prot_L-elsbetiae_contig10469.462.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10469.462.1
Unique Nameprot_L-elsbetiae_contig10469.462.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length92
Homology
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BLAST of mRNA_L-elsbetiae_contig10469.462.1 vs. uniprot
Match: A0A6H5KF55_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF55_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 4.000e-15
Identity = 49/98 (50.00%), Postives = 61/98 (62.24%), Query Frame = 0 
Query:    1 GEAPGS-KKRPLSAVGQSQSPEHAQQAPAGKRRLDDEGASXXXXXXXXXXXXXXXXDE-----VENVLSEDIPRRARWWNSVALVPRFVGTILDLLHE 92
            G+A GS KKRPLSA+G        ++A +GKRR+ ++GA                  +     VE+VL E++PRR RWWNSVALVPRFVGTILDLLHE
Sbjct: 1017 GDATGSSKKRPLSALGLLPPSGCRREAASGKRRVGEQGAKVPSSLSSLSSLSDDGQPQPSSADVEDVLFEEVPRRLRWWNSVALVPRFVGTILDLLHE 1114
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BLAST of mRNA_L-elsbetiae_contig10469.462.1 vs. uniprot
Match: D7FK75_ECTSI (Ubiquitin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK75_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 4.870e-14
Identity = 49/100 (49.00%), Postives = 60/100 (60.00%), Query Frame = 0 
Query:    1 GEAPGS-KKRPLSAVGQSQSPEHAQQAPAGKRRLDDEGA-------SXXXXXXXXXXXXXXXXDEVENVLSEDIPRRARWWNSVALVPRFVGTILDLLHE 92
            G+A GS KKRPLSA+G        ++A +GKRR+ ++GA       S                 +VE+VL E+ PRR RWWN VALVPRFVGTILDLLHE
Sbjct: 2669 GDAAGSSKKRPLSALGVLAPSGCRREAASGKRRVGEQGARVPSSPSSLSSVSDDGQPQVQPSSADVESVLFEEAPRRLRWWNCVALVPRFVGTILDLLHE 2768
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10469.462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KF55_9PHAE4.000e-1550.00USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FK75_ECTSI4.870e-1449.00Ubiquitin domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10469contigL-elsbetiae_contig10469:4533..5359 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10469.462.1mRNA_L-elsbetiae_contig10469.462.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10469 4533..5359 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10469.462.1 ID=prot_L-elsbetiae_contig10469.462.1|Name=mRNA_L-elsbetiae_contig10469.462.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp
GEAPGSKKRPLSAVGQSQSPEHAQQAPAGKRRLDDEGASSPQDQQPEERR
QQAEDDEVENVLSEDIPRRARWWNSVALVPRFVGTILDLLHE
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