prot_L-elsbetiae_contig11963.1675.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11963.1675.1
Unique Nameprot_L-elsbetiae_contig11963.1675.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length296
Homology
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BLAST of mRNA_L-elsbetiae_contig11963.1675.1 vs. uniprot
Match: D7G2Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z9_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 3.550e-101
Identity = 165/290 (56.90%), Postives = 207/290 (71.38%), Query Frame = 0 
Query:   10 ALPYGVAPSHSGPPXXXVVHNEQAESAGAGGLFVQALGMLGLLEVWMFIVYVNEGIGGFTFTDFERIILGTMMGFELLGRLPGFIAVCLMCNTNHSSGLDSPENLKTITRDQLHNVVYPRSPPRSSRRRDFAALAWYSLLFTVIPVLLLLSFYPVWGATVDEAVTFDEALWIRVVPSVLAVLAIVEAAAGFLYMESNRSSYVLTVLYAHAKIISLLVLVCGANRLLLGEGGDGGG----VAILGIPLAFLQAVKIASAFAAAINYLRGRPDEQLPTLRSAMT-CHLCLTH 294
            A P GV    SGPP   VV +     +  GG+  QALG LGLLEVW+FIVYV    G   F  FE +I   +  FE LGR+PG +A+CL+CN  +S+ +D PEN+KTITRDQLHN+VYPR PPRS +RRDFAA+A Y +L  V+PV++LLSF+P W +       FDE +WIRVVPSVLAV+A++E+ AG  YM++N+S +VLTV+YAH KI+SL +LVCGANRLLLGE G+ G     V +LGIPLA LQ +K+ASA  AA+NYLRGRPDE+LPTLR  +  C  C  H
Sbjct:   13 AAPAGV--QGSGPPP--VVTDSNGTGSKDGGMLAQALGTLGLLEVWVFIVYVFGNSG---FEHFEGVIFDALAAFEFLGRMPGMLALCLVCN--NSTSIDHPENIKTITRDQLHNMVYPRDPPRSRKRRDFAAMALYGMLIAVVPVVILLSFFPTWTSL------FDEPVWIRVVPSVLAVVAVIESMAGSAYMDANQSCFVLTVMYAHTKIMSLFLLVCGANRLLLGEEGEDGXXXXXVMVLGIPLAILQLIKVASAGVAAVNYLRGRPDERLPTLRGTLRLCAFCPIH 287
[Close]
BLAST of mRNA_L-elsbetiae_contig11963.1675.1 vs. uniprot
Match: A0A6H5L4J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J0_9PHAE)

HSP 1 Score: 268 bits (686), Expect = 9.190e-87
Identity = 139/231 (60.17%), Postives = 177/231 (76.62%), Query Frame = 0 
Query:   67 GFTFTDFE-RIILGTMMGFELLGRLPGFIAVCLMCNTNHSSGLDSPENLKTITRDQLHNVVYPRSPPRSSRRRDFAALAWYSLLFTVIPVLLLLSFYPVWGATVDEAVTFDEALWIRVVPSVLAVLAIVEAAAGFLYMESNRSSYVLTVLYAHAKIISLLVLVCGANRLLLGEGG-DGGG---VAILGIPLAFLQAVKIASAFAAAINYLRGRPDEQLPTLRSAMT-CHLC 291
            G TF D   R+I   +  FE LGR+PG +A+CL+CN  +S+ +D PEN+KTITRDQLHN+VYPR PPRS +RRDFAA+A Y +L  V+PV++LLSF+P W +       FDE +WIRVVPSVLAV+A++E+ AG  Y+++N+S +VLTV+YAH KI+SL +LVCGANRLLLGE G DGGG   V +LGIPLA LQ +K+ASA  AA+NYLRGRPDE+LPTLR  +  C  C
Sbjct:   21 GQTFPDHAYRVIFSMLAAFEFLGRMPGMLALCLVCN--NSTSIDHPENIKTITRDQLHNMVYPRDPPRSRKRRDFAAMALYGMLAAVVPVVILLSFFPTWTSL------FDEPVWIRVVPSVLAVVAVIESMAGSAYIDANQSCFVLTVMYAHTKIMSLFLLVCGANRLLLGEEGEDGGGDKGVMVLGIPLAILQLIKVASAGVAAVNYLRGRPDERLPTLRGTLRLCTFC 243
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11963.1675.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2Z9_ECTSI3.550e-10156.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4J0_9PHAE9.190e-8760.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 247..271
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 214..235
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..167
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 236..246
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 168..178
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 272..295
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..202
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..142
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 203..213
NoneNo IPR availableTMHMMTMhelixcoord: 246..268
NoneNo IPR availableTMHMMTMhelixcoord: 209..231
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
NoneNo IPR availableTMHMMTMhelixcoord: 76..98
NoneNo IPR availableTMHMMTMhelixcoord: 180..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11963contigL-elsbetiae_contig11963:836..5765 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11963.1675.1mRNA_L-elsbetiae_contig11963.1675.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11963 644..5893 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11963.1675.1 ID=prot_L-elsbetiae_contig11963.1675.1|Name=mRNA_L-elsbetiae_contig11963.1675.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=296bp
MAPTSVSTEALPYGVAPSHSGPPPPPVVHNEQAESAGAGGLFVQALGMLG
LLEVWMFIVYVNEGIGGFTFTDFERIILGTMMGFELLGRLPGFIAVCLMC
NTNHSSGLDSPENLKTITRDQLHNVVYPRSPPRSSRRRDFAALAWYSLLF
TVIPVLLLLSFYPVWGATVDEAVTFDEALWIRVVPSVLAVLAIVEAAAGF
LYMESNRSSYVLTVLYAHAKIISLLVLVCGANRLLLGEGGDGGGVAILGI
PLAFLQAVKIASAFAAAINYLRGRPDEQLPTLRSAMTCHLCLTHA*
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