prot_L-elsbetiae_contig10760.704.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10760.704.1
Unique Nameprot_L-elsbetiae_contig10760.704.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length313
Homology
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BLAST of mRNA_L-elsbetiae_contig10760.704.1 vs. uniprot
Match: A0A6H5JPP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP0_9PHAE)

HSP 1 Score: 372 bits (956), Expect = 7.540e-115
Identity = 206/289 (71.28%), Postives = 232/289 (80.28%), Query Frame = 0 
Query:   24 LPCCGLSSISADG--GSPSTAGSSD--GNRPGSSVGYELTLAFSSTLRAARLPSVALEALHGATGLAMTGKQRAGWETEMAFVLLQMGRVGEAIVRLKSALEWDAGDLRVLQPLGAALVAQGKVAAGFHYLRTATDVQKSRIANVFGDLVRDQGLDPSVLDSSNEKGVLVTQRNWMAMYLGRALQGRWNELGDSVHVLRRVDSFLGRHFSVDSEISFMLGRELSKRGFQGESSHYLTSAAAPWNRQIYRIRSALSIPVVASSEQDLALVLAALERWLQGQEEPAVDKPP 308
            L  CGL  +S +G  G  + AG +D  G+  G+ VG+ELT+ FSS LRAARLPSVAL+ALHGA GL MT +QRA WETE A V LQ+GRVGEA+V LKSAL WDAGDLRVLQPLGAALVAQG VA GFHYLR A ++QKSRIA VF  +VR+QGLDPS+L++ N K      RNWMAM+LG ALQG+W +LG SVHVLRRVD+FL RHFS DSEISFMLGRELSKRGFQ ES HYLTSAAAPWNRQIYRIRSALSIP VASSEQDLAL +A LE WL+ QE P V+ PP
Sbjct:  185 LRTCGLLGVSIEGTSGLAAPAGKADLNGSERGN-VGFELTVIFSSVLRAARLPSVALDALHGAAGLTMTDRQRAAWETERALVWLQLGRVGEAVVGLKSALGWDAGDLRVLQPLGAALVAQGSVAEGFHYLREAAELQKSRIATVFEQIVRNQGLDPSILETKNRK------RNWMAMFLGWALQGKWKKLGGSVHVLRRVDNFLRRHFSADSEISFMLGRELSKRGFQKESWHYLTSAAAPWNRQIYRIRSALSIPTVASSEQDLALAMATLEGWLRRQE-PLVEDPP 465
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BLAST of mRNA_L-elsbetiae_contig10760.704.1 vs. uniprot
Match: D8LAX0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX0_ECTSI)

HSP 1 Score: 331 bits (848), Expect = 2.760e-100
Identity = 170/214 (79.44%), Postives = 185/214 (86.45%), Query Frame = 0 
Query:   87 MTGKQRAGWETEMAFVLLQMGRVGEAIVRLKSALEWDAGDLRVLQPLGAALVAQGKVAAGFHYLRTATDVQKSRIANVFGDLVRDQGLDPSVLDSSNEKGVLVTQRNWMAMYLGRALQGRWNELGDSVHVLRRVDSFLGRHFSVDSEISFMLGRELSKRGFQGESSHYLTSAAAPWNRQIYRIRSALSIPVVASSEQDLALVLAALERWLQGQE 300
            MT +QRA WETE A V LQ+GRVGEA+V LKSAL WDAGDLRVLQPLGAALVAQG VA GF YLR A ++QKSRIA VF  +VR+QGLDPSVL++ N K VLVTQRNWMAM+LG ALQG+W +LG SVHVLRRVD+FL RHFS DSEISFMLGRELSKRGFQ ES HYLTSAAAPWNRQIYRIRSALSIP VASSEQDLAL +AALE WL+ QE
Sbjct:    1 MTDRQRAAWETERALVWLQLGRVGEAVVGLKSALGWDAGDLRVLQPLGAALVAQGSVAEGFRYLREAAELQKSRIATVFEQIVRNQGLDPSVLETKNRKEVLVTQRNWMAMFLGWALQGKWKKLGGSVHVLRRVDNFLRRHFSADSEISFMLGRELSKRGFQKESWHYLTSAAAPWNRQIYRIRSALSIPTVASSEQDLALAMAALEGWLRRQE 214
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10760.704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JPP0_9PHAE7.540e-11571.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LAX0_ECTSI2.760e-10079.44TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 93..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10760contigL-elsbetiae_contig10760:1116..4568 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10760.704.1mRNA_L-elsbetiae_contig10760.704.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10760 1116..4568 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10760.704.1 ID=prot_L-elsbetiae_contig10760.704.1|Name=mRNA_L-elsbetiae_contig10760.704.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=313bp
SSPADLPAATAALPPSGGSVPPPLPCCGLSSISADGGSPSTAGSSDGNRP
GSSVGYELTLAFSSTLRAARLPSVALEALHGATGLAMTGKQRAGWETEMA
FVLLQMGRVGEAIVRLKSALEWDAGDLRVLQPLGAALVAQGKVAAGFHYL
RTATDVQKSRIANVFGDLVRDQGLDPSVLDSSNEKGVLVTQRNWMAMYLG
RALQGRWNELGDSVHVLRRVDSFLGRHFSVDSEISFMLGRELSKRGFQGE
SSHYLTSAAAPWNRQIYRIRSALSIPVVASSEQDLALVLAALERWLQGQE
EPAVDKPPSAPQQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf