prot_L-elsbetiae_contig10673.635.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10673.635.1
Unique Nameprot_L-elsbetiae_contig10673.635.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length300
Homology
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BLAST of mRNA_L-elsbetiae_contig10673.635.1 vs. uniprot
Match: D8LQK9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQK9_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 2.320e-72
Identity = 179/328 (54.57%), Postives = 205/328 (62.50%), Query Frame = 0 
Query:    1 MESASKLFKEAALQIKIVVVELAGEHEPNTVWRVNPEAFESLPENRKVMMLRHLRSLVVAYDHLSDDMRRDLTTALEIIKNREVLHMMGKYCVQSEAAEDRRREAKLASADERLKIGTRRPS------------------------ATRQNAASGRRTPPVGTRASTXXXXXXXXXXXXXXXXXXGCAFTPLRSGGTADSXXXXXXXXXXX---RASPPFGSGTGSRKAPLSTPRSTRSAXXXXXXXXXXXXXGMSGSRVSRGVASQSRGRRDTVAAAAAEGGGSSANKHRLSKSPVTRSRP-GWRSKSPM----RTVRRTSQSPAPR 296
            M+SA KLFKEAALQIKI+VVELAGEHEPNTVWRVN   F+ LPENRKVM LRHLRSLVVAYDHLSD+MRRDLTTALEIIKNREVL+MMGKYC+Q+EAAE++R EAKLA+ADERLK+G RRPS                         TRQ+   GRR+PP+G RAS                       TP+RS G A+S              RASPP GSG  SRKAPL TPRS RS              G+ GS + RGVAS SR RR++ A  A  G  SSA + R S+SP+ + RP G RSKSP+    R  RR S+S  PR
Sbjct: 1069 MDSALKLFKEAALQIKIIVVELAGEHEPNTVWRVNQSLFKGLPENRKVMTLRHLRSLVVAYDHLSDEMRRDLTTALEIIKNREVLNMMGKYCIQAEAAEEKRWEAKLATADERLKVG-RRPSDMLGSSVRKARLRSALHQASCLGNGTRQSITPGRRSPPMGIRASFSEPSPPSLARGGLGTPT---TTTPVRSNGAAESPGSGGSNGGNNVGGRASPPLGSG--SRKAPLITPRSGRSTATPPG--------GVGGSGIPRGVASHSR-RRESFAVEAEAG--SSAMEDRRSRSPMFKRRPAGGRSKSPVTARVRGTRRVSRSLTPR 1379
[Close]
BLAST of mRNA_L-elsbetiae_contig10673.635.1 vs. uniprot
Match: F0XY39_AURAN (Calponin-homology (CH) domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY39_AURAN)

HSP 1 Score: 58.5 bits (140), Expect = 7.160e-6
Identity = 36/106 (33.96%), Postives = 62/106 (58.49%), Query Frame = 0 
Query:    5 SKLFKEAALQIKIVVVELAGEHEPN-TVWRV--NPEAFESLPENRKVMMLRHLRSLVVAYDHLSDDMRRDLTTALEIIKNREVLHMMGKYCVQSEAAEDRRREAKL 107
            +KLFK A L++K VVV +   ++ +   W       +F ++  +   ++L HLR+L VAYD+++ D +R+LTT  E++ N + L  + K+CV S+      RE +L
Sbjct:  469 AKLFKHAHLKVKEVVVRVTRSNQRSGRHWEPFHGDASFATVQPHELALILTHLRNLAVAYDNMTADEKRELTTVRELVVNLDWLCALAKHCVASDERRYADRERRL 574
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10673.635.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQK9_ECTSI2.320e-7254.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F0XY39_AURAN7.160e-633.96Calponin-homology (CH) domain-containing protein n... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10673contigL-elsbetiae_contig10673:1360..4738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10673.635.1mRNA_L-elsbetiae_contig10673.635.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10673 544..4793 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10673.635.1 ID=prot_L-elsbetiae_contig10673.635.1|Name=mRNA_L-elsbetiae_contig10673.635.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=300bp
MESASKLFKEAALQIKIVVVELAGEHEPNTVWRVNPEAFESLPENRKVMM
LRHLRSLVVAYDHLSDDMRRDLTTALEIIKNREVLHMMGKYCVQSEAAED
RRREAKLASADERLKIGTRRPSATRQNAASGRRTPPVGTRASTTNPTSSS
KGAASSSPPPPGCAFTPLRSGGTADSPSSNGGEGGGGRASPPFGSGTGSR
KAPLSTPRSTRSADGSGNNVSTPAGGGMSGSRVSRGVASQSRGRRDTVAA
AAAEGGGSSANKHRLSKSPVTRSRPGWRSKSPMRTVRRTSQSPAPRSKK*
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