prot_L-elsbetiae_contig1103.933.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1103.933.1
Unique Nameprot_L-elsbetiae_contig1103.933.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length276
Homology
BLAST of mRNA_L-elsbetiae_contig1103.933.1 vs. uniprot
Match: A0A3L6T8N9_PANMI (Succinate dehydrogenase n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6T8N9_PANMI)

HSP 1 Score: 83.6 bits (205), Expect = 6.560e-15
Identity = 60/118 (50.85%), Postives = 71/118 (60.17%), Query Frame = 0
Query:   99 LLRAVQEHRAVAEDEDR---ERPGRRAPAVHPGPQETRRYVRVHSVRLLQHVVPVVLVERRQVPRPRGPHAGLPLDRRLARRLHQGASGGPRRCL-QAIPVSHDHELHQDVPEAPQPR 212
            LL AVQ   AVA+D++     R   RAPAV    +   R VRVH VR+LQH +PV+LVE   VPRPR   A LPL  R  RRL  GA  G    L QA+ V  D ELH+DVP+ P+PR
Sbjct:  161 LLPAVQVRGAVAQDQEAAAGRRRAARAPAVAGAAEGAGRAVRVHPVRVLQHGLPVLLVELGGVPRPRRAAARLPLGLRQPRRLRSGAGAGAVGGLGQAVRVQDDQELHRDVPQEPRPR 278          
BLAST of mRNA_L-elsbetiae_contig1103.933.1 vs. uniprot
Match: A0A8H5BRN4_9AGAR (Succinate dehydrogenase (quinone) n=1 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H5BRN4_9AGAR)

HSP 1 Score: 80.5 bits (197), Expect = 3.730e-14
Identity = 48/90 (53.33%), Postives = 58/90 (64.44%), Query Frame = 0
Query:  122 APAVHPGPQETRRYVRVHSVRLLQHVVPVVLVERRQVPRPRGPHAGLPLDRRLARRLHQGASGGPRRCLQAIPVSHDHELHQDVPEAPQP 211
            AP V  GPQE RR +RVH +R+L  VVPVVLVE  +VPRPR PHAG+PLDRRLAR    GA G      + + V +D +L   VP+   P
Sbjct:  158 APPVARGPQEARRALRVHPLRVLLDVVPVVLVEPGRVPRPRRPHAGVPLDRRLARHPRPGAQGEDAERYEHVSVPYDLQLLAYVPKGLNP 247          
BLAST of mRNA_L-elsbetiae_contig1103.933.1 vs. uniprot
Match: A0A7J8A1C6_MYOMY (Succinate dehydrogenase complex iron sulfur subunit B n=1 Tax=Myotis myotis TaxID=51298 RepID=A0A7J8A1C6_MYOMY)

HSP 1 Score: 70.9 bits (172), Expect = 2.840e-11
Identity = 39/78 (50.00%), Postives = 52/78 (66.67%), Query Frame = 0
Query:  136 VRVHSVRLLQHVVPVVLVERRQVPRPRGPHAGLPLDRRLARRLHQGASGGPRRCLQAIPVSHDHELHQDVPEAPQPRQ 213
            VRVH + LLQH +P +LVE RQ+    G HAGL LD RL RR+H+GA G     L ++P+ H HELHQD+ +  + R+
Sbjct:   99 VRVHPLCLLQHQLPQLLVEWRQILGTCGAHAGLSLDDRLQRRVHRGAPGQAAGPLLSLPLPHHHELHQDLSQGAESRE 176          
BLAST of mRNA_L-elsbetiae_contig1103.933.1 vs. uniprot
Match: A0A212LJ26_9HYPH (Uncharacterized protein n=1 Tax=uncultured Pleomorphomonas sp. TaxID=442121 RepID=A0A212LJ26_9HYPH)

HSP 1 Score: 62.4 bits (150), Expect = 1.430e-8
Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = 0
Query:  138 VHSVRLLQHVVPVVLVERRQVPRPRGPHAGLPLDRRLARRLHQGASGGPRRCLQAIPVSHDHELHQDVPEAPQPRQGDRQHQEEGARALGLAM 230
            +HS+RLL H++P +LVERR + RP  P AGL L  R  RR  +  S   R  +  + + H HEL+ D+P+  Q  +G R+ QE+  RA  L +
Sbjct:    1 MHSLRLLLHLLPELLVERRPLSRPGHPAAGLSLADRQPRRGDRRTSRQSRGPVPPLSLPHHHELYPDLPQGAQSGEGHRRDQEDAGRAADLTL 93          
BLAST of mRNA_L-elsbetiae_contig1103.933.1 vs. uniprot
Match: T1AYL4_9ZZZZ (Succinate dehydrogenase iron-sulfur subunit (Fragment) n=1 Tax=mine drainage metagenome TaxID=410659 RepID=T1AYL4_9ZZZZ)

HSP 1 Score: 62.4 bits (150), Expect = 2.290e-8
Identity = 39/66 (59.09%), Postives = 43/66 (65.15%), Query Frame = 0
Query:  119 GRRAPAVHPGPQETRRYVRVHSVRLLQHVVPVVLVERRQVPRPRGPHAGLPLDRRLARRLHQGASG 184
            G RA A+  GPQ  R  VRVHSVRLLQH+VP +LVERR +P      AGLPLDR   RR H  A G
Sbjct:   95 GPRASAIARGPQAARWLVRVHSVRLLQHLVPELLVERRPLPGSGHLAAGLPLDRGQPRRGHGHAPG 160          
BLAST of mRNA_L-elsbetiae_contig1103.933.1 vs. uniprot
Match: A0A843XX29_COLES (Succinate dehydrogenase (quinone) n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843XX29_COLES)

HSP 1 Score: 64.3 bits (155), Expect = 2.330e-8
Identity = 44/96 (45.83%), Postives = 57/96 (59.38%), Query Frame = 0
Query:   76 RPHEGVPPAAHVRPEGPRAGHGQLLRAVQEHRAVAEDED-RERPGRRAPAVHPGPQETRRYVRVHSVRLLQHVVPVVLVERRQVPRPRGPHAGLPL 170
            RPH+     AHVR EG   GH QL+RAVQE  AVAE +    R  +  P    GP +  R+VRVH +RLLQ+++P +LVE R +P P  P    P+
Sbjct:  174 RPHDDHAAVAHVRHEGSGGGHDQLIRAVQERGAVAEAQGLTARAWQGDPLEKEGPGKAGRHVRVHPLRLLQYLLPQLLVESRALPWPCRPSPCPPM 269          
BLAST of mRNA_L-elsbetiae_contig1103.933.1 vs. uniprot
Match: A0A6A5LEQ3_LUPAL (Succ_DH_flav_C domain-containing protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5LEQ3_LUPAL)

HSP 1 Score: 63.5 bits (153), Expect = 1.260e-7
Identity = 59/152 (38.82%), Postives = 71/152 (46.71%), Query Frame = 0
Query:   21 RLRAHGAGRAHQDQERTGPHVDVPAVLPRGHLRVVRDEHQREEHAGVPLRHRRGLRPHEGVPPAAHVRPEGPRAGHGQLLRAVQEHRAVAEDEDRERPGRRAPAVHPGPQETRRYVRVHSVRLLQHVVPVVLVERRQVPRPRGPHAGLPLDR 172
            R R   AGR    Q R         ++PR  +R  RDEHQR+E  G+     R          A   R   P  GH +LL+AV   +AV  D+  +  G  A AV    + T R VRVH VR+L  VVPVVLVE  QV   R PH   P  R
Sbjct:  260 RHRQDAAGRPAAHQVRRRRFAGPAPLVPRRRVRFGRDEHQRQERLGLHDEPERADAADRAASAAGPARDPRPDRGHDELLQAVPLDQAVP-DQRLDPAGEGAAAVAGRARGTGRRVRVHPVRVLLDVVPVVLVEPGQV---RAPHGSRPPQR 407          
BLAST of mRNA_L-elsbetiae_contig1103.933.1 vs. uniprot
Match: UPI0005F4295C (succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like isoform X2 n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F4295C)

HSP 1 Score: 55.1 bits (131), Expect = 4.110e-5
Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    9 KAVHEDLPGGHGRLRAHGAGRAHQDQERTGPHVDVPAVLPRGHLRVVRDEHQREEHAGV 67
            +AVH  +  G  ++R  GAGR    Q    P V +PAVLPRGH+R++RDEH+R +H G+
Sbjct:   76 EAVHAAVQRGSEQVRHDGAGRVDVYQGAARPDVVLPAVLPRGHMRMLRDEHRRRKHPGL 134          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1103.933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A3L6T8N9_PANMI6.560e-1550.85Succinate dehydrogenase n=1 Tax=Panicum miliaceum ... [more]
A0A8H5BRN4_9AGAR3.730e-1453.33Succinate dehydrogenase (quinone) n=1 Tax=Tulosesu... [more]
A0A7J8A1C6_MYOMY2.840e-1150.00Succinate dehydrogenase complex iron sulfur subuni... [more]
A0A212LJ26_9HYPH1.430e-840.86Uncharacterized protein n=1 Tax=uncultured Pleomor... [more]
T1AYL4_9ZZZZ2.290e-859.09Succinate dehydrogenase iron-sulfur subunit (Fragm... [more]
A0A843XX29_COLES2.330e-845.83Succinate dehydrogenase (quinone) n=1 Tax=Colocasi... [more]
A0A6A5LEQ3_LUPAL1.260e-738.82Succ_DH_flav_C domain-containing protein n=1 Tax=L... [more]
UPI0005F4295C4.110e-547.46succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1103contigL-elsbetiae_contig1103:21577..27826 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1103.933.1mRNA_L-elsbetiae_contig1103.933.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1103 20439..27826 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1103.933.1 ID=prot_L-elsbetiae_contig1103.933.1|Name=mRNA_L-elsbetiae_contig1103.933.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=276bp
LSLRHAGPKAVHEDLPGGHGRLRAHGAGRAHQDQERTGPHVDVPAVLPRG
HLRVVRDEHQREEHAGVPLRHRRGLRPHEGVPPAAHVRPEGPRAGHGQLL
RAVQEHRAVAEDEDRERPGRRAPAVHPGPQETRRYVRVHSVRLLQHVVPV
VLVERRQVPRPRGPHAGLPLDRRLARRLHQGASGGPRRCLQAIPVSHDHE
LHQDVPEAPQPRQGDRQHQEEGARALGLAMHHKQRVTYTYWPRYEWGPFF
WSACASPVEGRAGGSGSGGCRSVRP*
back to top