prot_L-elsbetiae_contig10962.864.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10962.864.1
Unique Nameprot_L-elsbetiae_contig10962.864.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length94
Homology
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BLAST of mRNA_L-elsbetiae_contig10962.864.1 vs. uniprot
Match: D8LFS1_ECTSI (DUF1279 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS1_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 3.280e-45
Identity = 73/94 (77.66%), Postives = 86/94 (91.49%), Query Frame = 0 
Query:    1 EYLKRFLKKYGRVAAGFHISVFLTTLGTCYTVVDYGGLDITALVKNIPILADNLPPASAGNLAVAYGMTSAIGPPRAVLTIMLTPKIAKFFAGR 94
            EYLK F+K+YGRVAA FH+SVFL TLGTCY+++DYGGLDI  LVK++PILADNLPPA AGNLA+AYGMTSAIGPPRAVLT+ +TP+IA+F AGR
Sbjct:  129 EYLKHFMKRYGRVAATFHMSVFLGTLGTCYSLIDYGGLDIAELVKDVPILADNLPPAGAGNLAIAYGMTSAIGPPRAVLTVTVTPRIARFLAGR 222
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BLAST of mRNA_L-elsbetiae_contig10962.864.1 vs. uniprot
Match: A0A024GJM7_9STRA (DUF1279 domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GJM7_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 3.560e-14
Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 0 
Query:    1 EYLKRFLKKYGRVAAGFHISVFLTTLGTCYTVVDYGGLDITALVKNIPILADNLPPASAGNLAVAYGMTSAIGPPRAVLTIMLTPKIAKFFA 92
            E L+  +KKYG++AA FH S+F  T G  Y V+   G+D+   +  IP++      ASAG+LA AY  T A GP R +LTI  TP +A+  A
Sbjct:    3 EQLRVVMKKYGKIAAAFHASMFAATFGASYGVIR-SGVDVETFLDRIPMVDARKVDASAGSLACAYIATLATGPARGLLTITATPMLARLLA 93
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10962.864.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFS1_ECTSI3.280e-4577.66DUF1279 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A024GJM7_9STRA3.560e-1443.48DUF1279 domain-containing protein n=2 Tax=Albugo c... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009688Domain of unknown function DUF1279PFAMPF06916DUF1279coord: 3..86
e-value: 4.2E-15
score: 56.1
NoneNo IPR availablePANTHERPTHR21377UNCHARACTERIZEDcoord: 3..92
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10962contigL-elsbetiae_contig10962:3524..3805 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10962.864.1mRNA_L-elsbetiae_contig10962.864.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10962 3524..3805 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10962.864.1 ID=prot_L-elsbetiae_contig10962.864.1|Name=mRNA_L-elsbetiae_contig10962.864.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=94bp
EYLKRFLKKYGRVAAGFHISVFLTTLGTCYTVVDYGGLDITALVKNIPIL
ADNLPPASAGNLAVAYGMTSAIGPPRAVLTIMLTPKIAKFFAGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009688DUF1279