prot_L-elsbetiae_contig10505.498.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig10505.498.1
Unique Name	prot_L-elsbetiae_contig10505.498.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	101

Homology

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BLAST of mRNA_L-elsbetiae_contig10505.498.1 vs. uniprot
Match: D7G6X6_ECTSI (RL10P_insert domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6X6_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 4.490e-53
Identity = 92/101 (91.09%), Postives = 99/101 (98.02%), Query Frame = 0

Query:    1 MPRSQRNQKVSLTKTNKKGRELKQGIVSYVRKSVDEYPSLYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSQQDEYQDNLREVSKRLKGQV 101
            MPRSQRNQKVSLTKT+KKGRELKQGIVS VRK VDEYPS+YVFSFVNLRSKLLKEVR+DFR+DSRFFMGKNKVM+LALGKS+QDEYQDNLR+VSKRLKGQV
Sbjct:    1 MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRLDFREDSRFFMGKNKVMILALGKSEQDEYQDNLRQVSKRLKGQV 101

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BLAST of mRNA_L-elsbetiae_contig10505.498.1 vs. uniprot
Match: UPI000A2A4B7E (mRNA turnover protein 4 homolog n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A4B7E)

HSP 1 Score: 115 bits (287), Expect = 3.370e-30
Identity = 62/100 (62.00%), Postives = 81/100 (81.00%), Query Frame = 0

Query:    1 MPRSQRNQKVSLTKTNKKGRELKQGIVSYVRKSVDEYPSLYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSQQDEYQDNLREVSKRLKGQ 100
            MP+S+RN+ VSLT+T KKG E K G++  +++ VD+Y SLYVFS  N+R+  LK+VR +  K SRFF GKNKVM++ALGKS +DEY++NLREVSKRLKGQ
Sbjct:    1 MPKSKRNKIVSLTRTKKKGLETKSGLIKEIQECVDQYKSLYVFSVENMRNSKLKDVR-EXWKHSRFFFGKNKVMIIALGKSAEDEYKENLREVSKRLKGQ 99

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BLAST of mRNA_L-elsbetiae_contig10505.498.1 vs. uniprot
Match: I2CRG5_NANGC (Ribosome assembly factor mrt4 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRG5_NANGC)

HSP 1 Score: 115 bits (287), Expect = 1.090e-29
Identity = 63/101 (62.38%), Postives = 81/101 (80.20%), Query Frame = 0

Query:    1 MPRSQRNQKVSLTKTNKKGRELKQGIVSYVRKSVDEYPSLYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSQQDEYQDNLREVSKRLKGQV 101
            MPRS+R+QKVSLTKT  KG+E K G ++ VR+++D + SLYVFSF ++RS   K+VR+D+R DSRFFMGKNKVM  ALG   +DE++DNLR +SKRL GQV
Sbjct:   22 MPRSRRDQKVSLTKTTSKGKEQKAGTIAKVREALDSFTSLYVFSFQHMRSSKFKDVRIDWR-DSRFFMGKNKVMQKALGLLPEDEFRDNLRFLSKRLSGQV 121

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BLAST of mRNA_L-elsbetiae_contig10505.498.1 vs. uniprot
Match: A0A835Z2W2_9STRA (Ribosome assembly factor mrt4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2W2_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.170e-29
Identity = 57/100 (57.00%), Postives = 78/100 (78.00%), Query Frame = 0

Query:    1 MPRSQRNQKVSLTKTNKKGRELKQGIVSYVRKSVDEYPSLYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSQQDEYQDNLREVSKRLKGQ 100
            MP+S+RN+ VSLT T KKGR LKQ ++  +R  +D +  L+VF + N+RS+L+K+VR+DFR DSRFFMGKN +M  ALG S +DEY DNLR+VS+ ++GQ
Sbjct:    1 MPKSKRNKTVSLTSTAKKGRTLKQAVIKDIRDHIDSHQRLFVFRYDNMRSRLMKDVRLDFRGDSRFFMGKNTIMQRALGTSVEDEYSDNLRQVSRHIRGQ 100

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BLAST of mRNA_L-elsbetiae_contig10505.498.1 vs. uniprot
Match: A0A668AVT8_9TELE (Ribosome assembly factor mrt4 n=2 Tax=Myripristis murdjan TaxID=586833 RepID=A0A668AVT8_9TELE)

HSP 1 Score: 111 bits (277), Expect = 3.280e-28
Identity = 60/101 (59.41%), Postives = 80/101 (79.21%), Query Frame = 0

Query:    1 MPRSQRNQKVSLTKTNKKGRELKQGIVSYVRKSVDEYPSLYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSQQDEYQDNLREVSKRLKGQV 101
            MP+S+R++K+SLTKT KKG ELKQ ++  +RK VD Y +L+VFS  N+R+  LK++R  + K SRFF GKNKVMM+ALGK Q DEY+DNL +VSK L+G+V
Sbjct:    1 MPKSKRDKKISLTKTAKKGLELKQNLMEELRKCVDIYKNLFVFSVANMRNNKLKDIRTAW-KHSRFFFGKNKVMMVALGKGQTDEYKDNLHKVSKHLRGEV 100

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BLAST of mRNA_L-elsbetiae_contig10505.498.1 vs. uniprot
Match: UPI001EE2E93E (mRNA turnover protein 4 homolog n=1 Tax=Equus quagga TaxID=89248 RepID=UPI001EE2E93E)

HSP 1 Score: 108 bits (270), Expect = 3.500e-28
Identity = 58/101 (57.43%), Postives = 79/101 (78.22%), Query Frame = 0

Query:    1 MPRSQRNQKVSLTKTNKKGRELKQGIVSYVRKSVDEYPSLYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSQQDEYQDNLREVSKRLKGQV 101
            MP+S+R++KVSLTKT KKG ELKQ ++  +RK VD Y  L++FS  N+R+  LK++R  + K SR F GKNKVMM+ALG+S  DEY+DNL +VSK+L+G+V
Sbjct:    1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW-KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEV 100

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BLAST of mRNA_L-elsbetiae_contig10505.498.1 vs. uniprot
Match: A0A6V1SP53_HETAK (Ribosome assembly factor mrt4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SP53_HETAK)

HSP 1 Score: 110 bits (275), Expect = 3.880e-28
Identity = 58/101 (57.43%), Postives = 79/101 (78.22%), Query Frame = 0

Query:    1 MPRSQRNQKVSLTKTNKKGRELKQGIVSYVRKSVDEYPSLYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSQQDEYQDNLREVSKRLKGQV 101
            MP+S+R++KVSLTKT+ KGR+ KQ +V  VR+++DE+ +LY F F N+RS   KE R D+R DSRFF+GKNK+M +ALG++ +DEYQD LR +SK L G V
Sbjct:    1 MPKSKRDKKVSLTKTDSKGRQQKQKMVQKVREAIDEFDALYTFRFDNMRSNNFKECRADWR-DSRFFLGKNKLMQIALGRTPEDEYQDGLRSISKELVGNV 100

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BLAST of mRNA_L-elsbetiae_contig10505.498.1 vs. uniprot
Match: A0A7J8A980_PIPKU (MRT4-like protein, ribosome maturation factor n=1 Tax=Pipistrellus kuhlii TaxID=59472 RepID=A0A7J8A980_PIPKU)

HSP 1 Score: 108 bits (269), Expect = 4.690e-28
Identity = 58/101 (57.43%), Postives = 79/101 (78.22%), Query Frame = 0

Query:    1 MPRSQRNQKVSLTKTNKKGRELKQGIVSYVRKSVDEYPSLYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSQQDEYQDNLREVSKRLKGQV 101
            MP+S+R++KVSLTKT KKG ELKQ ++  +RK VD Y  L++FS  N+R+  LK++R  + K SR F GKNKVMM+ALG+S  DEY+DNL +VSK+L+G+V
Sbjct:    1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW-KHSRMFFGKNKVMMVALGRSPADEYKDNLHQVSKKLRGEV 100

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BLAST of mRNA_L-elsbetiae_contig10505.498.1 vs. uniprot
Match: A0A8C4YWY6_GADMO (Ribosome assembly factor mrt4 n=2 Tax=Gadus morhua TaxID=8049 RepID=A0A8C4YWY6_GADMO)

HSP 1 Score: 110 bits (276), Expect = 5.670e-28
Identity = 60/101 (59.41%), Postives = 79/101 (78.22%), Query Frame = 0

Query:    1 MPRSQRNQKVSLTKTNKKGRELKQGIVSYVRKSVDEYPSLYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSQQDEYQDNLREVSKRLKGQV 101
            MP+S+R++KVSLTKT KKG E KQ ++  VRK VD Y +L++FS  N+R+  LK++R  + K SRFF GKNKVMM+ALGK + DEY+DNL +VSK LKG+V
Sbjct:    1 MPKSKRDKKVSLTKTTKKGLESKQNLIEEVRKCVDVYQNLFIFSVANMRNNKLKDIRTAW-KHSRFFFGKNKVMMVALGKGRTDEYKDNLHKVSKLLKGEV 100

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BLAST of mRNA_L-elsbetiae_contig10505.498.1 vs. uniprot
Match: A0A6P8HBI4_ACTTE (Ribosome assembly factor mrt4 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HBI4_ACTTE)

HSP 1 Score: 110 bits (274), Expect = 5.750e-28
Identity = 59/100 (59.00%), Postives = 79/100 (79.00%), Query Frame = 0

Query:    1 MPRSQRNQKVSLTKTNKKGRELKQGIVSYVRKSVDEYPSLYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSQQDEYQDNLREVSKRLKGQ 100
            MP+S+RN+ VSLT+T KKG E K G+V  V+  +DEY  +YVFS  N+R+  LK+VR ++ K SRFF GKNKVM++ALGK+ +DEY++NL E+SKRLKGQ
Sbjct:    1 MPKSKRNKIVSLTRTKKKGLETKSGLVKEVQDCIDEYKDIYVFSVENMRNSKLKDVREEW-KHSRFFFGKNKVMIIALGKTPEDEYRENLHELSKRLKGQ 99

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig10505.498.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig10505.498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G6X6_ECTSI	4.490e-53	91.09	RL10P_insert domain-containing protein n=2 Tax=Ect...	[more]
UPI000A2A4B7E	3.370e-30	62.00	mRNA turnover protein 4 homolog n=1 Tax=Exaiptasia...	[more]
I2CRG5_NANGC	1.090e-29	62.38	Ribosome assembly factor mrt4 (Fragment) n=1 Tax=N...	[more]
A0A835Z2W2_9STRA	1.170e-29	57.00	Ribosome assembly factor mrt4 n=1 Tax=Tribonema mi...	[more]
A0A668AVT8_9TELE	3.280e-28	59.41	Ribosome assembly factor mrt4 n=2 Tax=Myripristis ...	[more]
UPI001EE2E93E	3.500e-28	57.43	mRNA turnover protein 4 homolog n=1 Tax=Equus quag...	[more]
A0A6V1SP53_HETAK	3.880e-28	57.43	Ribosome assembly factor mrt4 n=1 Tax=Heterosigma ...	[more]
A0A7J8A980_PIPKU	4.690e-28	57.43	MRT4-like protein, ribosome maturation factor n=1 ...	[more]
A0A8C4YWY6_GADMO	5.670e-28	59.41	Ribosome assembly factor mrt4 n=2 Tax=Gadus morhua...	[more]
A0A6P8HBI4_ACTTE	5.750e-28	59.00	Ribosome assembly factor mrt4 n=1 Tax=Actinia tene...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.1730		coord: 26..101 e-value: 3.2E-22 score: 80.6
None	No IPR available	PANTHER	PTHR45841	FAMILY NOT NAMED	coord: 1..101
None	No IPR available	SUPERFAMILY	160369	Ribosomal protein L10-like	coord: 20..90
IPR001790	Ribosomal protein L10P	PFAM	PF00466	Ribosomal_L10	coord: 19..101 e-value: 9.0E-16 score: 57.9

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig10505	contig	L-elsbetiae_contig10505:6012..6314 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig10505.498.1	mRNA_L-elsbetiae_contig10505.498.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig10505 6012..6314 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig10505.498.1 ID=prot_L-elsbetiae_contig10505.498.1|Name=mRNA_L-elsbetiae_contig10505.498.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=101bp
MPRSQRNQKVSLTKTNKKGRELKQGIVSYVRKSVDEYPSLYVFSFVNLRS
KLLKEVRMDFRKDSRFFMGKNKVMMLALGKSQQDEYQDNLREVSKRLKGQ
V

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001790	Ribosomal_L10P