prot_L-elsbetiae_contig12154.1793.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig12154.1793.1
Unique Name	prot_L-elsbetiae_contig12154.1793.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	164

Homology

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BLAST of mRNA_L-elsbetiae_contig12154.1793.1 vs. uniprot
Match: A0A3G5FPP9_9PHAE (Ribosomal protein L6 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPP9_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 1.800e-97
Identity = 142/163 (87.12%), Postives = 151/163 (92.64%), Query Frame = 0

Query:    1 MTTPVYRLPTGVECSSNNGKVRVSGSNGTVVFDSVSSLYRKGNIVIFLPYLTPYYSSIFTQAVQGVVLGYTIELSLKGIGYRVREENKKLIFSLGYSQSVILKIPDNISVNINKKTFSLLSANFGALQNFATTIRSYRFPDSYKGSGVLYDGEIICCKEGKKT 163
            MT PVYRLP GVECSS NGKVRVSGSNGTVVF+SVS+LYRKGN+VIFLPYLTPYYSSIF QAVQGVVLGYTIELSLKGIGYRVREE+KKLIFSLGYS+ VIL +PD+ISV  NKKTFSLLSAN+G LQNFATTIRSYRFPDSYK SGVLY GEI+ CKEGKKT
Sbjct:    1 MTAPVYRLPIGVECSSKNGKVRVSGSNGTVVFNSVSNLYRKGNMVIFLPYLTPYYSSIFRQAVQGVVLGYTIELSLKGIGYRVREEDKKLIFSLGYSKPVILNMPDDISVKFNKKTFSLLSANYGVLQNFATTIRSYRFPDSYKASGVLYIGEIVICKEGKKT 163

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BLAST of mRNA_L-elsbetiae_contig12154.1793.1 vs. uniprot
Match: E6ZEQ4_ECTSI (Ribosomal protein L6 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZEQ4_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 1.070e-89
Identity = 131/163 (80.37%), Postives = 148/163 (90.80%), Query Frame = 0

Query:    1 MTTPVYRLPTGVECSSNNGKVRVSGSNGTVVFDSVSSLYRKGNIVIFLPYLTPYYSSIFTQAVQGVVLGYTIELSLKGIGYRVREENKKLIFSLGYSQSVILKIPDNISVNINKKTFSLLSANFGALQNFATTIRSYRFPDSYKGSGVLYDGEIICCKEGKKT 163
            MTTPV+RLP GV+CSSNNGKV VSG+ G VVFDSVS+L+RKG++VIFLPYLTPYYSSIF QAVQGVVLGYTIELSLKGIGYRVR+E +KLIFSLGYS+ VIL IP +IS+  NKKTFSL+SAN+G LQNFA++IRSYRFPDSYKG+GVLY  EII CKEGKKT
Sbjct:    1 MTTPVFRLPIGVKCSSNNGKVYVSGNKGRVVFDSVSNLHRKGDMVIFLPYLTPYYSSIFRQAVQGVVLGYTIELSLKGIGYRVRKEEEKLIFSLGYSKPVILDIPKDISIRFNKKTFSLISANYGTLQNFASSIRSYRFPDSYKGAGVLYADEIIVCKEGKKT 163

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BLAST of mRNA_L-elsbetiae_contig12154.1793.1 vs. uniprot
Match: A0A0U1XDA2_9PHAE (Ribosomal protein L6 n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1XDA2_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 4.360e-89
Identity = 126/163 (77.30%), Postives = 147/163 (90.18%), Query Frame = 0

Query:    1 MTTPVYRLPTGVECSSNNGKVRVSGSNGTVVFDSVSSLYRKGNIVIFLPYLTPYYSSIFTQAVQGVVLGYTIELSLKGIGYRVREENKKLIFSLGYSQSVILKIPDNISVNINKKTFSLLSANFGALQNFATTIRSYRFPDSYKGSGVLYDGEIICCKEGKKT 163
            MT PVYRLP GV+CSSNNGKV VSG+ G+VVF+SVS+LYRKG++VIFLP+LTPYYSSIFTQAVQGV+ GYTIELSLKGIGYRVREENKKLIFSLGYS+ V+L IP+++SV  NK+ FS+  AN+  LQNFATTIR YRFPDSYKGSG++Y+GEI+ CKEGKKT
Sbjct:    1 MTVPVYRLPIGVKCSSNNGKVSVSGTKGSVVFNSVSNLYRKGDMVIFLPFLTPYYSSIFTQAVQGVIFGYTIELSLKGIGYRVREENKKLIFSLGYSKPVVLDIPNDVSVIFNKQNFSISCANYSVLQNFATTIRRYRFPDSYKGSGIVYNGEIVVCKEGKKT 163

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BLAST of mRNA_L-elsbetiae_contig12154.1793.1 vs. uniprot
Match: Q2TUH0_9PHAE (Ribosomal protein L6 n=2 Tax=Desmarestia TaxID=31339 RepID=Q2TUH0_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 3.580e-88
Identity = 128/163 (78.53%), Postives = 143/163 (87.73%), Query Frame = 0

Query:    1 MTTPVYRLPTGVECSSNNGKVRVSGSNGTVVFDSVSSLYRKGNIVIFLPYLTPYYSSIFTQAVQGVVLGYTIELSLKGIGYRVREENKKLIFSLGYSQSVILKIPDNISVNINKKTFSLLSANFGALQNFATTIRSYRFPDSYKGSGVLYDGEIICCKEGKKT 163
            MTTPV+RLP GVEC+S++GKVRVSG+ G V+FDSVS+L+RKGN+VIFLPYLTPYYSSIFTQAV GV+LGYTIEL LKGIGYRVREE  KLIFSLGYS+ +IL IP+ ISV  NKKTF L SANFG LQNFATTIR +RFPD YKG G+LYD EII CKEGKKT
Sbjct:    1 MTTPVFRLPIGVECTSSSGKVRVSGARGLVIFDSVSNLHRKGNMVIFLPYLTPYYSSIFTQAVLGVILGYTIELKLKGIGYRVREEKGKLIFSLGYSRPIILTIPEAISVKFNKKTFLLRSANFGLLQNFATTIRRFRFPDPYKGGGILYDSEIIVCKEGKKT 163

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BLAST of mRNA_L-elsbetiae_contig12154.1793.1 vs. uniprot
Match: A0A089PAW2_PETFA (Ribosomal protein L6 n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A089PAW2_PETFA)

HSP 1 Score: 258 bits (659), Expect = 4.860e-86
Identity = 123/163 (75.46%), Postives = 143/163 (87.73%), Query Frame = 0

Query:    1 MTTPVYRLPTGVECSSNNGKVRVSGSNGTVVFDSVSSLYRKGNIVIFLPYLTPYYSSIFTQAVQGVVLGYTIELSLKGIGYRVREENKKLIFSLGYSQSVILKIPDNISVNINKKTFSLLSANFGALQNFATTIRSYRFPDSYKGSGVLYDGEIICCKEGKKT 163
            MT PVYRLP GV+CSSNNGKV +SG+ G VVF+SVS+LYRKG++VIFLPYLTPYYSSIF QAVQGV+ GYT+EL+LKGIGYRVREE+ KL+FSLGYS+ VIL IP ++SV  +K++FSL S N   LQNFATTIR YRFPDSYKGSG++YDGEII CKEGKKT
Sbjct:    1 MTVPVYRLPIGVKCSSNNGKVYLSGTKGVVVFNSVSNLYRKGDMVIFLPYLTPYYSSIFRQAVQGVIFGYTVELTLKGIGYRVREESGKLLFSLGYSKPVILDIPKDVSVTFSKQSFSLTSPNLSVLQNFATTIRRYRFPDSYKGSGIIYDGEIIICKEGKKT 163

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BLAST of mRNA_L-elsbetiae_contig12154.1793.1 vs. uniprot
Match: A0A8F0FCE9_9PHAE (Ribosomal protein L6 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0FCE9_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 1.980e-85
Identity = 124/163 (76.07%), Postives = 140/163 (85.89%), Query Frame = 0

Query:    1 MTTPVYRLPTGVECSSNNGKVRVSGSNGTVVFDSVSSLYRKGNIVIFLPYLTPYYSSIFTQAVQGVVLGYTIELSLKGIGYRVREENKKLIFSLGYSQSVILKIPDNISVNINKKTFSLLSANFGALQNFATTIRSYRFPDSYKGSGVLYDGEIICCKEGKKT 163
            MT PV+RLP GV CSSN GKVRVSG  G V FDS+S+LYRKGN+VIFLPYLTPY SSIF QA+ GVVLGYTIEL LKGIGYRVREE+ KLIFSLGYS+ V+L IP ++ V  +K+TFSL+SAN+G LQNFATTIR YRFPDSYKG+GVLY+ EII CKEGKKT
Sbjct:    1 MTLPVFRLPIGVSCSSNKGKVRVSGCCGMVTFDSISNLYRKGNMVIFLPYLTPYESSIFKQAIYGVVLGYTIELRLKGIGYRVREEDNKLIFSLGYSRPVLLNIPKDVEVKFSKRTFSLMSANYGVLQNFATTIRRYRFPDSYKGAGVLYENEIIVCKEGKKT 163

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BLAST of mRNA_L-elsbetiae_contig12154.1793.1 vs. uniprot
Match: A0A1I9LW55_9PHAE (Ribosomal protein L6 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW55_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 1.620e-84
Identity = 125/163 (76.69%), Postives = 139/163 (85.28%), Query Frame = 0

Query:    1 MTTPVYRLPTGVECSSNNGKVRVSGSNGTVVFDSVSSLYRKGNIVIFLPYLTPYYSSIFTQAVQGVVLGYTIELSLKGIGYRVREENKKLIFSLGYSQSVILKIPDNISVNINKKTFSLLSANFGALQNFATTIRSYRFPDSYKGSGVLYDGEIICCKEGKKT 163
            MT PV+R+P GVECSSN GKV VSG  GTV F+SVS+LYRKGN+VIFLPYLTPYYSSIF QA+QGVV GY++ELSLKGIGYRVREE +KL FSLGYS+ VIL IP +IS+  NKK+F L SANFG LQNFATTIR YRFPDSYKG+GVLY  E I CKEGKKT
Sbjct:    1 MTVPVFRIPIGVECSSNKGKVCVSGLKGTVSFNSVSNLYRKGNLVIFLPYLTPYYSSIFKQAIQGVVFGYSLELSLKGIGYRVREEKRKLFFSLGYSKPVILDIPKDISIKFNKKSFLLNSANFGVLQNFATTIRRYRFPDSYKGAGVLYAEEKIVCKEGKKT 163

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BLAST of mRNA_L-elsbetiae_contig12154.1793.1 vs. uniprot
Match: W5RGA8_COSCS (Ribosomal protein L6 n=1 Tax=Costaria costata TaxID=2872 RepID=W5RGA8_COSCS)

HSP 1 Score: 254 bits (649), Expect = 1.620e-84
Identity = 120/163 (73.62%), Postives = 144/163 (88.34%), Query Frame = 0

Query:    1 MTTPVYRLPTGVECSSNNGKVRVSGSNGTVVFDSVSSLYRKGNIVIFLPYLTPYYSSIFTQAVQGVVLGYTIELSLKGIGYRVREENKKLIFSLGYSQSVILKIPDNISVNINKKTFSLLSANFGALQNFATTIRSYRFPDSYKGSGVLYDGEIICCKEGKKT 163
            MT PV+RLP GV+CSSN GKV+VSGS G V+F+SVS+L+RKGN+V+FLPYLT Y SS+FTQA+ GVVLGYTIEL LKGIGYRVREE KKL FSLGYS++V++ IP+ +SV + KKTFSL+SANFG LQNFA++IR YR+PDSYKG+GVLY+ EII CKEGKKT
Sbjct:    1 MTIPVFRLPIGVKCSSNKGKVKVSGSKGVVIFESVSNLHRKGNMVLFLPYLTSYESSLFTQAIFGVVLGYTIELKLKGIGYRVREEEKKLFFSLGYSKAVVVDIPEAVSVKLGKKTFSLISANFGVLQNFASSIRRYRYPDSYKGAGVLYENEIIMCKEGKKT 163

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BLAST of mRNA_L-elsbetiae_contig12154.1793.1 vs. uniprot
Match: A0A516ICG7_9PHAE (Ribosomal protein L6 n=3 Tax=Lessonia TaxID=105411 RepID=A0A516ICG7_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 2.300e-84
Identity = 120/163 (73.62%), Postives = 142/163 (87.12%), Query Frame = 0

Query:    1 MTTPVYRLPTGVECSSNNGKVRVSGSNGTVVFDSVSSLYRKGNIVIFLPYLTPYYSSIFTQAVQGVVLGYTIELSLKGIGYRVREENKKLIFSLGYSQSVILKIPDNISVNINKKTFSLLSANFGALQNFATTIRSYRFPDSYKGSGVLYDGEIICCKEGKKT 163
            MTTPV+RLP GV+CSSNNGKV VSG  G V+FDSVS+LYRKGN+V+FLPYLTPY SS+FTQA+ GVVLGYTIEL L+GIGYRV++E KKLIF LGYS+ VI+ IP+ +SVN+ KKTF L+SAN G LQNFA++IR YR+PDSYKG+GVLY+ E I CKEGKKT
Sbjct:    1 MTTPVFRLPIGVKCSSNNGKVIVSGLKGVVIFDSVSNLYRKGNMVLFLPYLTPYESSLFTQAILGVVLGYTIELKLQGIGYRVQQEKKKLIFFLGYSKPVIINIPEEVSVNLGKKTFLLISANLGVLQNFASSIRKYRYPDSYKGAGVLYENETIVCKEGKKT 163

[Close]

BLAST of mRNA_L-elsbetiae_contig12154.1793.1 vs. uniprot
Match: A0A8F0FEG7_9PHAE (Ribosomal protein L6 n=1 Tax=Postelsia palmaeformis TaxID=105414 RepID=A0A8F0FEG7_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 4.650e-84
Identity = 122/163 (74.85%), Postives = 141/163 (86.50%), Query Frame = 0

Query:    1 MTTPVYRLPTGVECSSNNGKVRVSGSNGTVVFDSVSSLYRKGNIVIFLPYLTPYYSSIFTQAVQGVVLGYTIELSLKGIGYRVREENKKLIFSLGYSQSVILKIPDNISVNINKKTFSLLSANFGALQNFATTIRSYRFPDSYKGSGVLYDGEIICCKEGKKT 163
            MT PV+RLP GV+CSSNNGK+ VSGS G V+F SVS+LYRKGN+V+FLPYLT Y SS+FTQA+ GVVLGYTIEL  KGIGYRVR++ KKLIFSLGYS+ VIL IPD+ISVN+ KKTF L+SAN G LQNFA+ IR YR+PDSYKG+GVLY+ EII CKEGKKT
Sbjct:    1 MTIPVFRLPIGVKCSSNNGKISVSGSKGVVIFYSVSNLYRKGNMVLFLPYLTSYESSLFTQAIFGVVLGYTIELKFKGIGYRVRKDGKKLIFSLGYSKPVILAIPDDISVNLGKKTFLLISANLGVLQNFASCIRRYRYPDSYKGAGVLYENEIIVCKEGKKT 163

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig12154.1793.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig12154.1793.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A3G5FPP9_9PHAE	1.800e-97	87.12	Ribosomal protein L6 n=1 Tax=Cladosiphon okamuranu...	[more]
E6ZEQ4_ECTSI	1.070e-89	80.37	Ribosomal protein L6 n=2 Tax=Ectocarpus siliculosu...	[more]
A0A0U1XDA2_9PHAE	4.360e-89	77.30	Ribosomal protein L6 n=1 Tax=Colpomenia peregrina ...	[more]
Q2TUH0_9PHAE	3.580e-88	78.53	Ribosomal protein L6 n=2 Tax=Desmarestia TaxID=313...	[more]
A0A089PAW2_PETFA	4.860e-86	75.46	Ribosomal protein L6 n=1 Tax=Petalonia fascia TaxI...	[more]
A0A8F0FCE9_9PHAE	1.980e-85	76.07	Ribosomal protein L6 n=1 Tax=Chorda asiatica TaxID...	[more]
A0A1I9LW55_9PHAE	1.620e-84	76.69	Ribosomal protein L6 n=1 Tax=Pleurocladia lacustri...	[more]
W5RGA8_COSCS	1.620e-84	73.62	Ribosomal protein L6 n=1 Tax=Costaria costata TaxI...	[more]
A0A516ICG7_9PHAE	2.300e-84	73.62	Ribosomal protein L6 n=3 Tax=Lessonia TaxID=105411...	[more]
A0A8F0FEG7_9PHAE	4.650e-84	74.85	Ribosomal protein L6 n=1 Tax=Postelsia palmaeformi...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019906	Ribosomal protein L6, bacterial-type	PRINTS	PR00059	RIBOSOMALL6	coord: 86..102 score: 34.35 coord: 127..148 score: 44.57 coord: 58..83 score: 37.97
IPR019906	Ribosomal protein L6, bacterial-type	PANTHER	PTHR11655:SF14	54S RIBOSOMAL PROTEIN L6, MITOCHONDRIAL	coord: 57..162
IPR000702	Ribosomal protein L6	PIRSF	PIRSF002162	RPL6p_RPL6a_RPL9e_RPL9o	coord: 2..163 e-value: 1.5E-32 score: 110.4
IPR000702	Ribosomal protein L6	PANTHER	PTHR11655	60S/50S RIBOSOMAL PROTEIN L6/L9	coord: 57..162
IPR036789	Ribosomal protein L6, alpha-beta domain superfamily	GENE3D	3.90.930.12		coord: 70..163 e-value: 1.1E-23 score: 85.1
IPR036789	Ribosomal protein L6, alpha-beta domain superfamily	SUPERFAMILY	56053	Ribosomal protein L6	coord: 70..162
IPR020040	Ribosomal protein L6, alpha-beta domain	PFAM	PF00347	Ribosomal_L6	coord: 78..150 e-value: 7.5E-8 score: 32.9

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig12154	contig	L-elsbetiae_contig12154:3592..4083 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig12154.1793.1	mRNA_L-elsbetiae_contig12154.1793.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig12154 3592..4451 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig12154.1793.1 ID=prot_L-elsbetiae_contig12154.1793.1|Name=mRNA_L-elsbetiae_contig12154.1793.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=164bp
MTTPVYRLPTGVECSSNNGKVRVSGSNGTVVFDSVSSLYRKGNIVIFLPY
LTPYYSSIFTQAVQGVVLGYTIELSLKGIGYRVREENKKLIFSLGYSQSV
ILKIPDNISVNINKKTFSLLSANFGALQNFATTIRSYRFPDSYKGSGVLY
DGEIICCKEGKKT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019906	Ribosomal_L6_bac-type
IPR000702	Ribosomal_L6
IPR036789	Ribosomal_L6_a/b-dom_sf
IPR020040	Ribosomal_L6_a/b-dom