prot_L-elsbetiae_contig109.820.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig109.820.1
Unique Nameprot_L-elsbetiae_contig109.820.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length440
Homology
BLAST of mRNA_L-elsbetiae_contig109.820.1 vs. uniprot
Match: D8LLY0_ECTSI (WD-40 repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY0_ECTSI)

HSP 1 Score: 624 bits (1609), Expect = 1.630e-201
Identity = 346/535 (64.67%), Postives = 381/535 (71.21%), Query Frame = 0
Query:    4 GGWGADGAGPP-SALAYDSEEERIGALAPKTDAEVLMEQRKQKAQKMIAKKPGTTLNPRKRYERHKEERLHEKQKAAIAAAAALEAAKEAEETRRMVLEELRSWDAYELNTRNHARMIEQA-QDRQAAAQRLHQEQEHRLACEEEGLTFDHGVAVRHRRWRASPALATVLPAHPCPAHAMRQSADGRWILSGGDDLTVRLWDTEAFARKLADTKNERRAAKAATLAGAVAANLALGWECACELVGHTSAVRDVEFNPLFVGPPKDQVETMDGGGEKGGGGEAAPVRLECMLASASADLTVRIWDLSFNPRTARFILRGHKGVVYTCRFAPSGDRLASCSADGTVLMWNVLN-----------------------------------------------------------------------------------------------------EFRERLKIPQTVLDQCDASPCPSQAVSNGFSLTVTILNDFGRDTRTEEYYRGCKLILRARSLKKFTGLYVAGVSAEGLWEGFE 435
            GGWG  GAGPP SALAYDSEEER+ ALAPKTDAE+LME+RK KAQKM+AKKPGTTLNPRKRYE+ +EERL+E+Q        +LE AKE EE +RM+LEELRSWDAYELNTRNH RMIEQ  +DR AAA +L + +E RLACEEEGLTF+HGV V HRRWRAS ALATVLPAHPCP HAMRQS++GRWILSGGDDLTVRLWDTEAFARKL+D KNE+RAAKAA  AGAVAA+LALGWECA ELVGHT+AVRDVEFNPLF GPP+DQ +  + G E G G E APVRL C+LASAS DLTVRIWDLSFNPR ARF L+GHKGVV  CRFAPSGDRLASCSADGT+ +WNVLN                                                                                                     E+RE LKIP+TVL QCDASPCP+QAVSNGFSLTVTILND G+DTRTEEYYRGCKL+LRAR+LKKFTGLYVAGVSAEGLWEGFE
Sbjct:   33 GGWGT-GAGPPNSALAYDSEEERMKALAPKTDAEILMEERKLKAQKMLAKKPGTTLNPRKRYEQRQEERLYERQXXXXXXXXSLEVAKETEENKRMLLEELRSWDAYELNTRNHNRMIEQEREDRAAAANKLKESEERRLACEEEGLTFNHGVVVCHRRWRASSALATVLPAHPCPVHAMRQSSNGRWILSGGDDLTVRLWDTEAFARKLSDPKNEKRAAKAAARAGAVAADLALGWECARELVGHTAAVRDVEFNPLFGGPPEDQEDAQEEG-EGGPGSEGAPVRLACVLASASTDLTVRIWDLSFNPRVARFALKGHKGVVSACRFAPSGDRLASCSADGTIRLWNVLNGTNVFCYEXXXXXXXXXXXXXXXXXXXXXXDIGERAIRVWFADMPLYDRDPVQFGLRLRWTRSGLIKRVRANTESSAMGFFLSRQEDRESRESSDESEGEKEYRELLKIPKTVLTQCDASPCPTQAVSNGFSLTVTILNDSGKDTRTEEYYRGCKLVLRARALKKFTGLYVAGVSAEGLWEGFE 565          
BLAST of mRNA_L-elsbetiae_contig109.820.1 vs. uniprot
Match: A0A836CAF5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAF5_9STRA)

HSP 1 Score: 128 bits (322), Expect = 4.390e-28
Identity = 95/293 (32.42%), Postives = 140/293 (47.78%), Query Frame = 0
Query:   64 YERHKEERLHEKQKAAIAAAAALEAAKEAEETRRMVLEELRSWDAYELNTRNHARMIEQA-QDRQAAAQRLHQEQEHRLACEEEGLTFDHGVAVRHRRWRASPALATVLPAHPCPAHAMRQSADGRWILSGGDDLTVRLWDTEAFARKLADTKNERRAAKAATLAGAVAANLALGWECACELVGHTSAVRDVEFNPLFVGPPKDQVETMDGGGEKGGGGEAAPVRLECMLASASADLTVRIWDLSFNPRTARFILRGHK-GVVYTCRFAPSGDRLASCSADGTVLMWNVLNEF 354
            Y+R K     E +  A+    A+  A+EA E ++M+ EE R+WDAYELN RN+AR++  A ++++                +EEG+ F++G+AV +RRW+ SP L T L AH  P  A+  S+  R+I S   D  V+LWD +       D  +    +    L+       AL W+C   L GHT AV DV F P F    + +       G+        P RL+  + +A     V +WDLS + R  R  L  H   V     F+  G RL +   DG V +W+V   +
Sbjct:   64 YQRTKARARLELEAVAVQRRKAISDAREALERQKMLAEEKRTWDAYELNARNYARLVRLAHEEKEXXXXXXXXXXXXXXLQQEEGILFENGIAVGNRRWKNSPELKTALHAHTEPVLAIAVSSCLRYIASASADHCVKLWDMKPRETGCGDAVSAAPQSTKTELS-------ALNWDCVAVLAGHTRAVHDVAFAPHFSLHHRPRGAAAYRYGD--------PPRLDHTVVTAGGCGRVLVWDLSISARRPRHALDAHPHAVARAIAFSRDGARLVTGGGDGAVRLWDVAGGY 341          
BLAST of mRNA_L-elsbetiae_contig109.820.1 vs. uniprot
Match: UPI000B8CF034 (transcriptional corepressor LEUNIG-like isoform X1 n=5 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CF034)

HSP 1 Score: 62.4 bits (150), Expect = 1.140e-6
Identity = 60/204 (29.41%), Postives = 94/204 (46.08%), Query Frame = 0
Query:  184 SADGRWILSGGDDLTVRLWDTEAFARK---------LADTKNERRAAKAATLAGAVAANLALGWE------CACE-------LVGHTSAVRDVEFNPLFVGPPKDQVETMDGGGE------KGGG------GEAAPVRLECMLA---SASADLTVRIWDLSFNPRTARFILRGHKGVVYTCRFAPSGDRLASCSADGTVLMWNV 350
            S+DG+ + +GG D  V LW TE+FA K         + D +    +   + LA + A      W+      CA +         GH++AV  ++F+P      +D + + D   E      K G       G A  +R +  L    +A+AD  + I D+    +  RF L+GHKG+V++  + PSG+ LAS S D  V +W V
Sbjct:  590 SSDGKLLATGGHDKKVVLWSTESFAIKSTLEEHGQWITDVRFNPSSPSMSRLATSSADKTVRVWDVDNTHLCASQPGYSLRTFTGHSTAVMSLDFHPS----KEDLICSCDNNNEIRYWSIKNGSCAGVFKGGATQIRFQPRLGRIIAAAADNFISILDVE--TQVCRFKLQGHKGLVHSICWDPSGEYLASVS-DDLVKVWTV 786          
BLAST of mRNA_L-elsbetiae_contig109.820.1 vs. uniprot
Match: A0A7S1XYL7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYL7_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.260e-6
Identity = 42/109 (38.53%), Postives = 53/109 (48.62%), Query Frame = 0
Query:  292 LASASADLTVRIWDLSF-----------NPRTARFILRGHKGVVYTCRFAPSGDRLASCSADGTVLMWNVLNEFRERLKIPQTVLDQCDASPCPSQAVSNGFSLTVTIL 389
            LASAS D TVRIWDL+            +      +L  H+G VY  R+AP G  LASC+ADG V++W++        K P   L    A+     A S  FS   TIL
Sbjct:   65 LASASYDRTVRIWDLAALDSVCDADGGADAAAQLRVLDAHEGAVYAVRYAPDGAVLASCAADGKVMVWDMRARGAVAAKRPVRALGAA-AAGVSDAAFSLSFSPRGTIL 172          
BLAST of mRNA_L-elsbetiae_contig109.820.1 vs. uniprot
Match: S3C4T4_OPHP1 (Wd repeat-containing protein n=1 Tax=Ophiostoma piceae (strain UAMH 11346) TaxID=1262450 RepID=S3C4T4_OPHP1)

HSP 1 Score: 60.8 bits (146), Expect = 2.700e-6
Identity = 28/59 (47.46%), Postives = 38/59 (64.41%), Query Frame = 0
Query:  291 MLASASADLTVRIWDLSFNPRTARFILRGHKGVVYTCRFAPSGDRLASCSADGTVLMWN 349
            +LA+ S D T RIWD      T +F L+ H+G V    ++P G RLASCS DGTV++W+
Sbjct:  169 LLATGSGDCTARIWDTETG--TPKFTLKKHRGWVLAVAWSPDGARLASCSMDGTVIVWD 225          
BLAST of mRNA_L-elsbetiae_contig109.820.1 vs. uniprot
Match: A0A091DG61_FUKDA (Apoptotic protease-activating factor 1 n=1 Tax=Fukomys damarensis TaxID=885580 RepID=A0A091DG61_FUKDA)

HSP 1 Score: 61.2 bits (147), Expect = 2.830e-6
Identity = 34/81 (41.98%), Postives = 50/81 (61.73%), Query Frame = 0
Query:  291 MLASASADLTVRIWDLSFNPRTARFILRGHKGVVYTCRFAPSGDRLASCSADGTVLMWNV--LNEFRERLKIPQTVLDQCD 369
            +LA+AS D  +++WDL  N +  R  + GH   V  CRF+P  + LASCSADGT+ +W+V   NE R+ + + Q  L+  D
Sbjct:  614 LLATASNDFFLKLWDL--NQKECRNTMFGHTNSVNHCRFSPDDEVLASCSADGTLKLWDVRSANE-RKSINVKQFFLNSED 691          
BLAST of mRNA_L-elsbetiae_contig109.820.1 vs. uniprot
Match: F7CG66_ORNAN (WD repeat, SAM and U-box domain-containing protein 1 n=5 Tax=Monotremata TaxID=9255 RepID=F7CG66_ORNAN)

HSP 1 Score: 59.7 bits (143), Expect = 5.810e-6
Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = 0
Query:  291 MLASASADLTVRIWDLSFNPRTARFILRGHKGVVYTCRFAPSGDRLASCSADGTVLMWNVLN 352
            +LA+ S D T+R++ L          L+GH   V+ CRF+PSG  LASCS DGT ++W+  N
Sbjct:   24 LLATCSLDKTIRLYSLGDFAELPHSPLKGHTYAVHCCRFSPSGHILASCSTDGTTVLWSSQN 85          
BLAST of mRNA_L-elsbetiae_contig109.820.1 vs. uniprot
Match: G1NUZ8_MYOLU (WD repeat, SAM and U-box domain-containing protein 1 n=6 Tax=Vespertilionidae TaxID=9431 RepID=G1NUZ8_MYOLU)

HSP 1 Score: 59.3 bits (142), Expect = 7.720e-6
Identity = 28/62 (45.16%), Postives = 38/62 (61.29%), Query Frame = 0
Query:  291 MLASASADLTVRIWDLSFNPRTARFILRGHKGVVYTCRFAPSGDRLASCSADGTVLMWNVLN 352
            +LA+ S D T+R++ LS     A   L+ H   V+ C F+PSG  LASCS DGT ++WN  N
Sbjct:   24 LLATCSLDKTIRLYSLSDFTELAHSPLKFHTYAVHCCCFSPSGHILASCSTDGTTVLWNTQN 85          
BLAST of mRNA_L-elsbetiae_contig109.820.1 vs. uniprot
Match: A0A7L0N6H7_9PASS (WD repeat, SAM and U-box domain-containing protein 1 (Fragment) n=2 Tax=Formicariidae TaxID=81882 RepID=A0A7L0N6H7_9PASS)

HSP 1 Score: 59.3 bits (142), Expect = 7.720e-6
Identity = 35/81 (43.21%), Postives = 44/81 (54.32%), Query Frame = 0
Query:  292 LASASADLTVRIWDLSFNPRTARFILRGHKGVVYTCRFAPSGDRLASCSADGTVLMWNVLNEFRERLKIPQTVLDQCDASP 372
            LA+ S D TVR++ LS         LRGH   V+ C F+PSG  LASCS DGT ++W+  +  R        VL Q  ASP
Sbjct:   25 LATCSLDKTVRVYSLSNFAELPYSPLRGHTYAVHCCCFSPSGGVLASCSTDGTAVLWDTRDGRR------LAVLGQPHASP 99          
BLAST of mRNA_L-elsbetiae_contig109.820.1 vs. uniprot
Match: UPI001C2E7D13 (apoptotic protease-activating factor 1 isoform X2 n=1 Tax=Peromyscus maniculatus bairdii TaxID=230844 RepID=UPI001C2E7D13)

HSP 1 Score: 59.7 bits (143), Expect = 8.080e-6
Identity = 27/62 (43.55%), Postives = 40/62 (64.52%), Query Frame = 0
Query:  289 ECMLASASADLTVRIWDLSFNPRTARFILRGHKGVVYTCRFAPSGDRLASCSADGTVLMWNV 350
            + +LA+ S D  +++WDL  N +  R  + GH   V  CRF+P  + LASCSADGT+ +W+V
Sbjct:  713 QLLLATGSNDFFLKLWDL--NQKECRNTMFGHTNSVIHCRFSPDDELLASCSADGTLKLWDV 772          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig109.820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLY0_ECTSI1.630e-20164.67WD-40 repeat-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CAF5_9STRA4.390e-2832.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI000B8CF0341.140e-629.41transcriptional corepressor LEUNIG-like isoform X1... [more]
A0A7S1XYL7_9STRA1.260e-638.53Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
S3C4T4_OPHP12.700e-647.46Wd repeat-containing protein n=1 Tax=Ophiostoma pi... [more]
A0A091DG61_FUKDA2.830e-641.98Apoptotic protease-activating factor 1 n=1 Tax=Fuk... [more]
F7CG66_ORNAN5.810e-643.55WD repeat, SAM and U-box domain-containing protein... [more]
G1NUZ8_MYOLU7.720e-645.16WD repeat, SAM and U-box domain-containing protein... [more]
A0A7L0N6H7_9PASS7.720e-643.21WD repeat, SAM and U-box domain-containing protein... [more]
UPI001C2E7D138.080e-643.55apoptotic protease-activating factor 1 isoform X2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 120..140
NoneNo IPR availableCOILSCoilCoilcoord: 82..103
NoneNo IPR availablePANTHERPTHR42968:SF10IP10415Pcoord: 292..350
coord: 169..350
NoneNo IPR availablePANTHERPTHR42968FAMILY NOT NAMEDcoord: 292..350
coord: 169..350
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 336..350
score: 35.22
coord: 190..204
score: 36.85
coord: 292..306
score: 44.29
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 310..349
e-value: 1.1E-8
score: 44.9
coord: 237..305
e-value: 2.2E-4
score: 30.6
coord: 164..203
e-value: 6.3E-5
score: 32.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 316..349
e-value: 1.3E-6
score: 29.0
coord: 170..203
e-value: 5.5E-5
score: 23.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 171..205
score: 10.843
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 317..350
score: 13.583
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 291..314
score: 8.938
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 102..232
e-value: 1.5E-6
score: 29.5
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 233..408
e-value: 6.8E-23
score: 83.5
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 292..306
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 336..350
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 190..204
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 171..212
score: 10.206
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 291..358
score: 16.164
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 163..352

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig109contigL-elsbetiae_contig109:16959..22555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig109.820.1mRNA_L-elsbetiae_contig109.820.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig109 16959..22555 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig109.820.1 ID=prot_L-elsbetiae_contig109.820.1|Name=mRNA_L-elsbetiae_contig109.820.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=440bp
EGSGGWGADGAGPPSALAYDSEEERIGALAPKTDAEVLMEQRKQKAQKMI
AKKPGTTLNPRKRYERHKEERLHEKQKAAIAAAAALEAAKEAEETRRMVL
EELRSWDAYELNTRNHARMIEQAQDRQAAAQRLHQEQEHRLACEEEGLTF
DHGVAVRHRRWRASPALATVLPAHPCPAHAMRQSADGRWILSGGDDLTVR
LWDTEAFARKLADTKNERRAAKAATLAGAVAANLALGWECACELVGHTSA
VRDVEFNPLFVGPPKDQVETMDGGGEKGGGGEAAPVRLECMLASASADLT
VRIWDLSFNPRTARFILRGHKGVVYTCRFAPSGDRLASCSADGTVLMWNV
LNEFRERLKIPQTVLDQCDASPCPSQAVSNGFSLTVTILNDFGRDTRTEE
YYRGCKLILRARSLKKFTGLYVAGVSAEGLWEGFEVSLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf