prot_L-elsbetiae_contig11043.942.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11043.942.1
Unique Nameprot_L-elsbetiae_contig11043.942.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length186
Homology
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BLAST of mRNA_L-elsbetiae_contig11043.942.1 vs. uniprot
Match: D7G239_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G239_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 8.170e-28
Identity = 97/165 (58.79%), Postives = 111/165 (67.27%), Query Frame = 0 
Query:    6 APTGSKGRRASSLERPTVSSSSQERPPSAVGATVRRG-RKRLSLEKDGTAATAKPRSSS---VGKRSSLSRRRG------GAEDDRGEEELREIIDLDAAAPSQDEIRLMIDRIRRESAGGPVVG--GDLVASSG-KFEHEAAPASGSSITSKLLRSARDVGRQQ 157
            AP+  +G R   ++RPT SSS QERP  +VGA  RR  RKRLS+E++G     KPRSSS   VG+R+SL  RR               + LR I DLDA APSQ+EIR+MIDRIRRESA   VVG  G  V S G +FEHEAAPASGSSITSKLLRSAR VGRQQ
Sbjct:   16 APSSGRGSRTGPVDRPTASSS-QERP--SVGAGTRRSARKRLSVERNGAV---KPRSSSIGSVGRRTSLGGRRAEXXXXXXXXXXXXXDALRGIGDLDAVAPSQEEIRVMIDRIRRESAMEEVVGAGGRAVNSKGQRFEHEAAPASGSSITSKLLRSARGVGRQQ 174
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BLAST of mRNA_L-elsbetiae_contig11043.942.1 vs. uniprot
Match: A0A6H5JPN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN8_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 7.480e-15
Identity = 74/141 (52.48%), Postives = 88/141 (62.41%), Query Frame = 0 
Query:    6 APTGSKGRRASSLERPTVSSSSQERPPSAVGATVRRG-RKRLSLEKDGTAATAKPRSSSVGKRSSLSRRR--GGAEDDRGE-------EELREIIDLDAAAPSQDEIRLMIDRIRRESAGGPVVG--GDLVASSG-KFEHE 133
            AP+  +G R   ++RPT SSS QERP  +VGA  RR  RKRLS+E++G A   KPRSSS+G   S+ RR   GG              + LR I DLDA APSQ+EIR+MIDRIRRESA   VVG  G  V S G +FEHE
Sbjct:   16 APSSGRGSRTGPVDRPTASSS-QERP--SVGAGTRRSARKRLSVERNGAA---KPRSSSIG---SVGRRTILGGRXXXXXXXXXXXXXDALRGIGDLDAVAPSQEEIRVMIDRIRRESAVEEVVGAGGRTVNSKGQRFEHE 147
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11043.942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G239_ECTSI8.170e-2858.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPN8_9PHAE7.480e-1552.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11043contigL-elsbetiae_contig11043:1331..3874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11043.942.1mRNA_L-elsbetiae_contig11043.942.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11043 1331..3874 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11043.942.1 ID=prot_L-elsbetiae_contig11043.942.1|Name=mRNA_L-elsbetiae_contig11043.942.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=186bp
NKAAAAPTGSKGRRASSLERPTVSSSSQERPPSAVGATVRRGRKRLSLEK
DGTAATAKPRSSSVGKRSSLSRRRGGAEDDRGEEELREIIDLDAAAPSQD
EIRLMIDRIRRESAGGPVVGGDLVASSGKFEHEAAPASGSSITSKLLRSA
RDVGRQQASSSPPPPPLPPPMSTGSMATSSSAATEA
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