prot_L-elsbetiae_contig1145.1274.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1145.1274.1
Unique Nameprot_L-elsbetiae_contig1145.1274.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length122
Homology
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BLAST of mRNA_L-elsbetiae_contig1145.1274.1 vs. uniprot
Match: D8LB77_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB77_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 2.900e-42
Identity = 83/125 (66.40%), Postives = 94/125 (75.20%), Query Frame = 0 
Query:    1 VSVAIPPTTFDRTKRVVDRHSQTMLMNGVSVERADLAPTPGLVMHGSGDDPPALWRLYARAPYVIQNGLACDIVVWASQPEAQDAGASGVDAGLGAPG----GAAGASPPRADAMKRRLRLNSFG 121
            VSV I P TFDR KRVV+RHSQ ML+NGVSVERADLAPTPGLVMHGSGDD PALWRLY RAPYV+QNGLACD+VVWASQP A++  A+ +D  L +PG    G  G S     ++K RL L   G
Sbjct: 1292 VSVEISPNTFDRNKRVVERHSQGMLVNGVSVERADLAPTPGLVMHGSGDDAPALWRLYTRAPYVVQNGLACDVVVWASQPLAEEGNAT-LDTVLESPGPASSGGGGLSASAGRSLKGRLSLKKLG 1415
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1145.1274.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB77_ECTSI2.900e-4266.40SHR-BD domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1145contigL-elsbetiae_contig1145:26798..27383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1145.1274.1mRNA_L-elsbetiae_contig1145.1274.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1145 26798..27383 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1145.1274.1 ID=prot_L-elsbetiae_contig1145.1274.1|Name=mRNA_L-elsbetiae_contig1145.1274.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp
VSVAIPPTTFDRTKRVVDRHSQTMLMNGVSVERADLAPTPGLVMHGSGDD
PPALWRLYARAPYVIQNGLACDIVVWASQPEAQDAGASGVDAGLGAPGGA
AGASPPRADAMKRRLRLNSFG*
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