prot_L-elsbetiae_contig11807.1561.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11807.1561.1
Unique Nameprot_L-elsbetiae_contig11807.1561.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length339
Homology
BLAST of mRNA_L-elsbetiae_contig11807.1561.1 vs. uniprot
Match: A0A6H5LLL6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLL6_9PHAE)

HSP 1 Score: 420 bits (1080), Expect = 1.100e-136
Identity = 232/340 (68.24%), Postives = 252/340 (74.12%), Query Frame = 0
Query:    1 IVDRGDRTEQAEFVEEVQAQNKLSSVTFADDYPVEEHSWVEFPVYGTKYEAIYISPNGALFVPPLQTVVPGGLSAVSPSTEAFFPVLKADWNPSDSRAASSVLVMIEEGQFSVLYEDVFLFKRSATATPSTFSTTVFPDGSLRYRYIRVGDTADWTVGVSGNSFVSPTIRNRHVRQSEFIQMGEDGLPVASVAASQVFPGTST-PPTP----SSAFNASDDADGEPASGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEVALCRAPTLACLGRACGKAGSEVSVLWEGFGCRAAASLNVSFACRIGGLEVPATSLRG 335
            IVDR D  EQAEFV EV+AQNKLSSVTFADDYPVE H+W EFPVYGTKYE +YISPNGALFVPPLQTVVPGGLSAVSPSTEA+FPVLKADWNPSDSRAASSVLV+IEE QFSVLY+DVFLFKRSA+ATPSTFSTTVFPDGSLRYRY+R+GD ADWT GVSGNSFVSPTIRNRHVRQS+FIQM E+GLP A+ A  + F  T T PP+P    S+A N+SD   G+ +S                                                    TEV LCRAPTLACL RACGKAGSEV VLWEG GCRAAASLNV+F+CRIGGLEVPA  L G
Sbjct:   19 IVDRADPVEQAEFVAEVRAQNKLSSVTFADDYPVEFHNWREFPVYGTKYEDVYISPNGALFVPPLQTVVPGGLSAVSPSTEAYFPVLKADWNPSDSRAASSVLVVIEEDQFSVLYQDVFLFKRSASATPSTFSTTVFPDGSLRYRYMRIGDKADWTAGVSGNSFVSPTIRNRHVRQSQFIQMDENGLPSAA-APPEAFSATPTLPPSPGAPVSTASNSSDSTSGDDSS--------------------------EVQQWGEGEAVTIIANGDGAEEEDADTEVTLCRAPTLACLARACGKAGSEVPVLWEGVGCRAAASLNVTFSCRIGGLEVPAVGLGG 331          
BLAST of mRNA_L-elsbetiae_contig11807.1561.1 vs. uniprot
Match: D7FI05_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI05_ECTSI)

HSP 1 Score: 410 bits (1055), Expect = 1.850e-129
Identity = 230/345 (66.67%), Postives = 244/345 (70.72%), Query Frame = 0
Query:    1 IVDRGDRTEQAEFVEEVQAQNKLSSVTFADDYPVEEHSWVEFPVYGTKYEAIYISPNGALFVPPLQTVVPGGLSAVSPSTEAFFPVLKADWNPSDSRAASSVLVMIEEGQFSVLYEDVFLFKRSATATPSTFSTTVFPDGSLRYRYIRVGDTADWTVGVSGNSFVSPTIRNRHVRQSEFIQMGEDGLPVASVAASQVFPGTSTPPTPSSAFNAS----------DDADGEPASGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEVALCRAPTLACLGRACGKAGSEVSVLWEGFGCRAAASLNVSFACRIGGLEVPATSLRG 335
            IVDR D  EQAEFV EV+AQNKLSSVTFADDYPVE H+W EFPVYGTKYE +YISPNGALFVPPLQTVVPGGLSAVSPSTEA+FPVLKADWNPSDSRAASSVLVMIEE QFSVLY+DVFLFKRSA+ATPSTFSTTVFPDGSLRYRY+R+GD ADWT GVSGNSFVSPTIRNRHVRQS+FIQM E+GLP A+ A S+ F  T T                     DDA      GG                                                  TEV LCRAPTLACL RACGKAGSEV VLWEG GCRAAASLNV+F+CRIGGLEVPA SL G
Sbjct:  534 IVDRADPVEQAEFVAEVRAQNKLSSVTFADDYPVEFHNWREFPVYGTKYEDVYISPNGALFVPPLQTVVPGGLSAVSPSTEAYFPVLKADWNPSDSRAASSVLVMIEEDQFSVLYQDVFLFKRSASATPSTFSTTVFPDGSLRYRYMRIGDKADWTAGVSGNSFVSPTIRNRHVRQSQFIQMDENGLPSAA-APSEAFSATPTXXXXXXXXXXXXXXXXXXXXXDDASEVQGEGG-------------------------------GSAVTIIANGDGAEEEDGDTEVTLCRAPTLACLARACGKAGSEVPVLWEGVGCRAAASLNVTFSCRIGGLEVPAVSLEG 846          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11807.1561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LLL6_9PHAE1.100e-13668.24RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FI05_ECTSI1.850e-12966.67RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11807contigL-elsbetiae_contig11807:2351..5116 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11807.1561.1mRNA_L-elsbetiae_contig11807.1561.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11807 2351..5116 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11807.1561.1 ID=prot_L-elsbetiae_contig11807.1561.1|Name=mRNA_L-elsbetiae_contig11807.1561.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=339bp
IVDRGDRTEQAEFVEEVQAQNKLSSVTFADDYPVEEHSWVEFPVYGTKYE
AIYISPNGALFVPPLQTVVPGGLSAVSPSTEAFFPVLKADWNPSDSRAAS
SVLVMIEEGQFSVLYEDVFLFKRSATATPSTFSTTVFPDGSLRYRYIRVG
DTADWTVGVSGNSFVSPTIRNRHVRQSEFIQMGEDGLPVASVAASQVFPG
TSTPPTPSSAFNASDDADGEPASGGPGGGQGGGSGDAVTTTTTAAASDGD
DDDREEEEEEQEGEGVDGGGGGGGGTEVALCRAPTLACLGRACGKAGSEV
SVLWEGFGCRAAASLNVSFACRIGGLEVPATSLRGPSSS
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