prot_L-elsbetiae_contig10974.874.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10974.874.1
Unique Nameprot_L-elsbetiae_contig10974.874.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length153
Homology
BLAST of mRNA_L-elsbetiae_contig10974.874.1 vs. uniprot
Match: A0A6H5JJY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY6_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 3.410e-18
Identity = 35/42 (83.33%), Postives = 39/42 (92.86%), Query Frame = 0
Query:  112 GDASGHPLDEGGCFVCKSNDQQDLILLCDGCDGEYHTFCVRP 153
            GD +GHPLD+GGCFVCK ND+QDLILLCDGC+GEYHTFCV P
Sbjct:  104 GDPNGHPLDQGGCFVCKKNDKQDLILLCDGCEGEYHTFCVDP 145          
BLAST of mRNA_L-elsbetiae_contig10974.874.1 vs. uniprot
Match: D7FHY8_ECTSI (Trithorax 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY8_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 4.320e-13
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0
Query:  118 PLDEGGCFVCKSNDQQDLILLCDGCDGEYHTFCVRP 153
            P  +GGCFVCK ND+QDLILLCDGC+GEYHTFCV P
Sbjct:  366 PAAKGGCFVCKKNDKQDLILLCDGCEGEYHTFCVDP 401          
BLAST of mRNA_L-elsbetiae_contig10974.874.1 vs. uniprot
Match: H3GP62_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GP62_PHYRM)

HSP 1 Score: 62.4 bits (150), Expect = 2.110e-8
Identity = 27/47 (57.45%), Postives = 31/47 (65.96%), Query Frame = 0
Query:  107 EAPVVGDASGHPLDEGGCFVCKSNDQQDLILLCDGCDGEYHTFCVRP 153
            +APVVG    H     GC VC S+   D ILLCDGCDGEYHT+C+ P
Sbjct:   15 KAPVVGGPHAH---SNGCVVCGSDQNGDSILLCDGCDGEYHTYCLVP 58          
BLAST of mRNA_L-elsbetiae_contig10974.874.1 vs. uniprot
Match: A0A7S1J8J5_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J8J5_9EUGL)

HSP 1 Score: 58.9 bits (141), Expect = 3.100e-7
Identity = 20/34 (58.82%), Postives = 27/34 (79.41%), Query Frame = 0
Query:  120 DEGGCFVCKSNDQQDLILLCDGCDGEYHTFCVRP 153
            +E GC  C SN +QD++L+CDGC+ EYHTFC+ P
Sbjct:   72 EETGCAACGSNGEQDVLLVCDGCEAEYHTFCLDP 105          
BLAST of mRNA_L-elsbetiae_contig10974.874.1 vs. uniprot
Match: A0A5D6XZG4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZG4_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 4.480e-7
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 0
Query:  116 GHP-LDEGGCFVCKSNDQQDLILLCDGCDGEYHTFCVRP 153
            G+P +   GC VC  +  QD ILLCDGCDGEYHT+C+ P
Sbjct:   16 GNPHMHSNGCVVCGLDHNQDSILLCDGCDGEYHTYCLVP 54          
BLAST of mRNA_L-elsbetiae_contig10974.874.1 vs. uniprot
Match: G4ZWK5_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZWK5_PHYSP)

HSP 1 Score: 58.5 bits (140), Expect = 4.570e-7
Identity = 26/46 (56.52%), Postives = 29/46 (63.04%), Query Frame = 0
Query:  108 APVVGDASGHPLDEGGCFVCKSNDQQDLILLCDGCDGEYHTFCVRP 153
            A VVG    H     GC VC S+   D ILLCDGCDGEYHT+C+ P
Sbjct:   15 AAVVGGPHAH---SNGCAVCGSDQNGDSILLCDGCDGEYHTYCLVP 57          
BLAST of mRNA_L-elsbetiae_contig10974.874.1 vs. uniprot
Match: A0A2P4YUW9_9STRA (Histone deacetylase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YUW9_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 4.580e-7
Identity = 25/44 (56.82%), Postives = 28/44 (63.64%), Query Frame = 0
Query:  110 VVGDASGHPLDEGGCFVCKSNDQQDLILLCDGCDGEYHTFCVRP 153
            VVG    H     GC VC S+   D ILLCDGCDGEYHT+C+ P
Sbjct:   17 VVGGPHAH---SNGCVVCGSDQNGDSILLCDGCDGEYHTYCLVP 57          
BLAST of mRNA_L-elsbetiae_contig10974.874.1 vs. uniprot
Match: W2QGP4_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QGP4_PHYPN)

HSP 1 Score: 58.2 bits (139), Expect = 6.170e-7
Identity = 22/39 (56.41%), Postives = 26/39 (66.67%), Query Frame = 0
Query:  115 SGHPLDEGGCFVCKSNDQQDLILLCDGCDGEYHTFCVRP 153
            +G      GC VC S+   D ILLCDGCDGEYHT+C+ P
Sbjct:   20 AGPHAQSNGCVVCGSDQNGDSILLCDGCDGEYHTYCLVP 58          
BLAST of mRNA_L-elsbetiae_contig10974.874.1 vs. uniprot
Match: V9FLV3_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1569 TaxID=1317065 RepID=V9FLV3_PHYPR)

HSP 1 Score: 58.2 bits (139), Expect = 6.170e-7
Identity = 22/39 (56.41%), Postives = 26/39 (66.67%), Query Frame = 0
Query:  115 SGHPLDEGGCFVCKSNDQQDLILLCDGCDGEYHTFCVRP 153
            +G      GC VC S+   D ILLCDGCDGEYHT+C+ P
Sbjct:   20 AGPHAQSNGCVVCGSDQNGDSILLCDGCDGEYHTYCLVP 58          
BLAST of mRNA_L-elsbetiae_contig10974.874.1 vs. uniprot
Match: A0A2R7X5M2_ONCFA (PHD-type domain-containing protein (Fragment) n=1 Tax=Oncopeltus fasciatus TaxID=7536 RepID=A0A2R7X5M2_ONCFA)

HSP 1 Score: 53.1 bits (126), Expect = 8.720e-7
Identity = 18/36 (50.00%), Postives = 26/36 (72.22%), Query Frame = 0
Query:  118 PLDEGGCFVCKSNDQQDLILLCDGCDGEYHTFCVRP 153
            PL++  C  C+  D+++ +LLCDGCD  YHTFC+ P
Sbjct:   14 PLEKYFCMNCEGGDEEESMLLCDGCDDSYHTFCLVP 49          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10974.874.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJY6_9PHAE3.410e-1883.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHY8_ECTSI4.320e-1380.56Trithorax 3 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
H3GP62_PHYRM2.110e-857.45Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A7S1J8J5_9EUGL3.100e-758.82Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A5D6XZG4_9STRA4.480e-758.97Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
G4ZWK5_PHYSP4.570e-756.52Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A2P4YUW9_9STRA4.580e-756.82Histone deacetylase n=1 Tax=Phytophthora palmivora... [more]
W2QGP4_PHYPN6.170e-756.41Uncharacterized protein n=8 Tax=Phytophthora paras... [more]
V9FLV3_PHYPR6.170e-756.41Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A2R7X5M2_ONCFA8.720e-750.00PHD-type domain-containing protein (Fragment) n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 92..153
e-value: 5.2E-9
score: 38.0
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..153
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 113..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10974contigL-elsbetiae_contig10974:3540..4935 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10974.874.1mRNA_L-elsbetiae_contig10974.874.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10974 3538..4935 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10974.874.1 ID=prot_L-elsbetiae_contig10974.874.1|Name=mRNA_L-elsbetiae_contig10974.874.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=153bp
WCACVCAAVTLHLNRVNRHNFAGSRGSSQGEKLSPLSLSLSLFLPFPNQP
RGHRLSGLVRMEEPSTPATPTAPGSGANGDGDISSSRAVDAATADATAAP
PPLDAAEAPVVGDASGHPLDEGGCFVCKSNDQQDLILLCDGCDGEYHTFC
VRP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD