prot_L-elsbetiae_contig10727.677.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10727.677.1
Unique Nameprot_L-elsbetiae_contig10727.677.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length155
Homology
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BLAST of mRNA_L-elsbetiae_contig10727.677.1 vs. uniprot
Match: A0A6H5L8R1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8R1_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 7.650e-15
Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 0 
Query:   12 MTNEGRWTDNGQPLTLAEGRTVMPMMDQVEQAIVARLLPSQAAE 55
            M NEGRWTDNGQPLTLAEGRTVMPM+DQ EQAIVARLLPS A +
Sbjct:   55 MANEGRWTDNGQPLTLAEGRTVMPMLDQAEQAIVARLLPSHALD 98
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BLAST of mRNA_L-elsbetiae_contig10727.677.1 vs. uniprot
Match: D7G3W3_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W3_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 2.980e-8
Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 0 
Query:   12 MTNEGRWTDNGQPLTLAEGRTVMPMMDQVEQAIVARLLPSQA 53
            M N GRWTDNGQPL LAEGRTV+PM+ Q +QA  A LLPS A
Sbjct:  384 MPNGGRWTDNGQPLPLAEGRTVIPMLAQGDQAFFALLLPSHA 425
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10727.677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L8R1_9PHAE7.650e-1586.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3W3_ECTSI2.980e-871.43HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10727contigL-elsbetiae_contig10727:1439..2383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10727.677.1mRNA_L-elsbetiae_contig10727.677.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10727 1439..2383 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10727.677.1 ID=prot_L-elsbetiae_contig10727.677.1|Name=mRNA_L-elsbetiae_contig10727.677.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=155bp
VVAAAGGGGGGMTNEGRWTDNGQPLTLAEGRTVMPMMDQVEQAIVARLLP
SQAAEHQAGAGAGAGAAAANPGAGAGAGGGSAGEEEKQSAEGQAAAPSSE
AGAESRSVNAGATAGAADEPVAGAAAAAAAAAAAAVGGSGGGGGSHNADD
LQLLQ
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