prot_L-elsbetiae_contig10736.685.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10736.685.1
Unique Nameprot_L-elsbetiae_contig10736.685.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length109
Homology
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BLAST of mRNA_L-elsbetiae_contig10736.685.1 vs. uniprot
Match: D8LH17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH17_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 7.740e-13
Identity = 60/109 (55.05%), Postives = 68/109 (62.39%), Query Frame = 0 
Query:    1 RLRYERANQELQEEVKSLNLLKTAAAGFEEAKAKLGLVQSRSAELEKEAAALMKKASGDVDSLDKQLAKSTDKSVEEALLLVSKEAALKEVEAQLTAAQDRAKRAEQEA 109
            R RYE+AN ELQEEV++L+ LK AAAGFE+AK KL                               LA S DKSVEEALLLVSKEAALK+VEAQLTA +DRAK  E+EA
Sbjct:  211 RARYEKANLELQEEVEALSQLKDAAAGFEDAKIKLXXXXXXXXXXXX----XXXXXXXXXXXXXXXLAASVDKSVEEALLLVSKEAALKDVEAQLTAVKDRAKVLEKEA 315
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10736.685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH17_ECTSI7.740e-1355.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..48
NoneNo IPR availableCOILSCoilCoilcoord: 1..24
NoneNo IPR availableCOILSCoilCoilcoord: 81..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10736contigL-elsbetiae_contig10736:872..3547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10736.685.1mRNA_L-elsbetiae_contig10736.685.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10736 872..3547 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10736.685.1 ID=prot_L-elsbetiae_contig10736.685.1|Name=mRNA_L-elsbetiae_contig10736.685.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=109bp
RLRYERANQELQEEVKSLNLLKTAAAGFEEAKAKLGLVQSRSAELEKEAA
ALMKKASGDVDSLDKQLAKSTDKSVEEALLLVSKEAALKEVEAQLTAAQD
RAKRAEQEA
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