prot_L-elsbetiae_contig11508.1326.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11508.1326.1
Unique Nameprot_L-elsbetiae_contig11508.1326.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length480
Homology
BLAST of mRNA_L-elsbetiae_contig11508.1326.1 vs. uniprot
Match: D7FHS8_ECTSI (SNF2 helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS8_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 2.210e-53
Identity = 189/531 (35.59%), Postives = 222/531 (41.81%), Query Frame = 0
Query:    1 MGQILDRLIDEERLKAEEAQRKAILNLNASGAVARLILQAQERRKDPV---GEKSGEGAXXXXXXXXXSNSGETPDTLLRDSISSYRRALQMAEDNRTPGPVTGGAEVTGSRTMLPPALKHQWR--PTVGARASRPSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVFMELRKPLVLSWEAELAP---------------------SPPACPEGGRDVGGVIEVATEAVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGSPSGELEEGQELGAGLEGTGGGFDRDGDA-------RPRDPAWARLVFADRKRILRVRVRCWCCCSPT-----GD-------PHGALDPAAGGAHADRSSETRVSASAKAADQSAHDQLKPRSNNDXXXXXXXXXXXXXXTGGI----------KEASAAKVALPGGPEKPVVPGGKAGEGRRXXXXXXGVSVRYAYPRLCALQASSQAGGTFEDVVRFSVEPP 476
            M QILDRLID ERLKAEEAQRKAILNLNASGAVARLILQA+ERR D        +GEG             GET +TLLRDS+SSY+RALQMAEDNRTPGPVTGGAEVTGS TMLPP+ K + +  P     +S+P+A                                 F+ELRKPL LSWE EL P                     + PA P+G   VGG    A +  V                                                                        G   G L E +  GA                      R RDP WARLVFADRKRILR+RVR    C P      GD       P GA D A+ G +    +  +   S +  D +A   +      D              + G+           EA+   +A PGG     V  G+ GE RR             +PR+CALQASSQAG  FEDVVRFS++ P
Sbjct: 1043 MDQILDRLIDAERLKAEEAQRKAILNLNASGAVARLILQAKERRSDAARTADAAAGEG----------EGGGETAETLLRDSVSSYQRALQMAEDNRTPGPVTGGAEVTGSTTMLPPSTKKRLKQHPAGAQPSSKPAADPNPTAAASRHGTTAAT--------------VAFVELRKPLTLSWEVELGPIVGVASAEAGGETAVAVAERETTPATPQGAEAVGGEAVAARKGAVEEDEEGGGPKDTETTAMGER----------------------------------------------------GGERGGLGESEAGGASXXXXXXXXXXXXXXXXSSECRRVRDPTWARLVFADRKRILRIRVRP---CYPDQFAWHGDDSTAAASPAGATDRASPGENGGDPAPNKGRQSTRREDNAADIGMAVSGRQDQGGAATVLQVPNGASNGVFATNGYSGVAAEAAEGVMAKPGG-----VSEGEGGERRRQGTLVW-------HPRVCALQASSQAG-VFEDVVRFSMDAP 1481          
BLAST of mRNA_L-elsbetiae_contig11508.1326.1 vs. uniprot
Match: A0A6H5JYY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYY0_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 2.210e-45
Identity = 249/522 (47.70%), Postives = 277/522 (53.07%), Query Frame = 0
Query:    1 MGQILDRLIDEERLKAEEAQRKAILNLNASGAVARLILQAQERRKDPVGEKSGEGAXXXXXXXXXSNSGETPDTLLRDSISSYRRALQMAEDNRTPGPVTGGAEVTGSRTMLPPALK--HQWRPTVGARASRPSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVFMELRKPLVLSWEAELAP--SPPACPEGGRDVGGVIEVAT------EAVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGSPSGELEEGQELGAGLEGTGGGFDRDGDARPRDPAWARLVFADRKR--------------ILRVRVRCWCCCS------------PTGDPHGALDPAAGGAHADRSSETRVSASAKAADQSAHDQLKPRSNNDXXXXXXXXXXXXXXTGGI----------KEASAAKVALPGGPEKPVVPGGKAGEGRRXXXXXXGVSVRYAYPRLCALQASSQAGGTFEDVVRFSVEPP 476
            M QILDRLID ERLKAEEAQRKAILNLNASGAVARLILQA+ERR    GE  G+G              ET +TLLRDS+SSY+RALQMAEDNRTPGPVTGGAEVTGSRTMLPP+ K  H+ +P     +S+P+A                               A F+ELRKPL LSWE EL P         GG   G V E  T       A    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                         F+     R R P WARLVFADRKR              ILR+RVR    CS                P GA D A  G +    +  +   SA+  D +A          D              + G+           EA+ A +A   G     V  G+ GE RR             +PR+CALQASSQAG  FEDVVRFS++ P
Sbjct:  834 MDQILDRLIDAERLKAEEAQRKAILNLNASGAVARLILQAKERRSAAAGEGQGDG--------------ETAETLLRDSVSSYQRALQMAEDNRTPGPVTGGAEVTGSRTMLPPSTKKRHKQQPAGAQPSSKPAADPAPTAAATRHGATAAT--------------AAFVELRKPLALSWEVELDPIVGGAGAEAGGGIAGAVAERETTPATPQRAEAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFEC---RRVRVPTWARLVFADRKRALPRYVRVLPRSFSILRIRVRP---CSLDKLARHGGGSTVAASPAGAADRAFPGENGGGPAPNKARQSARREDNAADIGTAVSGRQDQGGAAAVLQVPSGASSGVFDTNGLSGDAAEAAEAVMANTRG-----VSEGEGGERRRQGTLVW-------HPRVCALQASSQAG-VFEDVVRFSMDAP 1308          
BLAST of mRNA_L-elsbetiae_contig11508.1326.1 vs. uniprot
Match: A0A7S3QG57_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QG57_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 7.780e-5
Identity = 40/108 (37.04%), Postives = 51/108 (47.22%), Query Frame = 0
Query:    1 MGQILDRLIDEERLKAEEAQRKAILNLNASGAVARLILQAQERRKDPVGEKSGEGAXXXXXXXXXSNSGETPDTLLRDSISSYRRALQMAEDNRTPGPVTGGAEVTGS 108
            M QILDRLID+ +LKAEEAQR  ILN NA   +  L ++ +ER    V E                        LL+ S   Y  A+Q  + N  P  + G A VTG+
Sbjct:  835 MSQILDRLIDDSKLKAEEAQRLYILNTNALACLHGLHIEGKERMGGIVDECD-------------------EIKLLQKSCGEYLNAVQCGDRNAAPAAIVGEAVVTGN 923          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11508.1326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FHS8_ECTSI2.210e-5335.59SNF2 helicase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5JYY0_9PHAE2.210e-4547.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3QG57_9STRA7.780e-537.04Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11508contigL-elsbetiae_contig11508:2648..6075 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11508.1326.1mRNA_L-elsbetiae_contig11508.1326.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11508 2635..6075 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11508.1326.1 ID=prot_L-elsbetiae_contig11508.1326.1|Name=mRNA_L-elsbetiae_contig11508.1326.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=480bp
MGQILDRLIDEERLKAEEAQRKAILNLNASGAVARLILQAQERRKDPVGE
KSGEGAKEGEGEGEQSNSGETPDTLLRDSISSYRRALQMAEDNRTPGPVT
GGAEVTGSRTMLPPALKHQWRPTVGARASRPSASSSHTGAAGAAGAAGAG
AASAPAAAAAAAAAAVFMELRKPLVLSWEAELAPSPPACPEGGRDVGGVI
EVATEAVVTEAAAAAAAVEGEGRAVAGAEREEASMEREGGEGGRRTNGLV
DAHRENGVLGATAAAGAAAVAGAEGRGAAGGSPSGELEEGQELGAGLEGT
GGGFDRDGDARPRDPAWARLVFADRKRILRVRVRCWCCCSPTGDPHGALD
PAAGGAHADRSSETRVSASAKAADQSAHDQLKPRSNNDNGAAAKTAAAAA
AATGGIKEASAAKVALPGGPEKPVVPGGKAGEGRRGGGRRGGVSVRYAYP
RLCALQASSQAGGTFEDVVRFSVEPPPKKT
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