prot_L-elsbetiae_contig11938.1655.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11938.1655.1
Unique Nameprot_L-elsbetiae_contig11938.1655.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length249
Homology
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BLAST of mRNA_L-elsbetiae_contig11938.1655.1 vs. uniprot
Match: D8LPV7_ECTSI (PX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPV7_ECTSI)

HSP 1 Score: 308 bits (790), Expect = 1.440e-102
Identity = 165/246 (67.07%), Postives = 190/246 (77.24%), Query Frame = 0 
Query:    1 MEVFGAEAEGQADGGGSRGGGVTVKVRVGSHDCWVGFRAATRLGRRYYYSCIVDGVVMPELNDTVGDGGDDDGETIPLPGEVCVDSVGAAKNNVGTEFLEFRVITRRGGRRRQS-GSGGNGIGSGSDDGGCHYSVVWRRFSAFRSLHNDVTSLLWGSHLLDCLPPLPGKPPPPKCINPLVNQTGTAFVERRRGVLQAYLRRLLEVPKARASVNLMGFLGLHPVTGSPLPWAASSPSAPRRLEPSEE 245
            + V GAE+     GGGS    VT+KVRVGSHDCWVG+RA+ R GR Y+YSCI+DGVVMPELNDTVGD GDD+G  +PLPGEV +DS+  AK+  GTEFLEFRV+T RG RRR S G             GC+++VVWRRFSAFRSLH+DVT++LWGSHLLD LPPLP K     CINPLVNQ G AF+E RR VLQAYLRRLLEVPKARASVNLMGFLGLHP+TG PLPWAA +PS PR+  P ++
Sbjct:   54 IAVQGAESA-PPPGGGSLKKTVTLKVRVGSHDCWVGYRASARPGR-YFYSCIIDGVVMPELNDTVGDTGDDEG--VPLPGEVFIDSIEPAKDRFGTEFLEFRVVTLRGTRRRDSCGXXXXXXXXXXXXXGCYHAVVWRRFSAFRSLHSDVTAMLWGSHLLDSLPPLPAK-----CINPLVNQMGAAFLESRREVLQAYLRRLLEVPKARASVNLMGFLGLHPITGYPLPWAALAPSTPRQAAPLDD 290
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BLAST of mRNA_L-elsbetiae_contig11938.1655.1 vs. uniprot
Match: A0A6U1LL59_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LL59_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.240e-10
Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = 0 
Query:  131 HYSVVWRRFSAFRSLHNDVTSLLWGSHLLDCLPPLPGKPPPPKCINPLVNQTGTAFVERRRGVLQAYLRRLLEVPKARASVNLMGFLGL 219
            HY VV RRFS F  L N + S  W  HL   LP LP K      I  +++ + T FVE+RR  L+AYL+RL++VP A ++ +L  FLG+
Sbjct:   17 HY-VVTRRFSDFDRLDNHIKSAFWRHHLRSNLPCLPAKK-----IKYVIDHSQTDFVEQRRLDLEAYLKRLVQVPHASSNPDLHQFLGI 99
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11938.1655.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPV7_ECTSI1.440e-10267.07PX domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A6U1LL59_9STRA1.240e-1044.94Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 81..224
e-value: 1.7E-14
score: 55.6
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 131..220
IPR001683Phox homologous domainPFAMPF00787PXcoord: 132..217
e-value: 2.7E-9
score: 37.0
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 79..224
score: 10.988

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11938contigL-elsbetiae_contig11938:268..5696 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11938.1655.1mRNA_L-elsbetiae_contig11938.1655.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11938 226..5749 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11938.1655.1 ID=prot_L-elsbetiae_contig11938.1655.1|Name=mRNA_L-elsbetiae_contig11938.1655.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=249bp
MEVFGAEAEGQADGGGSRGGGVTVKVRVGSHDCWVGFRAATRLGRRYYYS
CIVDGVVMPELNDTVGDGGDDDGETIPLPGEVCVDSVGAAKNNVGTEFLE
FRVITRRGGRRRQSGSGGNGIGSGSDDGGCHYSVVWRRFSAFRSLHNDVT
SLLWGSHLLDCLPPLPGKPPPPKCINPLVNQTGTAFVERRRGVLQAYLRR
LLEVPKARASVNLMGFLGLHPVTGSPLPWAASSPSAPRRLEPSEERWS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036871PX_dom_sf
IPR001683Phox