prot_L-elsbetiae_contig1092.837.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1092.837.1
Unique Nameprot_L-elsbetiae_contig1092.837.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length454
Homology
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BLAST of mRNA_L-elsbetiae_contig1092.837.1 vs. uniprot
Match: D7G0L4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0L4_ECTSI)

HSP 1 Score: 612 bits (1578), Expect = 3.700e-217
Identity = 321/458 (70.09%), Postives = 352/458 (76.86%), Query Frame = 0 
Query:    1 MGASASTLYDQGGSWGLRFVPTCDLMEQVHVCLVPSEREFLLACLDEIHRRCDSLINGKKQAAIFHEQGAVEALLEMLGMFKLDEVFLRQAVRTLIPLCGQDAMILDHFLDLGGRVALDETLEMHKDDQKIREDGRTLTSTIHRHAKGDAKRDATRVSMACSRYCPTCRPLVDCPDFLGPAGNRLSADPAQQCLRPALGKRLVYRGTNGMG--MDDFCRRDAAEGHDDEEMDPVEADLVRIQRLLEHMEKFPKILDVVEPCVDALIAVGKSAMTEAVLESKCVFKLIKAMKTFPETRSLQWKGLLAITHLAKRDAVCFDLGKAGAVQLLVKMWPEWEDDEMRQLLLWAMNEVARLETNQLRMSAERVGFMLRETMEPAPARLAVTGAMVTAEQAGHYCVPVKLKRLYRDRKLGSPFAKREED--RETLQKVA-VGVPMAKAQFGKAGDGWKEGEGGLV 453
            MGASASTLY QGGSWGL+FVPT DLMEQVH CLVPSER+FLLACLDE+H RCDSL++G+KQ A FHEQGAVEALLEMLGMFKLDEVFLRQAVRTLIPLCGQD  +LDHFLDLGGRVALDETL MH DD  +                                YC  CRPLVDCPD LGPAGNRLS+D  Q+CL+   GKRLVYRG++G G  +DD       E  D+   DP   DLVRI+RL+EHMEKFPK LDVVEPCVDALIAVGKSA T+AVLES CVFKL+KAMKTF  TRSLQWKGLLAI H AK+D VCFDLGKAG + LLV MWP+W+DDEMRQLLLWA NE        LRMS ERVG +LRE MEPAPARLAVTGAMVTAEQ GHYCVPVKLKRLYR+RKLGSPFAK +E+  RE  +  A +  P+ KAQFGKAGDGWKEGE GL+
Sbjct:    1 MGASASTLYTQGGSWGLKFVPTYDLMEQVHTCLVPSERDFLLACLDEMHCRCDSLLHGRKQVAAFHEQGAVEALLEMLGMFKLDEVFLRQAVRTLIPLCGQDDAVLDHFLDLGGRVALDETLGMHTDDHHM--------------------------------YCSACRPLVDCPDLLGPAGNRLSSDSVQRCLQRGAGKRLVYRGSSGNGPIVDDV------EDEDENAADPTSDDLVRIRRLVEHMEKFPKTLDVVEPCVDALIAVGKSAATQAVLESTCVFKLVKAMKTFANTRSLQWKGLLAIIHFAKKDEVCFDLGKAGVIPLLVAMWPQWDDDEMRQLLLWAFNE--------LRMSVERVGALLREAMEPAPARLAVTGAMVTAEQVGHYCVPVKLKRLYRERKLGSPFAKGDEEANRENEKNAAALARPLTKAQFGKAGDGWKEGEHGLL 412
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BLAST of mRNA_L-elsbetiae_contig1092.837.1 vs. uniprot
Match: A0A835YWK4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWK4_9STRA)

HSP 1 Score: 140 bits (354), Expect = 9.500e-33
Identity = 100/322 (31.06%), Postives = 145/322 (45.03%), Query Frame = 0 
Query:  228 EMDPVEADLVRIQRLLEHMEKFPKILDVVEPCVDALIAVGKSAMTEAVLESKCVFKLIKAMKTFPETRSLQWKGLLAITHLAKRDAVCFDLG-------------------------------------------------------KAGAVQLLVKMWPEWE-DDEMRQLLLWAMNEVARLETNQLRMSAERVGFMLRETMEPAPA---RLAVTGAMVTAEQ-----------------AG----------------HYCVPVKLKRLYRDRKLGSPFAKRE----EDRETLQKVAVGVPMAKAQFGKAGDGWKEGEGGLV 453
            E DPV  ++ RI+R++ H++K+P +  V +PCVDA IA+GK ++  AV  S C+  L+ AM+ F   R++ WKGLLA+ HLA+ D +C DL                                                        KAG V +L+++W  W+ D+E+RQL+L+A+  ++ LE NQLR    RV   LR   E  P      A  G  V  +Q                 AG                 YC+P+ LKR Y D+ LGSPFAK +    E     Q     +     ++G+AG+ WK+G+ GLV
Sbjct:  262 EGDPVPGEMRRIERVMRHLKKYPTVAVVADPCVDAFIALGKGSIPAAVAGSGCLPLLVNAMEAFASDRAIVWKGLLAVAHLARNDEMCSDLDMMCNNQLAVDAYNGLWVHPLQALAFASAVHRSEVRDSHVHYRPSAHAQDCCHSARKAGVVPMLMQLWESWKSDEEIRQLVLFALGPISTLEQNQLRCRNCRVAAALRPVFELDPVIAGESASAGPNVMLKQLQEVLRCRLPPPLCPMRAGASAAPPANTPPTPPPHRYCIPLALKRAYLDKALGSPFAKEDGGSAEQHTENQAQVARMYALPPKYGRAGESWKDGQQGLV 583
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1092.837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0L4_ECTSI3.700e-21770.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YWK4_9STRA9.500e-3331.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 221..369
e-value: 4.1E-6
score: 27.8
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 57..355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1092contigL-elsbetiae_contig1092:11745..20389 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1092.837.1mRNA_L-elsbetiae_contig1092.837.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1092 11345..20389 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1092.837.1 ID=prot_L-elsbetiae_contig1092.837.1|Name=mRNA_L-elsbetiae_contig1092.837.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=454bp
MGASASTLYDQGGSWGLRFVPTCDLMEQVHVCLVPSEREFLLACLDEIHR
RCDSLINGKKQAAIFHEQGAVEALLEMLGMFKLDEVFLRQAVRTLIPLCG
QDAMILDHFLDLGGRVALDETLEMHKDDQKIREDGRTLTSTIHRHAKGDA
KRDATRVSMACSRYCPTCRPLVDCPDFLGPAGNRLSADPAQQCLRPALGK
RLVYRGTNGMGMDDFCRRDAAEGHDDEEMDPVEADLVRIQRLLEHMEKFP
KILDVVEPCVDALIAVGKSAMTEAVLESKCVFKLIKAMKTFPETRSLQWK
GLLAITHLAKRDAVCFDLGKAGAVQLLVKMWPEWEDDEMRQLLLWAMNEV
ARLETNQLRMSAERVGFMLRETMEPAPARLAVTGAMVTAEQAGHYCVPVK
LKRLYRDRKLGSPFAKREEDRETLQKVAVGVPMAKAQFGKAGDGWKEGEG
GLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold