prot_L-elsbetiae_contig1154.1349.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1154.1349.1
Unique Nameprot_L-elsbetiae_contig1154.1349.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length308
Homology
BLAST of mRNA_L-elsbetiae_contig1154.1349.1 vs. uniprot
Match: D8LD09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD09_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 1.610e-99
Identity = 153/232 (65.95%), Postives = 181/232 (78.02%), Query Frame = 0
Query:   73 VAELELSSAVDLVRAHGQPVLEAVRQTGRFLYRGETLSPRDGAEGGESRAVVETPDLLNDDTYESAVAAEYFRVTDAVMEKQFGASARPSNAHIMVSNKEAAAVWGTACSVWPLGDSLDYSWLENCSEWWDPSWERPQGRSSSANGDRETFFWRDESSLRKFLSDGLRVNSGLPEAMSRRGHELLIRSGEFSLRTSSISRGEEVVIRDGFVCIPASQDRAVRLALRVPLERL 304
            V ELEL SA+ LVRAHG+P+L+ VR++   LYRGE LS   G +GG  RAV E PDLL+ +TY SAVAAEYFR  DA+M+K F A ARPSNAHIMVSNKEAAA WGTACS+WPLGDSLDYSWL +C+E WDP WERP  RSS  NG+RE FFWRDE  +R+FL++GLR+NSGL EA+  R HE+L+RSGEFS   S   +G   VI+D FVCIPAS+DRAVR AL +P ER+
Sbjct:    2 VVELELPSALALVRAHGRPLLDIVRRSSGLLYRGEALSLGGGGKGGGPRAVTEKPDLLDAETYGSAVAAEYFRAADAIMDKDFQAPARPSNAHIMVSNKEAAAAWGTACSIWPLGDSLDYSWLHSCAELWDPRWERPGSRSSPPNGNREAFFWRDEDGMRRFLAEGLRINSGLSEAIRGR-HEVLVRSGEFSFG-SEARKG--AVIQDTFVCIPASEDRAVRSALGIPAERI 229          
BLAST of mRNA_L-elsbetiae_contig1154.1349.1 vs. uniprot
Match: A0A835YZG2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZG2_9STRA)

HSP 1 Score: 203 bits (517), Expect = 3.080e-60
Identity = 111/230 (48.26%), Postives = 150/230 (65.22%), Query Frame = 0
Query:   76 LELSSAVDLVRAHGQPVLEAVRQTG-RFLYRGETLSPRDGAEGGESRAV-VETPDLLNDDTYESAVAAEYFRVTDAVMEKQFGASARPSNAHIMVSNKEAAAVWGTACSVWPLGDSLDYSWLENCSEWWDPSWERPQGRSSSANGDRETFFWRDESSLRKFLSDGLRVNSGLPEAMSRRGHELLIRSGEFSLRTSSISRGEEVVIRDGFVCIPASQDRAVRLALRVPLER 303
            L L  AV L+ + GQP+L  V++ G +FLYRGETL    G  G  S A+ V+ PDLL+  TY S  AAEYF   DA++EK+F A ARPS AHI+V+N +AAA WG ACS+WP+G  L+++WLE+  E WD  WE+P G  S  NG+R  FFWR+E +L ++L  G+ V+ GL EA+ R GHE+LI+SG          RG    + + +V +PA  D A+R AL VPL++
Sbjct:   55 LTLQEAVRLILSQGQPILNGVKEAGGQFLYRGETLPAERG--GASSAALRVQPPDLLDTSTYGSKAAAEYFAALDAMLEKEFAAEARPSTAHIVVANAQAAAEWGEACSIWPVGSPLEWTWLEHTFELWDKGWEQPDGGGSLLNGNRGAFFWREEGALHEYLEAGVIVDKGLAEAI-RSGHEILIQSGPLQ---PPYKRG----VANAYVAVPARLDDALRDALGVPLQQ 274          
BLAST of mRNA_L-elsbetiae_contig1154.1349.1 vs. uniprot
Match: A0A6H5KTS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTS9_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 9.050e-59
Identity = 92/139 (66.19%), Postives = 112/139 (80.58%), Query Frame = 0
Query:  167 MVSNKEAAAVWGTACSVWPLGDSLDYSWLENCSEWWDPSWERPQGRSSSANGDRETFFWRDESSLRKFLSDGLRVNSGLPEAMSRRGHELLIRSGEFSLRTSSISRGEEVVIRDGFVCIPASQDRAVRLALRVPLERLR 305
            MVSNKEAAA WGTACS+WPLGDSLDYSWL++C+E WDP WER   RSS  NG+RE FFWRDE  +R+FL++GLR+NSGLPEA+ R GHE+L+RSGEFS  +   + G   V++  FVCIPAS+DRAVR AL +P ER+R
Sbjct:    1 MVSNKEAAATWGTACSIWPLGDSLDYSWLDSCAELWDPRWERLGSRSSPPNGNREAFFWRDEDGMRRFLAEGLRINSGLPEAI-RCGHEVLVRSGEFSFGSEERT-GRAAVVQGAFVCIPASEDRAVRSALGIPAERVR 137          
BLAST of mRNA_L-elsbetiae_contig1154.1349.1 vs. uniprot
Match: A0A8J2SFP8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SFP8_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 8.800e-13
Identity = 52/124 (41.94%), Postives = 66/124 (53.23%), Query Frame = 0
Query:   73 VAELELSSAVDLVRAHGQPV-LEAVRQTGRFLYRGETLSPRDGAEGGESRAVVETP-DLLNDDTYESAVAAEYFRVTDAVMEKQFGASARPSNAHIMVSNKEAAAVWGTACSVWPLGDSLDYSW 194
            V E+ L  AV  +   G P  + AV Q G F+YRG   +         S  +   P DL +  TY SA AA YFR  DA ++K      R   AH+ V+N EAAA WGTA S+WPLG S+ Y+W
Sbjct:   39 VREISLGEAVKAIITDGNPDWVRAVVQAG-FIYRGVAEA---------SPTLRRDPYDLYSPATYNSARAATYFRSLDAALDKIKAPGPRARTAHLAVANAEAAAQWGTAASIWPLG-SISYAW 151          
BLAST of mRNA_L-elsbetiae_contig1154.1349.1 vs. uniprot
Match: A0A7S2QZW8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2QZW8_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 6.890e-11
Identity = 40/103 (38.83%), Postives = 59/103 (57.28%), Query Frame = 0
Query:  101 RFLYRGETLSPRDGAEGGESRAVVETPDLLNDDTYESAVAAEYFRVTD-AVMEKQFGASARPSNAHIMVSNKEAAAVWGTACSVWPLGDSLDYSWLENCSEWW 202
            +FLYRG  + P    E  +     E+ DLLN +TY S  A  +F+  D   M K      +PSN H+ V++  AA+ WGTA SVWPLGD ++++W ++   +W
Sbjct:   22 KFLYRG--IPP---LEASQPTLRSESSDLLNPETYGSKDATLFFKKLDRGEMAKS---PVKPSNGHLAVTSPGAASQWGTAASVWPLGDKVNFAWYQHGGSFW 116          
BLAST of mRNA_L-elsbetiae_contig1154.1349.1 vs. uniprot
Match: A0A7S2Q5H3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q5H3_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 2.050e-7
Identity = 41/107 (38.32%), Postives = 57/107 (53.27%), Query Frame = 0
Query:  102 FLYRGETLSPRDG----AEGGESRAVVETP-DLLNDDTYESAVAAEYFRVTDAVMEKQFGASARPSNAHIMVSNKEAAAVWGTACSVWPLGD-SLDYSWLENCSEWW 202
            FLYRG  LSP        E      + + P DLL+ +TY S  AA YF+  +  M      S RPSN+H+  +    AA WGTA S+WPLG+  + ++W+E    +W
Sbjct:  112 FLYRG--LSPDANKQLVTENSSGLVITDEPFDLLDVETYGSNAAATYFQSLEVQMNAN-RLSIRPSNSHMGSTCPLEAAKWGTAVSIWPLGEHGVQFAWMEGGGLFW 215          
BLAST of mRNA_L-elsbetiae_contig1154.1349.1 vs. uniprot
Match: A0A7S3P3L3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P3L3_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.990e-6
Identity = 40/121 (33.06%), Postives = 59/121 (48.76%), Query Frame = 0
Query:   76 LELSSAVDLV-RAHGQPVLEAVRQTGRFLYRGETLSPRDGAEGGESRAVVETP-DLLNDDTYESAVAAEYFRVTDAVMEKQFGASARPSNAHIMVSNKEAAAVWGTACSVWPLGDSLDYSW 194
            L  S A  L+ R      L AV+++G+FLYRGE++S            ++  P DLL+  TY +    E     + +  K      RPSN HI  + ++ AA WG  CS+ PLG   ++ W
Sbjct:   28 LSFSQAAGLIQRQCPDEFLAAVQKSGKFLYRGESVS---------CPTILNPPYDLLDPVTYGNDT--EVLNFFNCLEHKYRDKPIRPSNGHIGTAKRQDAAFWGPPCSILPLGRPFNFMW 137          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1154.1349.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LD09_ECTSI1.610e-9965.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YZG2_9STRA3.080e-6048.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KTS9_9PHAE9.050e-5966.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J2SFP8_9STRA8.800e-1341.94Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2QZW8_9STRA6.890e-1138.83Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S2Q5H3_9STRA2.050e-738.32Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S3P3L3_9STRA1.990e-633.06Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 22..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..307

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1154contigL-elsbetiae_contig1154:2752..10090 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1154.1349.1mRNA_L-elsbetiae_contig1154.1349.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1154 2752..10342 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1154.1349.1 ID=prot_L-elsbetiae_contig1154.1349.1|Name=mRNA_L-elsbetiae_contig1154.1349.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=308bp
MIHQLAMAHTSISRGTWLTQQCAVALTLPVALPAGPVAAAANGNVIGGAD
VAATHTAFADALSTLPGDGTSGVAELELSSAVDLVRAHGQPVLEAVRQTG
RFLYRGETLSPRDGAEGGESRAVVETPDLLNDDTYESAVAAEYFRVTDAV
MEKQFGASARPSNAHIMVSNKEAAAVWGTACSVWPLGDSLDYSWLENCSE
WWDPSWERPQGRSSSANGDRETFFWRDESSLRKFLSDGLRVNSGLPEAMS
RRGHELLIRSGEFSLRTSSISRGEEVVIRDGFVCIPASQDRAVRLALRVP
LERLRSQ*
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