prot_L-elsbetiae_contig10527.519.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10527.519.1
Unique Nameprot_L-elsbetiae_contig10527.519.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length139
Homology
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BLAST of mRNA_L-elsbetiae_contig10527.519.1 vs. uniprot
Match: D8LJ04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ04_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 8.870e-25
Identity = 63/133 (47.37%), Postives = 80/133 (60.15%), Query Frame = 0 
Query:    1 MATMFSKRASLATATLLLVLYLAVTNLN---RALLGTGHSENHSAVPVSPEEGLAAARTAAGRDGRGGAGEEWMESWGHDIGFRPGVKLPNTGRTRASWEGVRSDSGSRSPFYGDLQRRHQDWLLRRAEEIRS 130
            MA   S +A++A    LL++ L +T LN   RALL      +    P+           AA   GRG AG+ W ESWG ++G RPGV+LPN GR++  W GVR DSG RSP YG +QR HQ WLL+RAEE+RS
Sbjct:    1 MARRRSNQAAVAATASLLLVGLGLTALNPRNRALLPMVQDSSGGHRPLQESR-------AAAVGGRGEAGQAWPESWGREVGLRPGVRLPNQGRSKVGWAGVRDDSGWRSPHYGKIQRGHQAWLLQRAEEMRS 126
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10527.519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJ04_ECTSI8.870e-2547.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..139
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10527contigL-elsbetiae_contig10527:3208..4614 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10527.519.1mRNA_L-elsbetiae_contig10527.519.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10527 3208..4614 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10527.519.1 ID=prot_L-elsbetiae_contig10527.519.1|Name=mRNA_L-elsbetiae_contig10527.519.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=139bp
MATMFSKRASLATATLLLVLYLAVTNLNRALLGTGHSENHSAVPVSPEEG
LAAARTAAGRDGRGGAGEEWMESWGHDIGFRPGVKLPNTGRTRASWEGVR
SDSGSRSPFYGDLQRRHQDWLLRRAEEIRSGNNDGGIGG
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