prot_L-elsbetiae_contig11010.920.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11010.920.1
Unique Nameprot_L-elsbetiae_contig11010.920.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length450
Homology
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BLAST of mRNA_L-elsbetiae_contig11010.920.1 vs. uniprot
Match: D8LQY7_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY7_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 6.800e-5
Identity = 40/73 (54.79%), Postives = 49/73 (67.12%), Query Frame = 0 
Query:  361 GGDVSSLHGDEAV-VPG--VAGTRVITSSFALNSNHGDPNAAGGGSDAHNAVNCWSDGVFESSGDSTAEASGK 430
            GG+VSSLHGDEA  +PG  V G+R    +FA NS+H D    GGG+      N WSDGVFESSG+ST  A+G+
Sbjct: 1027 GGEVSSLHGDEAPSIPGGRVYGSRQHCDAFADNSDHSDD---GGGN-----TNVWSDGVFESSGNSTPGAAGR 1091
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BLAST of mRNA_L-elsbetiae_contig11010.920.1 vs. uniprot
Match: A0A6H5LDX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDX5_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 9.330e-5
Identity = 41/93 (44.09%), Postives = 56/93 (60.22%), Query Frame = 0 
Query:   22 DDGMRGPVRVGRRFAAASPNTSRGXXXXXXXAFRXXXKMASFFDVYSRGSSRHGRSDSSSGSSYSLDSGADESATAXXXXV-----VRRNTRK 109
            DDGM+G +R+G RFA+A   + R        A+R    +ASFF++YS+G+SRH R DSSS S  S DS A++S  A          VRRN+R+
Sbjct: 1332 DDGMQGGIRIGARFASAP--SMRRRRSSGGSAYRRGH-LASFFEMYSKGNSRHRRGDSSSSSICSFDSPAEDSGGANRGNKKGISPVRRNSRR 1421
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11010.920.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQY7_ECTSI6.800e-554.79TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LDX5_9PHAE9.330e-544.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11010contigL-elsbetiae_contig11010:1783..3516 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11010.920.1mRNA_L-elsbetiae_contig11010.920.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11010 1783..3518 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11010.920.1 ID=prot_L-elsbetiae_contig11010.920.1|Name=mRNA_L-elsbetiae_contig11010.920.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=450bp
TGGGAHAGHADPSQEDRKAAADDGMRGPVRVGRRFAAASPNTSRGGGGGK
RAAFRGGGKMASFFDVYSRGSSRHGRSDSSSGSSYSLDSGADESATAAAA
AVVRRNTRKTKGAPRRRDSTRLRRGRSGASGRSNSSATGKSGGGGRTSRT
SSTSRTSRDSGKTSGARGKSARGLRVARPKGSTVGPSSARKFRGGSGSGG
VEQQLERRRPVSCPATVSARMVARSGGGGVAGGSAADGISGVADGGGGKG
GVLAGDGKAWGAGRRSRSSGSIKAAPARSTRPPDLAYASSYSEDDETTPY
DSSEFSSDSSSSSPSSLSSSDDDDEDSSYSSSLRSSSVFSGSRPSSGGGS
SSNYGLDITGGGDVSSLHGDEAVVPGVAGTRVITSSFALNSNHGDPNAAG
GGSDAHNAVNCWSDGVFESSGDSTAEASGKPTRGGGAREGGQRSHAASAA
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