prot_L-elsbetiae_contig1146.1279.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1146.1279.1
Unique Nameprot_L-elsbetiae_contig1146.1279.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1353
Homology
BLAST of mRNA_L-elsbetiae_contig1146.1279.1 vs. uniprot
Match: D7FR03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR03_ECTSI)

HSP 1 Score: 681 bits (1756), Expect = 1.400e-217
Identity = 592/1345 (44.01%), Postives = 728/1345 (54.13%), Query Frame = 0
Query:    1 MLFSLTFKSIGLARVEAKQGRDAYWGEDLRRCWREGSCRAVGSLEELSPALIYQQVAVCRACYEVYRRLDNLRGKSD-RTAGGGDTRASSSTL------LPLPFPAPSKGRQELLASIDATAASGRRAAAAEAGAVALRAEVAEMLKDVDVRTGKLGIEAGIIWRRRLSKSKSSVGAGVSSGISQARLMGKLAQPKQLS---PDGEQRTDPAHAARSARRPSLKRRVKSQGDIPEPGFPL-----LPRRRRTGPASA----SIGRSVEERKAAGAPRRTLP---PGVPR--RSAWPLLHDDGGMDTRQYSGDTEKLHG----GGGGEGGSGMRSTATICAIEAMLEEGGGESYLPANVRDLPEAAAVLGLPRPGLS--DDKQGCASRQE-HPRGTTKKAKGSRHGDDRNNPRRLEN-------QAAESSTNSFDARSENRVAGGNPNDLEPNTN-DGRTGRTAAG-ASTRARRCDGAEERFLHPWQRALEASKRAIKSRAE-EHESALSKEKRRRSDARRAAAASKDCQKARKRVAARLGRLK-QRPRRRRSVKNGDHAEQDKQQLPQSGFGRKS-TPLNTEEHGGGSRGNLDRKVYPCRQTRQWQPGDYGGGSGERDDYLHQMHDVLGWARKTLMALVQRLRDMGVAVDNNLAAAAAATRAPVDSCSAERTAKDWEVVRVANKLHRRLAAFEDESVNFGVECAAAXXXXXXKGPAAADTNSTLPLLQSRCEAACESFENEFGHMIDELIATARTHPSNPN----PPQLSHFEGDDDGGRP-----LIATGPENRQQHATVGTATFGLCPSCSLLPVARRCLDCEGDHGDRSRCSSCFVREHREAPRHLHRFLRISG----GGGVXXXXXXXXXXXXDHREPKQHLGGAQGDDSARAGNSETPGNSSGVGVRCSRCGDLAAARRCRECCVDTCAACHFLAHRSPSRQSHVTEYVGETAVALQEALHSR-----------------------------------SRHRTVEASRVTASEARRSGDREYEGPRGXXXXXXXXXXPATFSKDAAQSLAKVRKTVDAPVVRPR--SQASREWGSLSRGRDDGAVGVVGCSEEEELPDEADSD-GTRYEEGLSHSSGSRGGD-----RVDGPLDN-----NSIYDG---------RDSVGTFGIGGRIQAAGNNGSDSSVRDDQKGRGDHVERRSNVTGDIVRGEGDAVVVPSFNDSLKDGDDRGRLEGRGYRDTDRL-QGGRG--VDGVKYALGVLEEINEXXXXXXXXXXXXXXXXXXXXXXXXXEDTDDEGMMWSPANIAKVGV-------EEEEEPSPPLPPQEA-TPTEVAETVA 1221
            MLF LTFKS+GLAR EAKQG D YWGE LRRCWREG+ R   SLEELSPAL+Y++VAVCRACY+VYRRLD LR +   RTA     R S S+       LPLP    SKGR++ LA IDATA+SGRRAAAAEAGAV LR EV EMLKDVD R GK G+EAGI WRRRLSKSKS+ G  V     Q+RL+ KL++PK+     P  E+R        +ARRP+LKR+VKSQGDIP+           P+RR + P       S+ R+   R    AP R  P     +PR  +SAWP L D+GG  T           G    G G       RS  TICAIEAMLEEGGG+SYLPA  RDLPEA AVLG P+P  S  D  +G  +R++   RG  KK+     G+D   P R  N       ++  ++ ++ +A +EN   G + ND  PNT  +G T +T+ G  S +  R   AEERFLHPWQRALEA KRA+ +R   +HE+AL +E+R R +ARRAAA SKD         ARLGR   +R RR RS K+  H + D++  P    G +S   LN + +   SR   DR+V   R           GG  + DD L Q+ D LGWARKTL AL++RL+D G+A+++   A AAA R       A   AKDWE+VRV NKL RR+AAFEDE ++ GV           K   A +  +     +S+CEAACESFE +F H+IDEL ATA+  PS+P+       ++H+  +  G  P       A+ P +R    T  + +FGLC SCS+LPVARRCLDC+GD  DR RCSSCFVREHR+A R  HRFLRISG    GGG                      G  +G  SA  G  +   +SSG G RCSRCGDLAAARRCR+C VD CAACHFLAHRSPS++SHVTE+VGETAV++QEAL SR                                   S   T +ASR   +      D      R             +F K AAQSLA+VR+T+DAP V P   SQ+    GS   G  +   GV G SE+    D    D     E G+  S+    GD     R + P D+      +I +G         RD  G +G GG       NG +     D++G  D VE    +TG    G+G+     S   S+   DD     GR  RDT R   GGRG   D  +   G LE I E            XXXXXXXXXXXX      EGMMWSP NIAKV V       EE E  SPP   + A TP E+ +  A
Sbjct:    1 MLFPLTFKSVGLARAEAKQGLDVYWGEALRRCWREGNGRGARSLEELSPALVYREVAVCRACYDVYRRLDKLRERGGGRTADAAGDRGSCSSXXXXXXXLPLPS---SKGRRDSLAGIDATASSGRRAAAAEAGAVTLREEVGEMLKDVDARAGKPGVEAGIPWRRRLSKSKSTAGERVD----QSRLVDKLSRPKKQQLHHPAEEERHTLPREDHTARRPTLKRQVKSQGDIPDSAGDAGDRRHHPQRRTSAPVPGGGFPSLTRARRRRLEPAAPVRGAPWQRTALPRGKKSAWPPLDDEGGEGTVASDHHASNPFGRYLEGSGXXXXXXXRSRETICAIEAMLEEGGGDSYLPARARDLPEALAVLGPPKPESSSKDKARGSTARKKLRHRGAGKKS-----GED---PERENNGHGTGGEESHRTTRDALEASAENGSTGRSGNDPGPNTGGEGHTRKTSPGWPSAKPER---AEERFLHPWQRALEADKRAVNARTGGQHEAALLEEQRCRREARRAAAESKDXXXXXXXXXARLGRQHGRRGRRHRSGKSRVHGKGDRKMAPDRPEGSESRAKLNGQGYEVSSR---DREVVLHRC----------GGDEDDDDSLRQLRDALGWARKTLEALMKRLKDRGIAIES---ARAAAARGGGGLGGA---AKDWEIVRVLNKLRRRVAAFEDEGISLGVN----------KATTAEEGVAGAAEARSKCEAACESFEADFCHLIDELTATAKGLPSHPDLQLRSTSITHWASESSGSVPPGPGGAAASDPASR---TTFRSLSFGLCSSCSVLPVARRCLDCDGD--DRDRCSSCFVREHRDADRQRHRFLRISGCGREGGGTV-------------------AGPRRGAASAEKGAVQE--DSSGGGARCSRCGDLAAARRCRDCSVDMCAACHFLAHRSPSKRSHVTEFVGETAVSMQEALQSRNWGAAAGSAAAREISNDGGEVAAKESGASSSSSPFSSPSTPQASRNVGNSGSDRVDAVSREAREGWGRESPVPGEGSFGKGAAQSLAQVRRTIDAPAVPPPGPSQSLGGIGSGLSGATEHFDGVGGESEDVSRDDARPIDVDPSAEVGVGGSTSLTDGDHGVHPRFEPPGDDFVEEEAAIPNGDGSPDEVIHRDGAGHYGGGGW------NGWEEGQGRDERGNVD-VEIPEEITG----GDGEHGPSDSATHSINIKDD-----GRS-RDTLRAGAGGRGEGADMAEDMFGGLEGIKEEEGLEGEETDTSXXXXXXXXXXXX------EGMMWSPVNIAKVVVPDTASDDEEAEIYSPPFTSRAARTPDELDDIPA 1249          
BLAST of mRNA_L-elsbetiae_contig1146.1279.1 vs. uniprot
Match: A0A6H5L541_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L541_9PHAE)

HSP 1 Score: 655 bits (1690), Expect = 6.380e-204
Identity = 591/1378 (42.89%), Postives = 711/1378 (51.60%), Query Frame = 0
Query:    1 MLFSLTFKSIGLARVEAKQGRDAYWGEDLRRCWREGSCRAVGSLEELSPALIYQQVAVCRACYEVYRRLDNLR----GKSDRTAGGGDTRASSSTLLPLPFPAPSKGRQELLASIDATAASGRRAAAAEAGAVALRAEVAEMLKDVDVRTGKLGIEAGIIWRRRLSKSKSSVGAGVSSGISQARLMGKLAQPKQLS---PDGEQRTDPAHAARSARRPSLKRRVKSQGDIPEP-----------------------GFPLLPR--RRRTGPASASIGRSVEERKAAGAPRRTLPPGVPRRSAWPLLHDDGGMDTRQYSGDTEKLHGGGGGEGGSGM----------RSTATICAIEAMLEEGGGESYLPANVRDLPEAAAVLGLPRPGLSDD---KQGCASRQEHPRGTTKKAKGSRHGDDRNNPRRLENQAAESST-NSFDARSENRVAGGNPNDLEPNTN-DGRTGRTAAG-ASTRARRCDGAEERFLHPWQRALEASKRAIKSRAE-EHESALSKEKRRRSDARRAAAASKDCQKARKRVAARLGRLKQRPRRRRSVKNGDHAEQDKQQLPQSGFGRKSTPLNTEEHGGGSRGNLDRKVYPCRQTRQWQPGDYGGGSG----ERDDYLHQMHDVLGWARKTLMALVQRLRDMGVAVDNNLAAAAAATRAPVDSCSAERTAKDWEVVRVANKLHRRLAAFEDESVNFGVECAAAXXXXXXKGPAAADTNSTLPLLQSRCEAACESFENEFGHMIDELIATARTHPSNPN----PPQLSHFEGDDDGGR---PLIATGPENRQQHATVGTATFGLCPSCSLLPVARRCLDCEGDHGDRSRCSSCFVREHREAPRHLHRFLRISGGGGVXXXXXXXXXXXXDHREPKQHLGGAQGDDSARAGNSETPGNSSGVGVRCSRCGDLAAARRCRECCVDTCAACHFLAHRSPSRQSHVTEYVGETAVALQEALHSRSRHRTVEASRVTASEARRSGDREYEGPRGXXXXXXXXXXPAT-------------------------------------FSKDAAQSLAKVRKTVDAPVVRPRSQASREWGSLS-----RGRDDGAVGVV------GCSEEEELP-DEADSDG----TRYEEGLSHSSGSRGGDRV----------DGPLDNNSIYDGRDSVGTFGIGGRIQAAGNNGSDSSVRDDQKGRGDHVERRSNVTG-DIVRGEGDAVVVPSFNDSLKDGDDRGRLE-GRGYRDTDRLQGGRGVDGVKYALGVLEEINEXXXXXXXXXXXXXXXXXXXXXXXXXEDTDDEGMMWSPANIAKVGV-------EEEEEPSPPLPPQEA-TPTEVAETVAGT-GEACGAESDRSRLSLEGGTPK 1244
            MLFSLTFKS+GLAR EAKQG D YWGE LRRCWREG+ R    LE+LSPAL+Y++VAVCRACY+VYRRLD LR    G++  +AG   +  SSS+ LPLP P   KGR++ LA IDATA  GRRAAAAEA A  LR EV EMLKDVD R GK G+EAGI WRRRLSKSKS+ G  V     Q+RL+ KL+QPK+     P  E+R    H   +  RP+LKR+VKS GDIP+                        G P LPR  RRR  PA+A  G + +        R  LP G  R+SAWP LHD+ G  T            G   EG SG           RS  TICAIEAMLEEGGG+SYLPA  RDLPEA AVLG P+P  S +   K G A R     G  KK+ G+   + +NN      + ++ +T N+ +A +EN   G + ND  PN   +G T +T  G  S +  R   AEERFLHPWQRALEASKRA+ +R   +HE+AL +E+R R +ARRAAA SK          ARLGR     RRRR             ++          P  +E     +R  L+ + Y        + GD G  S     + DDYL Q+ D LGWARKTL ALV+RL+D G+AV+   AAA +              AKDWE+VRV NKL RR+AAFEDE ++  V           K  AA +  +     +S+CEAACESFE +F H+IDEL A A+  PS+P+       ++H   +  G     P  A  P+   +  T G+ +FGLCPSCS+LPVARRCLDC+GD  DR RCSSCFVREHR+A R  HRFLRISG G                R      G  Q D             SSG GVRCSRCGDLAAARRCR+C VD CAACHFLAHRSPSR+SHVTE+VGE AV++QEALH  SR+R   A    A  +R  G        G          P+T                                     F K AAQSLA VR+T+DAP V P   +    G+ S      G  DG  G        G    +E P  E D  G    T  ++G+ H S    GD            DG  D   I+  RD  G +G GGR +     G +     D+ G GD VE    +TG D   G  D        D   DG  R  L  G G R       G G   V+   G LE I E            XXXXXXXXXXXXX     EGMMWSP NIAKV V       EE E  SPP   + A TP E+    A T  E  G  S ++  + E  TPK
Sbjct:  422 MLFSLTFKSVGLARAEAKQGLDVYWGEALRRCWREGNGRGARGLEKLSPALVYREVAVCRACYDVYRRLDKLRERGGGRTADSAGDRVSSCSSSSSLPLPSP---KGRRDSLAGIDATAFKGRRAAAAEASAATLREEVGEMLKDVDARAGKPGVEAGIPWRRRLSKSKSTAGGRVD----QSRLVNKLSQPKKQQLYHPLEEERHTLPHDDHTTHRPTLKRQVKSHGDIPDSADDAGDRRHHPQRRTSAPVPGGRGLPSLPRARRRRLEPAAAVQGAAWQ--------RTILPRG--RKSAWPPLHDEDGEGTGASGHHANPF--GRSLEGSSGXXXXXXXXXXXRSRETICAIEAMLEEGGGDSYLPARARDLPEALAVLGPPKPESSSEDKAKGGTAHR-----GAGKKSGGNL--ERKNNGHDTGGEESDRATRNALEASAENGSTGRSGNDAGPNAGGEGHTRKTPPGWPSAKPAR---AEERFLHPWQRALEASKRAVNARTGGQHEAALLEEQRCRREARRAAAESKXXXXXXXXXXARLGRQHGHRRRRRXXXXXXXXXXXXXKMAPD------RPERSE-----NRAELNGQGYGVSS----RDGDVGFHSRCCDEDDDDYLRQLRDALGWARKTLEALVKRLKDRGIAVEGARAAAESG------GGGLGGAAKDWEIVRVLNKLRRRVAAFEDEGISLDVN----------KATAAEEGLAGAAEARSKCEAACESFEADFCHLIDELTAMAKGLPSHPDLQLRSTSVTHRALEASGNAHPGPGGAAAPD-APRRTTFGSLSFGLCPSCSVLPVARRCLDCDGD--DRDRCSSCFVREHRDADRQRHRFLRISGCG----REGAGTVAAPPRRAASVEKGAVQED-------------SSGGGVRCSRCGDLAAARRCRDCRVDMCAACHFLAHRSPSRRSHVTEFVGEAAVSMQEALH--SRNRGTAAGSAAARGSRDDGGEVAARESGASCSPSPCSSPSTPQVFRTVGDSGSDRVVTVSREALEGREGETPVPGEGSFGKGAAQSLALVRRTIDAPAVPPPGPSQSLGGTGSGFCGSTGHFDGVGGESAHASRDGARPVDEDPLAEVDVGGSTSLTDGDDGV-HPSFEPPGDNFAEEEAGIPNGDGSPDE-VIH--RDGAGHYG-GGRWK-----GWEEGQGRDECGNGD-VEIPEEITGGDGEHGPSDTTT--HSRDIKGDGRSRDILRAGAGRR-------GEGAGMVEDMFGNLEVIKEEEGLEGEETDTSXXXXXXXXXXXXXX----EGMMWSPVNIAKVVVPDTASDGEEAEIYSPPFTSRAARTPDELHGIPATTMEEGEGRRSSQAAQTREATTPK 1693          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1146.1279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR03_ECTSI1.400e-21744.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L541_9PHAE6.380e-20442.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1146..1166
NoneNo IPR availableCOILSCoilCoilcoord: 453..480
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..1352
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1146contigL-elsbetiae_contig1146:7298..12580 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1146.1279.1mRNA_L-elsbetiae_contig1146.1279.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1146 7298..13467 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1146.1279.1 ID=prot_L-elsbetiae_contig1146.1279.1|Name=mRNA_L-elsbetiae_contig1146.1279.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1353bp
MLFSLTFKSIGLARVEAKQGRDAYWGEDLRRCWREGSCRAVGSLEELSPA
LIYQQVAVCRACYEVYRRLDNLRGKSDRTAGGGDTRASSSTLLPLPFPAP
SKGRQELLASIDATAASGRRAAAAEAGAVALRAEVAEMLKDVDVRTGKLG
IEAGIIWRRRLSKSKSSVGAGVSSGISQARLMGKLAQPKQLSPDGEQRTD
PAHAARSARRPSLKRRVKSQGDIPEPGFPLLPRRRRTGPASASIGRSVEE
RKAAGAPRRTLPPGVPRRSAWPLLHDDGGMDTRQYSGDTEKLHGGGGGEG
GSGMRSTATICAIEAMLEEGGGESYLPANVRDLPEAAAVLGLPRPGLSDD
KQGCASRQEHPRGTTKKAKGSRHGDDRNNPRRLENQAAESSTNSFDARSE
NRVAGGNPNDLEPNTNDGRTGRTAAGASTRARRCDGAEERFLHPWQRALE
ASKRAIKSRAEEHESALSKEKRRRSDARRAAAASKDCQKARKRVAARLGR
LKQRPRRRRSVKNGDHAEQDKQQLPQSGFGRKSTPLNTEEHGGGSRGNLD
RKVYPCRQTRQWQPGDYGGGSGERDDYLHQMHDVLGWARKTLMALVQRLR
DMGVAVDNNLAAAAAATRAPVDSCSAERTAKDWEVVRVANKLHRRLAAFE
DESVNFGVECAAAAAAAAAKGPAAADTNSTLPLLQSRCEAACESFENEFG
HMIDELIATARTHPSNPNPPQLSHFEGDDDGGRPLIATGPENRQQHATVG
TATFGLCPSCSLLPVARRCLDCEGDHGDRSRCSSCFVREHREAPRHLHRF
LRISGGGGVGGCGGDGSGDGGDHREPKQHLGGAQGDDSARAGNSETPGNS
SGVGVRCSRCGDLAAARRCRECCVDTCAACHFLAHRSPSRQSHVTEYVGE
TAVALQEALHSRSRHRTVEASRVTASEARRSGDREYEGPRGEGGAGEGTL
GPATFSKDAAQSLAKVRKTVDAPVVRPRSQASREWGSLSRGRDDGAVGVV
GCSEEEELPDEADSDGTRYEEGLSHSSGSRGGDRVDGPLDNNSIYDGRDS
VGTFGIGGRIQAAGNNGSDSSVRDDQKGRGDHVERRSNVTGDIVRGEGDA
VVVPSFNDSLKDGDDRGRLEGRGYRDTDRLQGGRGVDGVKYALGVLEEIN
EEEEEGEDEEDDEETSAGSSIYSSSREDTDDEGMMWSPANIAKVGVEEEE
EPSPPLPPQEATPTEVAETVAGTGEACGAESDRSRLSLEGGTPKRGVANA
ERVEETGDASGDTNHNHCLERREGRQDHALVQLASPATLETITEGVVAKA
VNEADGSLPVPFQDAASKSETEERDGVETLNGHIETNGKHADSSGIYETA
EE*
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