prot_L-elsbetiae_contig11509.1327.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11509.1327.1
Unique Nameprot_L-elsbetiae_contig11509.1327.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length399
Homology
BLAST of mRNA_L-elsbetiae_contig11509.1327.1 vs. uniprot
Match: A0A6H5KAS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS6_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 1.980e-59
Identity = 179/368 (48.64%), Postives = 209/368 (56.79%), Query Frame = 0
Query:   42 QSNSLRNIFAKRRGSSRPFIGSKSKNXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSXXXXXXXXXXXXXAGAVLKGLGEAGGALMSMRDSEISRLRRAYARSELSREEMKRCLRTLAVQLRDGEDRTGALLADREAVLYDISSKEAEFAKREALLEESKARVAAEAHQKEELLSSLHVENQALQAAVERLRHDFQEERTLRLSREKKTGPAXXXXXXXXXXXXALPSTPARGDDGGGSARLGIMGRRSLKSRNSLPTPAATS----AASGAAAAEHYS-----RTSSRHSSVSSGAGMHNHNARFSPHR----ARSLGGAGAGEAAAEXXXXXXXXXXXXERGESNHGGIGSRHSVPTISM---VETW 393
            +S SLR+ F++RRGSSR  + + +                                             AGAVLKGLGEAGGALMSMRDSEISRLRRAYARSELSREEMKRCLR LAVQLR+GEDRTGAL+ADREA L  +S+KE EFAK+EA+LEE KAR  AE  Q+EEL++SL VEN+ALQAA+ERLR DFQEER+LRL    ++GPA  XXXXXX      PSTP+R         LGI  RR L SR+   T            G  A+ H S      T SRHS + SG+   NH+ R +P R     R  GG+GA  AAA                 S H GIGSRHS    +     ETW
Sbjct: 1037 KSGSLRDTFSRRRGSSRSSLSTSTA--------------------------------------------AGAVLKGLGEAGGALMSMRDSEISRLRRAYARSELSREEMKRCLRALAVQLREGEDRTGALMADREAALCKLSAKEEEFAKKEAVLEEGKARATAEVQQQEELVTSLQVENEALQAALERLRLDFQEERSLRL----QSGPAAAXXXXXXSK--VRPSTPSR---------LGIFRRRGLTSRDGGGTXXXXXXXXXGEEGQPASRHGSVARPPATPSRHSRLLSGSSFLNHHIRSTPGRPGQGGRLAGGSGAIAAAATPGGVGW---------SSVHRGIGSRHSTTAAAAGGGSETW 1336          
BLAST of mRNA_L-elsbetiae_contig11509.1327.1 vs. uniprot
Match: D7FK06_ECTSI (CRAL/TRIO domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK06_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 8.140e-53
Identity = 126/213 (59.15%), Postives = 145/213 (68.08%), Query Frame = 0
Query:   40 PAQSNSLRNIFAKRRGSSRPFIGSKSKNXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSXXXXXXXXXXXXXAGAVLKGLGEAGGALMSMRDSEISRLRRAYARSELSREEMKRCLRTLAVQLRDGEDRTGALLADREAVLYDISSKEAEFAKREALLEESKARVAAEAHQKEELLSSLHVENQALQAAVERLRHDFQEERTLRLSREKKTGPA 252
            P +S SLR+ F+KRRGSSR  +G+ +                                             AGAVLKGLGEAGGALMSMRDSEISRLRRAYARSELSREEMKRCLR LAVQLR+GEDRTGALLADREA L  +++KE EF K+EA+LEE KAR  AE  QKEEL++SL VEN+ALQAA+ERLR DFQEER+LRL    ++GPA
Sbjct:  975 PRKSGSLRDTFSKRRGSSRSSLGTSTA--------------------------------------------AGAVLKGLGEAGGALMSMRDSEISRLRRAYARSELSREEMKRCLRALAVQLREGEDRTGALLADREAALCKLNAKEEEFTKKEAVLEEGKARATAEVQQKEELVTSLQVENEALQAALERLRLDFQEERSLRL----QSGPA 1139          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11509.1327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KAS6_9PHAE1.980e-5948.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK06_ECTSI8.140e-5359.15CRAL/TRIO domain containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 214..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11509contigL-elsbetiae_contig11509:59..5266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11509.1327.1mRNA_L-elsbetiae_contig11509.1327.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11509 59..5266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11509.1327.1 ID=prot_L-elsbetiae_contig11509.1327.1|Name=mRNA_L-elsbetiae_contig11509.1327.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=399bp
PKGKRLRYVLASYSRRNTNSSIQEGEEEEACSPGSAMPPPAQSNSLRNIF
AKRRGSSRPFIGSKSKNNTSSSGGDGNGNGNGGSGSNGSGGGTPLKSTAA
PSLSSSSSAAAGAVLKGLGEAGGALMSMRDSEISRLRRAYARSELSREEM
KRCLRTLAVQLRDGEDRTGALLADREAVLYDISSKEAEFAKREALLEESK
ARVAAEAHQKEELLSSLHVENQALQAAVERLRHDFQEERTLRLSREKKTG
PAAAAAAAAAALQQALPSTPARGDDGGGSARLGIMGRRSLKSRNSLPTPA
ATSAASGAAAAEHYSRTSSRHSSVSSGAGMHNHNARFSPHRARSLGGAGA
GEAAAEAAEASSSSAAAAERGESNHGGIGSRHSVPTISMVETWAAAHEE
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