prot_L-elsbetiae_contig11033.934.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11033.934.1
Unique Nameprot_L-elsbetiae_contig11033.934.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length136
Homology
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BLAST of mRNA_L-elsbetiae_contig11033.934.1 vs. uniprot
Match: A0A6H5JD37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD37_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 6.720e-24
Identity = 67/114 (58.77%), Postives = 75/114 (65.79%), Query Frame = 0 
Query:   29 GMLPFEERHRKADRNRKIYIAVAALAVAAGIMYAVSSTEYSAAAAAANL--DGGARGVGGAWE---GGALRTPVRAAKRAAAAAADYLRRWRSGRVAMLREGG----AYVGTVG 133
            GMLPFEERHRKADRNRKIYIAVAALAVAAG++YAVSS+   +A+AAANL   GG+   G  W+   GGALR P+RAAKRA     DY   WR          G     YVG VG
Sbjct:    2 GMLPFEERHRKADRNRKIYIAVAALAVAAGLVYAVSSSTEQSASAAANLADTGGSGSRGAGWKAGVGGALRAPMRAAKRAXXXXXDY---WRCXXXXXXXXXGEVLGGYVGAVG 112
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BLAST of mRNA_L-elsbetiae_contig11033.934.1 vs. uniprot
Match: D8LB08_ECTSI (Miro-related GTP-ase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB08_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 9.930e-24
Identity = 71/115 (61.74%), Postives = 78/115 (67.83%), Query Frame = 0 
Query:   28 KGMLPFEERHRKADRNRKIYIAVAALAVAAGIMYAVSSTEYSAAAAAANL--DGGARGVGGAWE---GGALRTPVRAAKRAAAAAADYLRRWRSGRVAMLREGG----AYVGTVG 133
            KGMLPFEERHRKADRNRKIYIAVAALAVAAG++YAVSS+   +A+AAANL   GG+   G  WE   GGALR P+RAAKRAA    DY   WR         GG     YVG VG
Sbjct:  748 KGMLPFEERHRKADRNRKIYIAVAALAVAAGLVYAVSSSTEQSASAAANLADTGGSGSRGAGWESGVGGALRAPMRAAKRAAXXXXDY---WRRXXXXXXXGGGEVLGGYVGAVG 859
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BLAST of mRNA_L-elsbetiae_contig11033.934.1 vs. uniprot
Match: D7FZN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZN8_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 5.520e-13
Identity = 38/48 (79.17%), Postives = 42/48 (87.50%), Query Frame = 0 
Query:   30 MLPFEERHRKADRNRKIYIAVAALAVAAGIMYAVSSTEYSAAAAAANL 77
            MLPFEERHRKAD NRKIYIAVAALAVAAG++ AVSS+   +AAAA NL
Sbjct:    1 MLPFEERHRKADNNRKIYIAVAALAVAAGLVCAVSSSTEHSAAAAVNL 48
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11033.934.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JD37_9PHAE6.720e-2458.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB08_ECTSI9.930e-2461.74Miro-related GTP-ase 1 n=1 Tax=Ectocarpus siliculo... [more]
D7FZN8_ECTSI5.520e-1379.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..63
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 64..135
NoneNo IPR availableTMHMMTMhelixcoord: 46..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11033contigL-elsbetiae_contig11033:2302..2709 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11033.934.1mRNA_L-elsbetiae_contig11033.934.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11033 1512..3461 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11033.934.1 ID=prot_L-elsbetiae_contig11033.934.1|Name=mRNA_L-elsbetiae_contig11033.934.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=136bp
MYLPRSLPRGRCANRRNAQTRSASACSKGMLPFEERHRKADRNRKIYIAV
AALAVAAGIMYAVSSTEYSAAAAAANLDGGARGVGGAWEGGALRTPVRAA
KRAAAAAADYLRRWRSGRVAMLREGGAYVGTVGSL*
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