prot_L-elsbetiae_contig11956.1667.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11956.1667.1
Unique Nameprot_L-elsbetiae_contig11956.1667.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length551
Homology
BLAST of mRNA_L-elsbetiae_contig11956.1667.1 vs. uniprot
Match: A0A6H5JIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIY6_9PHAE)

HSP 1 Score: 333 bits (855), Expect = 5.530e-105
Identity = 323/570 (56.67%), Postives = 363/570 (63.68%), Query Frame = 0
Query:    1 MPVIERTVPLPKLYVPEARSSPPRS-----RSPRRVPSPLRNAQFRPLAMEYANSLQPTSCKFYNNEDEEEDPSQGEYCALVRTVGYSTVGDKTFMSGKCPNCHRHVKSEKQVCTPNATPPPSPWKQTLNNLQSPXXXXXXXXXXXPKNGDGGGTKTXXXXXXXXXFKGSFFGSNDXXXXXXXXXXXXXXXXXXXXXX----GPPPTR---GLTRSPPRGEKTGS-PGWWSRSKSPGPRADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----AFFGAADDGSSNGSGSGTKPWASPPRARNVAVAVTRIESARSP--RAERGRSPGAAP-RGGGGGGAERSPSPYRSGGVCGSPTPRARSPPASGRSPGXXXRTTRHSPVGGXGGXXXXATRGPRSPGPRSPVRSGSPWQGASFFGSSHNNGGEDMEESVFGGSVVSSASSXXXXXXXXXXXXXXMSPKSRGAHSPGPSGSRSPLRVKVDFIDEQHEAXXXXXXXXXXXXXXXXXXXXXQSKQAKGGGWKSPLRSPFKGLFFGGGSSPKKDGGNSGVSMGTE 550
            MPV+ER +PLPKL++ E  SSP R+     RS RRVPSPLRNA+FRPLAMEYA   QPTSCK++N  D++E+ +Q E+CA VRTVGYSTVG K FMSGKCP+CHR+VKS+ QVCTPNATPP SPWK+TLNNLQSP           PK+G G     XXXXXXXXXFKGSFFGSN+                XXX       GP P     GLTRSPPRG + GS P  W+RS+SP PR + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    AFF  A+D S+NG              R+ + +V   E  RSP  R  RGR     P RGG GGG+                           RSPG      R+SP GG        TRGPRSPGPRSP+RS  PW+GASFFG   N   E ME S + GS  SS                 ++ KSRGAHSPGP+G RSPLRVKVDF+D+Q   XXXXXXXXXXXXXXXX       KQAKGG WKSPLRSPFKGLFFGG SSPKKD    GV++GTE
Sbjct:    1 MPVMERAMPLPKLHLREG-SSPSRAGDRSPRSQRRVPSPLRNAKFRPLAMEYAEVPQPTSCKYFNGVDDDEEVTQSEFCAHVRTVGYSTVGGKPFMSGKCPHCHRYVKSDNQVCTPNATPPQSPWKKTLNNLQSPLRSPLRTGSS-PKDGSGSXXXXXXXXXXXXXFKGSFFGSNEDDDKKGKAAPTSPKKTXXXAPTAAPIGPAPAPRGVGLTRSPPRGGEAGSQPAPWARSRSPPPRVNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAFFAVANDTSNNGG-------------RSASGSVAARERGRSPSTRGGRGREEECVPFRGGVGGGSXXXXXXXXXXXXA--------------RSPGVG--VARYSPGGGG------MTRGPRSPGPRSPLRS--PWKGASFFGGG-NEDEEGMEPSAYSGSSSSST---------------YVAAKSRGAHSPGPNGPRSPLRVKVDFVDQQEAXXXXXXXXXXXXXXXXX-------KQAKGG-WKSPLRSPFKGLFFGGSSSPKKDTQAGGVTIGTE 507          
BLAST of mRNA_L-elsbetiae_contig11956.1667.1 vs. uniprot
Match: D7FQS9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS9_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 4.730e-63
Identity = 140/235 (59.57%), Postives = 161/235 (68.51%), Query Frame = 0
Query:    1 MPVIERTVPLPKLYVPEARSSPPRS-----RSPRRVPSPLRNAQFRPLAMEYANSLQPTSCKFYNNEDEEEDPSQGEYCALVRTVGYSTVGDKTFMSGKCPNCHRHVKSEKQVCTPNATPPPSPWKQTLNNLQSPXXXXXXXXXXXPKNGDGGGTKTXXXXXXXXXFKGSFFGSNDXXXXXXXXXXXXXXXXXXXXXX-GPPPTR---GLTRSPPRGEKTGS-PGWWSRSKSPGP 225
            MPV+ER +PLPKL++ E  SSP R+     RS RRVPSPLRNAQFRPLAMEYA   QP+SCK++N  D++E+ +Q E+CA VRTVGYSTVG K FMSGKCP+CHR+VKS+ QVCTPNATPP SPWK+TLNNLQSP           PK+G G     XXXXXXXXXFKGSFFGSND                       GP P     GLTRSPPRG +TGS P  W+RS+SP P
Sbjct:   50 MPVMERAMPLPKLHLREG-SSPSRAGGRSPRSQRRVPSPLRNAQFRPLAMEYAEVPQPSSCKYFNGADDDEEVTQSEFCAHVRTVGYSTVGGKPFMSGKCPHCHRYVKSDNQVCTPNATPPQSPWKKTLNNLQSPLRSPLRTGSS-PKDGGGSXXXXXXXXXXXXXFKGSFFGSNDDDDQRGKAAPTSPKRTAPTAAAVGPAPAPRGVGLTRSPPRGGETGSQPAPWARSRSPPP 282          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11956.1667.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JIY6_9PHAE5.530e-10556.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQS9_ECTSI4.730e-6359.57Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11956contigL-elsbetiae_contig11956:2602..5162 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11956.1667.1mRNA_L-elsbetiae_contig11956.1667.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11956 2191..5420 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11956.1667.1 ID=prot_L-elsbetiae_contig11956.1667.1|Name=mRNA_L-elsbetiae_contig11956.1667.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=551bp
MPVIERTVPLPKLYVPEARSSPPRSRSPRRVPSPLRNAQFRPLAMEYANS
LQPTSCKFYNNEDEEEDPSQGEYCALVRTVGYSTVGDKTFMSGKCPNCHR
HVKSEKQVCTPNATPPPSPWKQTLNNLQSPLRSPLRSRSRSPKNGDGGGT
KTTLQSPLRSPFKGSFFGSNDDDNTTTATATADNKKAAAGGAVGPPPTRG
LTRSPPRGEKTGSPGWWSRSKSPGPRADSPGPRANSPGPRANSPGPRVNS
PTPRANSPGPRSPVRGGSSPSRGAFFGAADDGSSNGSGSGTKPWASPPRA
RNVAVAVTRIESARSPRAERGRSPGAAPRGGGGGGAERSPSPYRSGGVCG
SPTPRARSPPASGRSPGGGARTTRHSPVGGGGGGGGGATRGPRSPGPRSP
VRSGSPWQGASFFGSSHNNGGEDMEESVFGGSVVSSASSGSGSKYSATAA
AAAMSPKSRGAHSPGPSGSRSPLRVKVDFIDEQHEAEEREREERLAAAAV
ASTSAAAQSKQAKGGGWKSPLRSPFKGLFFGGGSSPKKDGGNSGVSMGTE
*
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