prot_L-elsbetiae_contig10952.859.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10952.859.1
Unique Nameprot_L-elsbetiae_contig10952.859.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length179
Homology
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BLAST of mRNA_L-elsbetiae_contig10952.859.1 vs. uniprot
Match: D8LEB0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEB0_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 3.040e-90
Identity = 139/176 (78.98%), Postives = 157/176 (89.20%), Query Frame = 0 
Query:    1 MDDETA--DGGQVAAGTMRDLTAGHSEFLARRGFAAGLVSHFLEETNCEFRVLQGGTSCGMTAHQLQEAAVRLEEAFVPAVKRLRERASMDVVLDSLFEGKDDAGEFVVRFEVSITRCHPEDIESSPTPALQECAGAIREAIREDGVPEQSTHEVVFVGRPMWELVSPVLDFSAKA 174
            MDDETA  +GGQVAA  MR LT+G  EFLARRGFAAGLVSHFLEETNCEFRVLQGG SCGM A QL++AA RLEE FVPAVKRLR R+S+DVVLDSLF+G DDAG+FVVRFEV++TRCHPEDI+SSP PAL+ECA AI+EA+R++GV ++ THEVVFVGRPMWELVSPVLD SAKA
Sbjct:  297 MDDETAAEEGGQVAAERMRALTSGQGEFLARRGFAAGLVSHFLEETNCEFRVLQGGASCGMNAQQLEDAAARLEEVFVPAVKRLRARSSVDVVLDSLFQGADDAGDFVVRFEVTLTRCHPEDIDSSPAPALRECASAIKEAVRDEGVNDKDTHEVVFVGRPMWELVSPVLDLSAKA 472
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10952.859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEB0_ECTSI3.040e-9078.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.420.40coord: 14..157
e-value: 1.6E-5
score: 25.7
NoneNo IPR availableGENE3D3.90.640.10coord: 28..131
e-value: 1.6E-5
score: 25.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10952contigL-elsbetiae_contig10952:2899..6028 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10952.859.1mRNA_L-elsbetiae_contig10952.859.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10952 1843..6059 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10952.859.1 ID=prot_L-elsbetiae_contig10952.859.1|Name=mRNA_L-elsbetiae_contig10952.859.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=179bp
MDDETADGGQVAAGTMRDLTAGHSEFLARRGFAAGLVSHFLEETNCEFRV
LQGGTSCGMTAHQLQEAAVRLEEAFVPAVKRLRERASMDVVLDSLFEGKD
DAGEFVVRFEVSITRCHPEDIESSPTPALQECAGAIREAIREDGVPEQST
HEVVFVGRPMWELVSPVLDFSAKAAFSG*
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