prot_L-elsbetiae_contig10942.849.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10942.849.1
Unique Nameprot_L-elsbetiae_contig10942.849.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length131
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10942.849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 123..130
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..122
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 24..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10942contigL-elsbetiae_contig10942:2502..2894 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10942.849.1mRNA_L-elsbetiae_contig10942.849.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10942 2391..2971 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10942.849.1 ID=prot_L-elsbetiae_contig10942.849.1|Name=mRNA_L-elsbetiae_contig10942.849.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp
MYGKGSGRGMLESAAAPTLAQLGWVPPLLLMLWYVSCLLLTVGLPAQTTL
VFARKRNVCLSFLLGTHEARRISEVLSSATFKPGGLFTCGPSEKKRCASG
LAFLIALVLVYGLFFCVVRPSLSILYRYNV*
back to top