prot_L-elsbetiae_contig10527.518.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10527.518.1
Unique Nameprot_L-elsbetiae_contig10527.518.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length212
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10527.518.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 65..83
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 209..212
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 104..188
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..64
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 189..208
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..103
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 84..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10527contigL-elsbetiae_contig10527:2508..3143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10527.518.1mRNA_L-elsbetiae_contig10527.518.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10527 2508..3144 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10527.518.1 ID=prot_L-elsbetiae_contig10527.518.1|Name=mRNA_L-elsbetiae_contig10527.518.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=212bp
CRSIAPPHAPAAGCAPRSWSPWLAPLRAETTPTPIPPQPSSFLSRFLLLL
LLLLLLLLIMVVVVRFPPWPNSPHLPTPARGPPHAAPSGPIVVVVVVAVV
VRVDASSDVALFPAPDCRSHRQPQPRHRDKHPQWPPEGHPDPRSQPPRFL
RRDSCRAPPPSILSPSPQSPPIRHHHLPRTAFPLPGHRSLLGLFPLRALL
PLLSYRFLLGRL
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