prot_L-elsbetiae_contig10965.867.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10965.867.1
Unique Nameprot_L-elsbetiae_contig10965.867.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length89
Homology
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BLAST of mRNA_L-elsbetiae_contig10965.867.1 vs. uniprot
Match: A0A6H5L7G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7G0_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 1.290e-13
Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 0 
Query:    2 QRLWAMALLTLLPSANSRVAKNVDQIVDLCVGVVTEEQGDGGTCVKEGLELLSSEEPEENSSSLP 66
            +RLWAMALL LLPSANS V KN+DQIV++CV V+TEE+ DGG  +KE L      EP+  S+S P
Sbjct:   18 RRLWAMALLKLLPSANSGVIKNLDQIVNICVDVLTEEREDGGKRLKESLAQPPVGEPDSASASEP 82
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BLAST of mRNA_L-elsbetiae_contig10965.867.1 vs. uniprot
Match: D7G019_ECTSI (Similar to importin 11 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G019_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 2.430e-12
Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 0 
Query:    2 QRLWAMALLTLLPSANSRVAKNVDQIVDLCVGVVTEEQGDGGTCVKEGLELLSSEEPEENSSSLP 66
            +RLWAMALL LLPSANS V KN+DQIV++CV V+TEE+ DGG  +KE L      EP+  S+S P
Sbjct: 1015 RRLWAMALLKLLPSANSGVIKNLDQIVNICVDVLTEEREDGGKRLKESLAQPPVGEPDSASASEP 1079
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10965.867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7G0_9PHAE1.290e-1360.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G019_ECTSI2.430e-1260.00Similar to importin 11 n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..88
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.766

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10965contigL-elsbetiae_contig10965:1841..3205 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10965.867.1mRNA_L-elsbetiae_contig10965.867.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10965 1831..3205 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10965.867.1 ID=prot_L-elsbetiae_contig10965.867.1|Name=mRNA_L-elsbetiae_contig10965.867.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp
MQRLWAMALLTLLPSANSRVAKNVDQIVDLCVGVVTEEQGDGGTCVKEGL
ELLSSEEPEENSSSLPPNPLCSLGCRRREEPTSPSQRT*
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