prot_L-elsbetiae_contig10983.884.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10983.884.1
Unique Nameprot_L-elsbetiae_contig10983.884.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length190
Homology
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BLAST of mRNA_L-elsbetiae_contig10983.884.1 vs. uniprot
Match: D7FIA3_ECTSI (Ankyrin repeat domain-containing protein 39 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIA3_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 2.870e-7
Identity = 25/38 (65.79%), Postives = 32/38 (84.21%), Query Frame = 0 
Query:  152 KDKVGDRPANCIRRTKNPDGVAERLRNALLDLSDSEDT 189
            KDKVGD+P +CIRR +  +G+  RLRNALLDLSDSE++
Sbjct:   95 KDKVGDQPIHCIRRKRTSEGLVTRLRNALLDLSDSEES 132
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10983.884.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIA3_ECTSI2.870e-765.79Ankyrin repeat domain-containing protein 39 n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 122..151
e-value: 0.0084
score: 25.3
coord: 74..104
e-value: 0.33
score: 20.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 122..154
score: 13.197
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..176
e-value: 3.0E-20
score: 74.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 43..170
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 71..153
e-value: 2.8E-10
score: 40.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 40..188
score: 16.016
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 58..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10983contigL-elsbetiae_contig10983:3043..4246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10983.884.1mRNA_L-elsbetiae_contig10983.884.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10983 3043..4246 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10983.884.1 ID=prot_L-elsbetiae_contig10983.884.1|Name=mRNA_L-elsbetiae_contig10983.884.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=190bp
SEERKKHERRRRRCPVVKIEKYLNNNEHGEGEKKEDGAAGSNRSLARTIM
QEDVAGFLRLVQEEGACVRDTDCHGWSPLHWACSRGSTVMTYAILKEMRS
SQEAGATDDAISNYLNATEELSGWTALHLATIAGKLDVVYLLLEAGCDSQ
VKDKVGDRPANCIRRTKNPDGVAERLRNALLDLSDSEDT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom