prot_L-elsbetiae_contig1167.1444.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1167.1444.1
Unique Nameprot_L-elsbetiae_contig1167.1444.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length632
Homology
BLAST of mRNA_L-elsbetiae_contig1167.1444.1 vs. uniprot
Match: A0A6H5J724_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J724_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 7.590e-38
Identity = 91/183 (49.73%), Postives = 118/183 (64.48%), Query Frame = 0
Query:  337 YLYLHVIGPAPSEEKVPPARKVHLTSRHARPAALETKVEKPGTYTLYVTASIRWSGSGTCADPSATPIRLMEFCVPESLYANQGGNTVCGNCGEALP--PARRIINKDPLGIKGPLPLRLVPQSGLSFLVDLSVQAFTPP-KNPASRLYCKTCISASTSTETKSYVPLTDGDVARKVMRKAAA 516
            +LYL VIGPAP+++KVPPA+ V L +R A+P  L T + KPG YTLYVTAS RW+G G C DPS  PI +  FC+P++L+    G   C  CGE LP  P RR+I KDPLG  GPL LRL+P+SGLSFL DL+V    P  +   S+  C  C++ S     + Y  L++ DV+R +  KA A
Sbjct:  731 HLYLQVIGPAPTQDKVPPAKMVTLGNRDAKPVDLLTTLSKPGRYTLYVTASNRWNGGGVCEDPSEQPIEIKHFCIPDNLFP--AGEACCIGCGEVLPYRPHRRVI-KDPLG-PGPLELRLIPRSGLSFLADLTVHVSIPLLRGKGSK--CSACMTTSA----EDYAALSNEDVSRALALKAVA 903          
BLAST of mRNA_L-elsbetiae_contig1167.1444.1 vs. uniprot
Match: D7FSN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN2_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 2.980e-36
Identity = 91/186 (48.92%), Postives = 117/186 (62.90%), Query Frame = 0
Query:  337 YLYLHVIGPAPSEEKVPPARKVHLTSRHARPAALETKVEKPGTYTLYVTASIRWSGSGTCADPSATPIRLMEFCVPESLYANQGGNTVCGNCGEALP--PARRIINKDPLGIKGPLPLRLVPQSGLSFLVDLSVQAFTPP-KNPASRLYCKTCISASTSTETKSYVPLTDGDVARKVMRKAAASTT 519
            +LYL VIGPAP+++KVPP + V L  R A+P  L T + KPG YTLYVTAS RW+G G C DPS  PI +  F +P++L+    G   C  CGE LP  P RR+I KDPLG  GPL LRL+P+SGLSFL DL+V    P  +   S+  C  C     +T  ++YV L++ DV+R +  KA A  T
Sbjct:  250 HLYLQVIGPAPTQDKVPPGKMVTLGDRDAKPVDLLTTLSKPGRYTLYVTASNRWNGGGVCKDPSEQPIEIKHFFIPDNLFP--AGEARCIGCGEVLPYRPHRRVI-KDPLG-PGPLELRLIPRSGLSFLADLTVHVSIPLLRGKGSK--CSAC----NTTPAENYVALSNEDVSRALALKAVAHGT 425          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1167.1444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J724_9PHAE7.590e-3849.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSN2_ECTSI2.980e-3648.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1167contigL-elsbetiae_contig1167:12288..15520 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1167.1444.1mRNA_L-elsbetiae_contig1167.1444.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1167 12288..15520 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1167.1444.1 ID=prot_L-elsbetiae_contig1167.1444.1|Name=mRNA_L-elsbetiae_contig1167.1444.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=632bp
GTVTAVKDAPPAGGARSVLKGSSGGEPRLAAEAFVAADAGRACEGTGATA
KATEAAESTGAAAGGAGKSMSSNPSVEEARSRAVVSEGLAEVALGSRGDG
PSGVEPAAAAAAAVAAAAPVVPAPAASGTAVSSPSRTASDKTSGGTSVAV
DGGPVEGRADDGVGRTTASDDSRKSAAVPSQPSGQQEGPAPVDGTPVVDG
GASPGGSTVGAATEKETRAAETETETAHSPSKSASSAAATACPGTEKEKT
ETETVAATASPAVAAAESPPGVAPSPTAAAAAGEVAAEAQVPTSPAAVAA
APAAASGPRTPAAATPVPKTGGSSHKKQRSKEKSGTYLYLHVIGPAPSEE
KVPPARKVHLTSRHARPAALETKVEKPGTYTLYVTASIRWSGSGTCADPS
ATPIRLMEFCVPESLYANQGGNTVCGNCGEALPPARRIINKDPLGIKGPL
PLRLVPQSGLSFLVDLSVQAFTPPKNPASRLYCKTCISASTSTETKSYVP
LTDGDVARKVMRKAAASTTADAATTADAAATADAAATADAAATADAAAAD
YASAADAAAAAAAADYAAAAAANAATVAAAVEAKKAATVSIHDALGLTTA
TVSSPAGALRAAVRRAAAAVGAASPMSGTVSS
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