ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL	coord: 3..74
IPR000454	ATP synthase, F0 complex, subunit C	HAMAP	MF_01396	ATP_synth_c_bact	coord: 4..72 score: 14.952
IPR038662	F1F0 ATP synthase subunit C superfamily	GENE3D	1.20.20.10		coord: 1..75 e-value: 1.3E-31 score: 110.4
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 9..71 e-value: 2.0E-12 score: 47.2
None	No IPR available	PANTHER	PTHR10031:SF14	ATP SYNTHASE, SUBUNIT C, ISOFORM A	coord: 3..74
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 35..45
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..34
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 46..74
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 75..75
None	No IPR available	TMHMM	TMhelix		coord: 50..72
None	No IPR available	TMHMM	TMhelix		coord: 15..37
IPR020537	ATP synthase, F0 complex, subunit C, DCCD-binding site	PROSITE	PS00605	ATPASE_C	coord: 37..58
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 2..74

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig12154	contig	L-elsbetiae_contig12154:5134..5361 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig12154.1794.1	mRNA_L-elsbetiae_contig12154.1794.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig12154 5134..5361 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig12154.1794.1 ID=prot_L-elsbetiae_contig12154.1794.1|Name=mRNA_L-elsbetiae_contig12154.1794.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=76bp
MLVQAAKLLGAGLATIGLAGAGVGIGTVFGALVLGTARNPSLKEELFRIA
ILGFALTEAIALFALMMAFLILFAL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000454	ATP_synth_F0_csu
IPR038662	ATP_synth_F0_csu_sf
IPR002379	ATPase_proteolipid_c-like_dom
IPR020537	ATP_synth_F0_csu_DDCD_BS
IPR035921	F/V-ATP_Csub_sf